EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000000073 (Gene tree)
Gene ID: -
Gene Symbol: sf3b1
Alias: -
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 17705 bases
Position: chrKI520106.1:86651-104355
Accession: 103156735
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000000080	SF3b1	PF08920.10	6.1e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000000080	-	4089	XM_007578882	ENSPFOP00000000080	1316 (aa)	XP_007578944	A0A087X2S7

Gene Model

Click here to download ENSPFOG00000000073's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000000073's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000000073	sf3b1	100	93.323	ENSG00000115524	SF3B1	100	93.323	Homo_sapiens
ENSPFOG00000000073	sf3b1	100	98.557	ENSAPOG00000011894	sf3b1	100	98.557	Acanthochromis_polyacanthus
ENSPFOG00000000073	sf3b1	99	93.206	ENSAMEG00000013809	SF3B1	99	93.206	Ailuropoda_melanoleuca
ENSPFOG00000000073	sf3b1	100	97.492	ENSACIG00000020910	sf3b1	97	97.492	Amphilophus_citrinellus
ENSPFOG00000000073	sf3b1	100	98.557	ENSAOCG00000004478	sf3b1	100	98.557	Amphiprion_ocellaris
ENSPFOG00000000073	sf3b1	100	98.557	ENSAPEG00000012937	sf3b1	100	98.557	Amphiprion_percula
ENSPFOG00000000073	sf3b1	100	98.632	ENSATEG00000020435	sf3b1	100	98.632	Anabas_testudineus
ENSPFOG00000000073	sf3b1	99	93.650	ENSAPLG00000003993	SF3B1	99	93.650	Anas_platyrhynchos
ENSPFOG00000000073	sf3b1	100	93.470	ENSACAG00000009612	SF3B1	100	93.470	Anolis_carolinensis
ENSPFOG00000000073	sf3b1	100	93.323	ENSANAG00000021577	SF3B1	100	94.692	Aotus_nancymaae
ENSPFOG00000000073	sf3b1	100	97.416	ENSACLG00000023470	sf3b1	100	97.416	Astatotilapia_calliptera
ENSPFOG00000000073	sf3b1	100	96.813	ENSAMXG00000002219	sf3b1	100	96.813	Astyanax_mexicanus
ENSPFOG00000000073	sf3b1	100	93.323	ENSBTAG00000008915	SF3B1	100	93.323	Bos_taurus
ENSPFOG00000000073	sf3b1	99	64.454	WBGene00011605	sftb-1	99	64.602	Caenorhabditis_elegans
ENSPFOG00000000073	sf3b1	100	93.323	ENSCJAG00000003902	SF3B1	100	93.323	Callithrix_jacchus
ENSPFOG00000000073	sf3b1	100	93.323	ENSCAFG00000010826	SF3B1	100	93.323	Canis_familiaris
ENSPFOG00000000073	sf3b1	100	93.323	ENSCAFG00020004750	SF3B1	100	93.323	Canis_lupus_dingo
ENSPFOG00000000073	sf3b1	100	93.323	ENSCHIG00000015226	SF3B1	100	93.323	Capra_hircus
ENSPFOG00000000073	sf3b1	100	93.247	ENSTSYG00000009214	SF3B1	100	93.247	Carlito_syrichta
ENSPFOG00000000073	sf3b1	99	93.151	ENSCAPG00000006547	SF3B1	99	93.151	Cavia_aperea
ENSPFOG00000000073	sf3b1	99	93.272	ENSCPOG00000009353	SF3B1	100	93.272	Cavia_porcellus
ENSPFOG00000000073	sf3b1	100	93.323	ENSCCAG00000020506	SF3B1	100	93.323	Cebus_capucinus
ENSPFOG00000000073	sf3b1	100	93.323	ENSCATG00000035735	SF3B1	100	93.323	Cercocebus_atys
ENSPFOG00000000073	sf3b1	99	93.277	ENSCLAG00000014767	SF3B1	99	93.277	Chinchilla_lanigera
ENSPFOG00000000073	sf3b1	100	93.323	ENSCSAG00000011505	SF3B1	100	93.323	Chlorocebus_sabaeus
ENSPFOG00000000073	sf3b1	76	92.474	ENSCHOG00000009860	SF3B1	76	92.474	Choloepus_hoffmanni
ENSPFOG00000000073	sf3b1	100	93.617	ENSCPBG00000021902	SF3B1	99	94.781	Chrysemys_picta_bellii
