EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000024271 (Gene tree)
Gene ID: 102922064
Gene Symbol: -
Alias: -
Full Name: argonaute 3%2C RISC catalytic component
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 101472 bases
Position: chrKI615453.1:2256565-2358036
Accession: 102922064
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000028854	PAZ	PF02170.22	9.4e-28	1	1
ENSPEMP00000028854	Piwi	PF02171.17	7.2e-91	1	2
ENSPEMP00000028854	Piwi	PF02171.17	7.2e-91	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000033281	-	2478	XM_015998638	ENSPEMP00000028854	825 (aa)	XP_015854124	-

Gene Model

Click here to download ENSPEMG00000024271's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000024271's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000024271	-	83	71.983	ENSPEMG00000015845	-	96	71.983
ENSPEMG00000024271	-	99	70.747	ENSPEMG00000022651	-	98	70.747
ENSPEMG00000024271	-	99	80.565	ENSPEMG00000023313	Ago1	99	79.722
ENSPEMG00000024271	-	99	76.540	ENSPEMG00000008137	Ago2	98	76.540

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000024271	-	100	94.379	ENSG00000126070	AGO3	99	94.379	Homo_sapiens
ENSPEMG00000024271	-	100	92.389	ENSAPOG00000024260	ago3a	99	92.389	Acanthochromis_polyacanthus
ENSPEMG00000024271	-	100	89.895	ENSAPOG00000014494	-	99	89.895	Acanthochromis_polyacanthus
ENSPEMG00000024271	-	100	94.379	ENSAMEG00000000497	AGO3	99	94.379	Ailuropoda_melanoleuca
ENSPEMG00000024271	-	92	90.518	ENSACIG00000019272	AGO3	100	90.518	Amphilophus_citrinellus
ENSPEMG00000024271	-	92	92.541	ENSACIG00000005333	ago3a	100	92.541	Amphilophus_citrinellus
ENSPEMG00000024271	-	55	90.063	ENSAOCG00000022538	-	90	90.063	Amphiprion_ocellaris
ENSPEMG00000024271	-	93	85.938	ENSAOCG00000017051	-	100	85.938	Amphiprion_ocellaris
ENSPEMG00000024271	-	100	92.389	ENSAOCG00000017642	ago3a	99	92.389	Amphiprion_ocellaris
ENSPEMG00000024271	-	100	91.638	ENSAPEG00000004375	ago3a	99	91.638	Amphiprion_percula
ENSPEMG00000024271	-	100	89.547	ENSAPEG00000020249	-	99	89.547	Amphiprion_percula
ENSPEMG00000024271	-	100	91.638	ENSATEG00000008458	ago3a	99	91.638	Anabas_testudineus
ENSPEMG00000024271	-	100	89.431	ENSATEG00000005160	-	99	89.431	Anabas_testudineus
ENSPEMG00000024271	-	100	94.035	ENSAPLG00000009642	AGO3	99	94.035	Anas_platyrhynchos
ENSPEMG00000024271	-	100	94.028	ENSACAG00000003385	AGO3	99	94.028	Anolis_carolinensis
ENSPEMG00000024271	-	99	97.426	ENSANAG00000037735	AGO3	100	97.426	Aotus_nancymaae
ENSPEMG00000024271	-	100	89.199	ENSACLG00000001965	-	99	89.199	Astatotilapia_calliptera
ENSPEMG00000024271	-	100	92.389	ENSACLG00000000963	ago3a	99	92.389	Astatotilapia_calliptera
ENSPEMG00000024271	-	92	94.315	ENSAMXG00000002198	ago3a	100	94.315	Astyanax_mexicanus
ENSPEMG00000024271	-	92	89.381	ENSAMXG00000009571	ago3b	100	89.381	Astyanax_mexicanus
ENSPEMG00000024271	-	100	94.379	ENSBTAG00000018324	AGO3	99	94.379	Bos_taurus
ENSPEMG00000024271	-	100	94.379	ENSCJAG00000031580	AGO3	99	94.379	Callithrix_jacchus
ENSPEMG00000024271	-	100	94.262	ENSCAFG00000024682	AGO3	99	94.262	Canis_familiaris
ENSPEMG00000024271	-	100	94.379	ENSCAFG00020009051	AGO3	99	93.787	Canis_lupus_dingo
ENSPEMG00000024271	-	100	94.379	ENSCHIG00000011536	AGO3	99	94.379	Capra_hircus
ENSPEMG00000024271	-	82	99.258	ENSTSYG00000011897	AGO3	93	99.258	Carlito_syrichta
ENSPEMG00000024271	-	94	76.865	ENSCAPG00000011589	AGO3	100	77.197	Cavia_aperea
ENSPEMG00000024271	-	100	91.844	ENSCPOG00000030524	AGO3	99	91.844	Cavia_porcellus
ENSPEMG00000024271	-	100	94.379	ENSCCAG00000034189	AGO3	99	94.379	Cebus_capucinus
ENSPEMG00000024271	-	100	94.379	ENSCATG00000029748	AGO3	99	94.379	Cercocebus_atys
ENSPEMG00000024271	-	100	94.379	ENSCLAG00000013184	AGO3	99	94.379	Chinchilla_lanigera
ENSPEMG00000024271	-	100	94.379	ENSCSAG00000001092	AGO3	99	94.379	Chlorocebus_sabaeus
ENSPEMG00000024271	-	92	100.000	ENSCHOG00000011621	AGO3	91	100.000	Choloepus_hoffmanni
ENSPEMG00000024271	-	100	94.145	ENSCPBG00000018583	AGO3	99	94.145	Chrysemys_picta_bellii
ENSPEMG00000024271	-	100	94.379	ENSCANG00000033258	AGO3	99	94.379	Colobus_angolensis_palliatus
ENSPEMG00000024271	-	100	94.731	ENSCGRG00001024614	Ago3	99	94.731	Cricetulus_griseus_chok1gshd
ENSPEMG00000024271	-	100	94.731	ENSCGRG00000010670	Ago3	99	94.731	Cricetulus_griseus_crigri
ENSPEMG00000024271	-	92	85.144	ENSCSEG00000009788	-	100	85.144	Cynoglossus_semilaevis
ENSPEMG00000024271	-	92	92.162	ENSCSEG00000001040	ago3a	100	92.162	Cynoglossus_semilaevis
ENSPEMG00000024271	-	100	92.037	ENSCVAG00000018224	ago3a	99	92.037	Cyprinodon_variegatus
ENSPEMG00000024271	-	53	87.556	ENSCVAG00000011229	-	97	87.556	Cyprinodon_variegatus
ENSPEMG00000024271	-	100	91.521	ENSDARG00000059888	ago3a	99	91.521	Danio_rerio
ENSPEMG00000024271	-	100	90.398	ENSDARG00000063079	ago3b	99	90.398	Danio_rerio
ENSPEMG00000024271	-	88	93.617	ENSDNOG00000008106	AGO3	99	93.617	Dasypus_novemcinctus
ENSPEMG00000024271	-	100	94.028	ENSDORG00000009414	Ago3	99	94.028	Dipodomys_ordii
ENSPEMG00000024271	-	85	88.102	ENSETEG00000007639	AGO3	89	88.102	Echinops_telfairi
ENSPEMG00000024271	-	100	94.379	ENSEASG00005012089	AGO3	99	94.379	Equus_asinus_asinus
ENSPEMG00000024271	-	100	94.379	ENSECAG00000023972	AGO3	99	94.379	Equus_caballus
ENSPEMG00000024271	-	100	81.967	ENSEEUG00000007058	AGO3	99	81.967	Erinaceus_europaeus