ENSPFOG00000000073	sf3b1	68	78.322	ENSCING00000002558	-	99	78.761	Ciona_intestinalis
ENSPFOG00000000073	sf3b1	99	80.150	ENSCSAVG00000002559	-	99	80.150	Ciona_savignyi
ENSPFOG00000000073	sf3b1	100	93.323	ENSCANG00000029415	SF3B1	100	93.323	Colobus_angolensis_palliatus
ENSPFOG00000000073	sf3b1	100	93.323	ENSCGRG00001016990	Sf3b1	100	93.323	Cricetulus_griseus_chok1gshd
ENSPFOG00000000073	sf3b1	100	93.323	ENSCGRG00000005301	Sf3b1	100	93.323	Cricetulus_griseus_crigri
ENSPFOG00000000073	sf3b1	100	93.921	ENSCSEG00000003860	sf3b1	100	93.921	Cynoglossus_semilaevis
ENSPFOG00000000073	sf3b1	96	99.604	ENSCVAG00000003680	sf3b1	99	99.604	Cyprinodon_variegatus
ENSPFOG00000000073	sf3b1	100	96.049	ENSDARG00000056138	sf3b1	100	96.049	Danio_rerio
ENSPFOG00000000073	sf3b1	100	93.252	ENSDNOG00000011754	SF3B1	100	93.252	Dasypus_novemcinctus
ENSPFOG00000000073	sf3b1	99	91.361	ENSDORG00000002399	Sf3b1	100	91.208	Dipodomys_ordii
ENSPFOG00000000073	sf3b1	100	75.678	FBgn0031266	Sf3b1	100	75.678	Drosophila_melanogaster
ENSPFOG00000000073	sf3b1	83	92.216	ENSETEG00000009188	SF3B1	100	92.216	Echinops_telfairi
ENSPFOG00000000073	sf3b1	99	85.899	ENSEBUG00000004325	sf3b1	100	88.630	Eptatretus_burgeri
ENSPFOG00000000073	sf3b1	100	93.323	ENSEASG00005020159	SF3B1	98	93.323	Equus_asinus_asinus
ENSPFOG00000000073	sf3b1	100	93.323	ENSECAG00000021657	SF3B1	98	93.323	Equus_caballus
ENSPFOG00000000073	sf3b1	87	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSPFOG00000000073	sf3b1	100	96.000	ENSELUG00000005977	sf3b1	98	96.000	Esox_lucius
ENSPFOG00000000073	sf3b1	100	93.323	ENSFCAG00000005038	SF3B1	100	93.323	Felis_catus
ENSPFOG00000000073	sf3b1	99	93.573	ENSFALG00000004281	SF3B1	99	93.573	Ficedula_albicollis
ENSPFOG00000000073	sf3b1	100	93.323	ENSFDAG00000017510	SF3B1	100	93.323	Fukomys_damarensis
ENSPFOG00000000073	sf3b1	100	98.328	ENSFHEG00000014333	sf3b1	100	98.328	Fundulus_heteroclitus
ENSPFOG00000000073	sf3b1	100	95.451	ENSGMOG00000006773	sf3b1	100	95.830	Gadus_morhua
ENSPFOG00000000073	sf3b1	100	93.693	ENSGALG00000008038	SF3B1	100	93.693	Gallus_gallus
ENSPFOG00000000073	sf3b1	98	99.614	ENSGAFG00000000704	sf3b1	100	99.614	Gambusia_affinis
ENSPFOG00000000073	sf3b1	100	96.813	ENSGACG00000008839	sf3b1	100	96.813	Gasterosteus_aculeatus
ENSPFOG00000000073	sf3b1	100	92.981	ENSGAGG00000017478	SF3B1	100	92.981	Gopherus_agassizii
ENSPFOG00000000073	sf3b1	99	87.997	ENSGGOG00000009264	SF3B1	99	88.073	Gorilla_gorilla
ENSPFOG00000000073	sf3b1	99	97.489	ENSHBUG00000007705	sf3b1	99	97.489	Haplochromis_burtoni
ENSPFOG00000000073	sf3b1	99	93.277	ENSHGLG00000008285	-	99	93.277	Heterocephalus_glaber_female
ENSPFOG00000000073	sf3b1	99	91.291	ENSHGLG00100005535	-	99	91.291	Heterocephalus_glaber_male
ENSPFOG00000000073	sf3b1	100	97.203	ENSHCOG00000016775	sf3b1	100	97.203	Hippocampus_comes
ENSPFOG00000000073	sf3b1	100	96.583	ENSIPUG00000013171	sf3b1	100	96.583	Ictalurus_punctatus
ENSPFOG00000000073	sf3b1	100	93.323	ENSSTOG00000011034	SF3B1	100	93.323	Ictidomys_tridecemlineatus
ENSPFOG00000000073	sf3b1	99	93.252	ENSJJAG00000010903	Sf3b1	99	93.252	Jaculus_jaculus