ENSPEMG00000024271	-	100	89.220	ENSELUG00000001774	-	99	89.220	Esox_lucius
ENSPEMG00000024271	-	92	89.507	ENSELUG00000016755	ago3a	100	89.507	Esox_lucius
ENSPEMG00000024271	-	72	92.971	ENSFCAG00000000747	-	100	92.971	Felis_catus
ENSPEMG00000024271	-	100	93.918	ENSFALG00000000802	AGO3	99	93.918	Ficedula_albicollis
ENSPEMG00000024271	-	99	94.373	ENSFDAG00000012874	AGO3	100	94.373	Fukomys_damarensis
ENSPEMG00000024271	-	100	88.850	ENSFHEG00000016205	-	99	88.850	Fundulus_heteroclitus
ENSPEMG00000024271	-	83	77.236	ENSGMOG00000019418	-	89	77.236	Gadus_morhua
ENSPEMG00000024271	-	98	91.976	ENSGMOG00000013069	-	100	91.976	Gadus_morhua
ENSPEMG00000024271	-	100	94.145	ENSGALG00000043711	AGO3	100	94.201	Gallus_gallus
ENSPEMG00000024271	-	100	92.272	ENSGAFG00000009808	ago3a	99	92.272	Gambusia_affinis
ENSPEMG00000024271	-	100	88.966	ENSGAFG00000015911	-	100	87.980	Gambusia_affinis
ENSPEMG00000024271	-	98	90.539	ENSGACG00000002455	AGO3	100	90.539	Gasterosteus_aculeatus
ENSPEMG00000024271	-	93	91.970	ENSGACG00000012453	ago3a	100	91.970	Gasterosteus_aculeatus
ENSPEMG00000024271	-	100	94.145	ENSGAGG00000012887	AGO3	99	94.145	Gopherus_agassizii
ENSPEMG00000024271	-	100	94.379	ENSGGOG00000036711	AGO3	99	94.379	Gorilla_gorilla
ENSPEMG00000024271	-	88	90.234	ENSHBUG00000010542	ago3a	96	90.234	Haplochromis_burtoni
ENSPEMG00000024271	-	100	89.199	ENSHBUG00000017794	-	99	89.199	Haplochromis_burtoni
ENSPEMG00000024271	-	100	94.379	ENSHGLG00000012538	AGO3	99	94.379	Heterocephalus_glaber_female
ENSPEMG00000024271	-	99	94.000	ENSHGLG00100006043	AGO3	100	94.000	Heterocephalus_glaber_male
ENSPEMG00000024271	-	100	88.734	ENSHCOG00000011851	AGO3	99	88.734	Hippocampus_comes
ENSPEMG00000024271	-	87	92.412	ENSHCOG00000005674	ago3a	97	92.412	Hippocampus_comes
ENSPEMG00000024271	-	100	90.244	ENSIPUG00000008548	ago3b	99	90.244	Ictalurus_punctatus
ENSPEMG00000024271	-	99	87.222	ENSIPUG00000023241	ago3a	99	87.222	Ictalurus_punctatus
ENSPEMG00000024271	-	100	89.578	ENSSTOG00000025904	AGO3	99	89.578	Ictidomys_tridecemlineatus
ENSPEMG00000024271	-	100	94.262	ENSJJAG00000017436	Ago3	99	94.262	Jaculus_jaculus
ENSPEMG00000024271	-	100	91.638	ENSKMAG00000019534	ago3a	99	91.638	Kryptolebias_marmoratus
ENSPEMG00000024271	-	92	92.541	ENSLBEG00000007592	ago3a	100	92.541	Labrus_bergylta
ENSPEMG00000024271	-	100	88.991	ENSLBEG00000016073	-	99	88.991	Labrus_bergylta
ENSPEMG00000024271	-	100	94.379	ENSLAFG00000002744	AGO3	99	94.379	Loxodonta_africana
ENSPEMG00000024271	-	100	94.379	ENSMFAG00000035610	AGO3	99	94.379	Macaca_fascicularis
ENSPEMG00000024271	-	100	94.379	ENSMMUG00000006252	AGO3	99	94.379	Macaca_mulatta
ENSPEMG00000024271	-	100	94.379	ENSMNEG00000039518	AGO3	99	94.379	Macaca_nemestrina
ENSPEMG00000024271	-	100	94.379	ENSMLEG00000027912	AGO3	99	94.379	Mandrillus_leucophaeus
ENSPEMG00000024271	-	100	89.199	ENSMAMG00000005697	-	99	89.199	Mastacembelus_armatus
ENSPEMG00000024271	-	100	87.086	ENSMAMG00000008440	ago3a	100	91.783	Mastacembelus_armatus
ENSPEMG00000024271	-	100	89.315	ENSMZEG00005026243	-	99	89.315	Maylandia_zebra
ENSPEMG00000024271	-	100	92.389	ENSMZEG00005007949	ago3a	99	92.389	Maylandia_zebra
ENSPEMG00000024271	-	100	94.035	ENSMGAG00000003773	AGO3	99	94.035	Meleagris_gallopavo
ENSPEMG00000024271	-	93	83.504	ENSMAUG00000010128	Ago3	96	83.632	Mesocricetus_auratus
ENSPEMG00000024271	-	100	94.379	ENSMICG00000016158	AGO3	99	94.379	Microcebus_murinus
ENSPEMG00000024271	-	99	91.794	ENSMOCG00000020568	Ago3	99	91.794	Microtus_ochrogaster
ENSPEMG00000024271	-	92	89.386	ENSMMOG00000014065	-	100	89.386	Mola_mola
ENSPEMG00000024271	-	92	88.791	ENSMMOG00000018446	ago3a	100	88.791	Mola_mola
ENSPEMG00000024271	-	100	93.911	ENSMODG00000017869	AGO3	99	93.911	Monodelphis_domestica
ENSPEMG00000024271	-	99	92.261	ENSMALG00000010895	ago3a	99	92.261	Monopterus_albus
ENSPEMG00000024271	-	99	88.639	ENSMALG00000014658	-	99	88.639	Monopterus_albus
ENSPEMG00000024271	-	100	94.145	MGP_CAROLIEiJ_G0026477	Ago3	99	94.145	Mus_caroli
ENSPEMG00000024271	-	100	93.911	ENSMUSG00000028842	Ago3	99	93.911	Mus_musculus
ENSPEMG00000024271	-	100	94.145	MGP_PahariEiJ_G0028808	Ago3	99	94.145	Mus_pahari
ENSPEMG00000024271	-	100	94.262	MGP_SPRETEiJ_G0027456	Ago3	99	94.262	Mus_spretus
ENSPEMG00000024271	-	72	92.812	ENSMLUG00000009668	AGO3	100	92.812	Myotis_lucifugus
ENSPEMG00000024271	-	100	94.262	ENSNGAG00000012607	Ago3	99	94.262	Nannospalax_galili
ENSPEMG00000024271	-	92	83.522	ENSNBRG00000010936	ago3a	100	83.522	Neolamprologus_brichardi
ENSPEMG00000024271	-	92	90.265	ENSNBRG00000015687	AGO3	100	90.265	Neolamprologus_brichardi
ENSPEMG00000024271	-	99	90.035	ENSNLEG00000027092	AGO3	99	90.035	Nomascus_leucogenys
ENSPEMG00000024271	-	87	79.692	ENSMEUG00000009200	AGO3	91	79.692	Notamacropus_eugenii
ENSPEMG00000024271	-	79	100.000	ENSOPRG00000012344	AGO3	75	100.000	Ochotona_princeps
ENSPEMG00000024271	-	100	94.379	ENSODEG00000005161	AGO3	100	94.373	Octodon_degus
ENSPEMG00000024271	-	100	92.272	ENSONIG00000016349	ago3a	99	92.272	Oreochromis_niloticus
ENSPEMG00000024271	-	100	90.164	ENSONIG00000013760	AGO3	99	90.164	Oreochromis_niloticus
ENSPEMG00000024271	-	99	94.090	ENSOANG00000002078	AGO3	100	94.090	Ornithorhynchus_anatinus
ENSPEMG00000024271	-	100	94.379	ENSOCUG00000006255	AGO3	99	94.379	Oryctolagus_cuniculus
ENSPEMG00000024271	-	92	92.668	ENSORLG00000015016	ago3a	100	92.668	Oryzias_latipes
ENSPEMG00000024271	-	100	88.056	ENSORLG00000009091	-	99	88.056	Oryzias_latipes
ENSPEMG00000024271	-	100	88.056	ENSORLG00020015386	AGO3	99	88.056	Oryzias_latipes_hni
ENSPEMG00000024271	-	92	92.668	ENSORLG00015000087	ago3a	100	92.668	Oryzias_latipes_hsok
ENSPEMG00000024271	-	100	87.939	ENSORLG00015006205	-	99	87.939	Oryzias_latipes_hsok
ENSPEMG00000024271	-	100	88.407	ENSOMEG00000022085	-	99	88.407	Oryzias_melastigma
ENSPEMG00000024271	-	92	92.541	ENSOMEG00000020588	ago3a	100	92.541	Oryzias_melastigma
ENSPEMG00000024271	-	100	94.379	ENSOGAG00000010290	AGO3	99	94.379	Otolemur_garnettii
ENSPEMG00000024271	-	100	94.379	ENSOARG00000019609	AGO3	99	94.379	Ovis_aries
ENSPEMG00000024271	-	100	94.379	ENSPPAG00000031959	AGO3	99	94.379	Pan_paniscus
ENSPEMG00000024271	-	100	94.379	ENSPPRG00000005934	AGO3	99	94.379	Panthera_pardus
ENSPEMG00000024271	-	99	94.373	ENSPTIG00000001029	AGO3	99	94.373	Panthera_tigris_altaica
ENSPEMG00000024271	-	100	94.379	ENSPTRG00000000529	AGO3	99	94.379	Pan_troglodytes
ENSPEMG00000024271	-	100	94.379	ENSPANG00000007682	AGO3	99	94.379	Papio_anubis
ENSPEMG00000024271	-	96	93.888	ENSPSIG00000007162	AGO3	99	93.888	Pelodiscus_sinensis
ENSPEMG00000024271	-	92	90.657	ENSPMGG00000013215	-	100	90.657	Periophthalmus_magnuspinnatus
ENSPEMG00000024271	-	92	92.513	ENSPMGG00000024101	ago3a	100	92.513	Periophthalmus_magnuspinnatus
ENSPEMG00000024271	-	100	93.794	ENSPCIG00000000198	AGO3	99	93.794	Phascolarctos_cinereus
ENSPEMG00000024271	-	99	89.591	ENSPFOG00000006684	-	99	89.591	Poecilia_formosa
ENSPEMG00000024271	-	92	85.571	ENSPLAG00000017432	-	100	85.571	Poecilia_latipinna
ENSPEMG00000024271	-	100	91.638	ENSPLAG00000002848	ago3a	99	91.638	Poecilia_latipinna
ENSPEMG00000024271	-	100	89.199	ENSPMEG00000004268	-	99	89.199	Poecilia_mexicana
ENSPEMG00000024271	-	100	92.272	ENSPMEG00000001806	ago3a	99	92.272	Poecilia_mexicana
ENSPEMG00000024271	-	86	85.371	ENSPREG00000009084	-	99	85.371	Poecilia_reticulata
ENSPEMG00000024271	-	100	91.521	ENSPREG00000006604	ago3a	99	91.521	Poecilia_reticulata
ENSPEMG00000024271	-	100	94.379	ENSPPYG00000001550	AGO3	99	94.379	Pongo_abelii
ENSPEMG00000024271	-	99	81.382	ENSPCAG00000010090	AGO3	100	81.382	Procavia_capensis
ENSPEMG00000024271	-	100	94.379	ENSPCOG00000028390	AGO3	99	94.379	Propithecus_coquereli
ENSPEMG00000024271	-	100	94.028	ENSPVAG00000005086	AGO3	99	94.028	Pteropus_vampyrus
ENSPEMG00000024271	-	100	90.047	ENSPNYG00000004707	-	99	90.047	Pundamilia_nyererei
ENSPEMG00000024271	-	100	91.521	ENSPNYG00000012510	ago3a	99	91.521	Pundamilia_nyererei
ENSPEMG00000024271	-	100	91.920	ENSPNAG00000008033	ago3a	99	91.920	Pygocentrus_nattereri
ENSPEMG00000024271	-	99	91.304	ENSPNAG00000008825	ago3b	99	91.304	Pygocentrus_nattereri
ENSPEMG00000024271	-	100	94.614	ENSRNOG00000034269	Ago3	99	94.614	Rattus_norvegicus
ENSPEMG00000024271	-	100	94.379	ENSRBIG00000043774	AGO3	99	94.379	Rhinopithecus_bieti
ENSPEMG00000024271	-	100	94.379	ENSRROG00000042180	AGO3	99	94.379	Rhinopithecus_roxellana
ENSPEMG00000024271	-	100	94.379	ENSSBOG00000029981	AGO3	100	94.185	Saimiri_boliviensis_boliviensis
ENSPEMG00000024271	-	92	90.013	ENSSFOG00015000162	ago3a	100	90.013	Scleropages_formosus
ENSPEMG00000024271	-	100	92.389	ENSSMAG00000002775	ago3a	100	91.940	Scophthalmus_maximus
ENSPEMG00000024271	-	100	90.012	ENSSMAG00000001969	-	99	90.012	Scophthalmus_maximus
ENSPEMG00000024271	-	100	90.244	ENSSDUG00000008069	-	100	90.518	Seriola_dumerili
ENSPEMG00000024271	-	100	92.389	ENSSDUG00000010918	ago3a	99	92.389	Seriola_dumerili
ENSPEMG00000024271	-	100	90.244	ENSSLDG00000006859	-	100	91.150	Seriola_lalandi_dorsalis
ENSPEMG00000024271	-	92	92.668	ENSSLDG00000000463	ago3a	100	92.668	Seriola_lalandi_dorsalis
ENSPEMG00000024271	-	92	86.280	ENSSARG00000011549	AGO3	92	86.280	Sorex_araneus
ENSPEMG00000024271	-	99	93.669	ENSSPUG00000000753	AGO3	99	93.669	Sphenodon_punctatus
ENSPEMG00000024271	-	100	88.736	ENSSPAG00000015728	-	99	88.736	Stegastes_partitus
ENSPEMG00000024271	-	100	91.638	ENSSPAG00000019104	ago3a	99	91.638	Stegastes_partitus
ENSPEMG00000024271	-	100	96.000	ENSSSCG00000003630	AGO3	100	96.000	Sus_scrofa
ENSPEMG00000024271	-	74	92.824	ENSTGUG00000014986	AGO3	100	92.824	Taeniopygia_guttata
ENSPEMG00000024271	-	99	89.044	ENSTRUG00000012737	-	99	89.044	Takifugu_rubripes
ENSPEMG00000024271	-	92	90.771	ENSTRUG00000005992	ago3a	100	90.771	Takifugu_rubripes
ENSPEMG00000024271	-	99	87.104	ENSTNIG00000002635	AGO3	98	87.104	Tetraodon_nigroviridis
ENSPEMG00000024271	-	90	82.520	ENSTBEG00000016565	AGO3	90	82.520	Tupaia_belangeri
ENSPEMG00000024271	-	91	97.938	ENSTTRG00000015092	AGO3	92	97.938	Tursiops_truncatus
ENSPEMG00000024271	-	100	94.379	ENSUAMG00000026574	AGO3	100	93.443	Ursus_americanus
ENSPEMG00000024271	-	99	92.380	ENSVPAG00000007631	AGO3	100	92.380	Vicugna_pacos
ENSPEMG00000024271	-	99	94.438	ENSVVUG00000000362	AGO3	100	94.438	Vulpes_vulpes
ENSPEMG00000024271	-	100	93.450	ENSXETG00000027042	ago3	99	93.450	Xenopus_tropicalis
ENSPEMG00000024271	-	88	88.729	ENSXCOG00000000902	-	99	88.729	Xiphophorus_couchianus
ENSPEMG00000024271	-	80	92.431	ENSXCOG00000007676	ago3a	100	92.431	Xiphophorus_couchianus
ENSPEMG00000024271	-	100	91.521	ENSXMAG00000007141	ago3a	99	91.521	Xiphophorus_maculatus
ENSPEMG00000024271	-	100	89.696	ENSXMAG00000027615	-	99	89.696	Xiphophorus_maculatus