ENSPFOG00000000073	sf3b1	100	97.803	ENSKMAG00000004009	sf3b1	100	97.803	Kryptolebias_marmoratus
ENSPFOG00000000073	sf3b1	100	96.960	ENSLBEG00000022208	sf3b1	100	96.960	Labrus_bergylta
ENSPFOG00000000073	sf3b1	99	90.205	ENSLACG00000014832	SF3B1	99	90.281	Latimeria_chalumnae
ENSPFOG00000000073	sf3b1	100	95.238	ENSLOCG00000003899	sf3b1	100	95.238	Lepisosteus_oculatus
ENSPFOG00000000073	sf3b1	100	93.323	ENSLAFG00000001956	SF3B1	100	93.323	Loxodonta_africana
ENSPFOG00000000073	sf3b1	99	93.277	ENSMMUG00000022430	SF3B1	99	93.277	Macaca_mulatta
ENSPFOG00000000073	sf3b1	100	93.323	ENSMNEG00000042333	SF3B1	100	94.692	Macaca_nemestrina
ENSPFOG00000000073	sf3b1	94	88.567	ENSMLEG00000026141	SF3B1	98	89.113	Mandrillus_leucophaeus
ENSPFOG00000000073	sf3b1	100	98.404	ENSMAMG00000010241	sf3b1	100	98.404	Mastacembelus_armatus
ENSPFOG00000000073	sf3b1	100	97.416	ENSMZEG00005021254	sf3b1	100	97.416	Maylandia_zebra
ENSPFOG00000000073	sf3b1	99	93.037	ENSMGAG00000007017	SF3B1	99	93.037	Meleagris_gallopavo
ENSPFOG00000000073	sf3b1	99	89.076	ENSMAUG00000009071	Sf3b1	99	89.076	Mesocricetus_auratus
ENSPFOG00000000073	sf3b1	100	93.323	ENSMICG00000013879	SF3B1	100	93.323	Microcebus_murinus
ENSPFOG00000000073	sf3b1	99	89.008	ENSMOCG00000000455	Sf3b1	99	89.008	Microtus_ochrogaster
ENSPFOG00000000073	sf3b1	84	97.729	ENSMMOG00000000475	sf3b1	100	97.729	Mola_mola
ENSPFOG00000000073	sf3b1	100	92.868	ENSMODG00000012275	SF3B1	100	92.868	Monodelphis_domestica
ENSPFOG00000000073	sf3b1	100	98.176	ENSMALG00000017211	sf3b1	100	98.176	Monopterus_albus
ENSPFOG00000000073	sf3b1	100	93.323	MGP_CAROLIEiJ_G0014141	Sf3b1	100	93.323	Mus_caroli
ENSPFOG00000000073	sf3b1	100	93.323	ENSMUSG00000025982	Sf3b1	100	93.323	Mus_musculus
ENSPFOG00000000073	sf3b1	100	93.323	MGP_SPRETEiJ_G0014947	Sf3b1	100	93.323	Mus_spretus
ENSPFOG00000000073	sf3b1	100	93.323	ENSMPUG00000007799	SF3B1	100	93.323	Mustela_putorius_furo
ENSPFOG00000000073	sf3b1	100	92.185	ENSMLUG00000000840	SF3B1	100	92.185	Myotis_lucifugus
ENSPFOG00000000073	sf3b1	99	92.998	ENSNGAG00000021884	-	100	92.998	Nannospalax_galili
ENSPFOG00000000073	sf3b1	100	92.494	ENSNBRG00000015816	sf3b1	100	92.559	Neolamprologus_brichardi
ENSPFOG00000000073	sf3b1	100	93.323	ENSNLEG00000006861	SF3B1	100	93.323	Nomascus_leucogenys
ENSPFOG00000000073	sf3b1	69	99.717	ENSMEUG00000015848	-	66	99.717	Notamacropus_eugenii
ENSPFOG00000000073	sf3b1	100	80.906	ENSOPRG00000008596	SF3B1	100	81.055	Ochotona_princeps
ENSPFOG00000000073	sf3b1	100	93.323	ENSODEG00000011153	-	100	93.323	Octodon_degus
ENSPFOG00000000073	sf3b1	100	97.416	ENSONIG00000013758	sf3b1	100	97.416	Oreochromis_niloticus
ENSPFOG00000000073	sf3b1	83	95.325	ENSOCUG00000012722	-	96	95.325	Oryctolagus_cuniculus
ENSPFOG00000000073	sf3b1	100	98.100	ENSORLG00000020219	sf3b1	100	98.100	Oryzias_latipes
ENSPFOG00000000073	sf3b1	100	98.100	ENSORLG00020001746	sf3b1	100	98.100	Oryzias_latipes_hni
ENSPFOG00000000073	sf3b1	64	96.686	ENSORLG00015001759	sf3b1	98	96.686	Oryzias_latipes_hsok
ENSPFOG00000000073	sf3b1	100	98.328	ENSOMEG00000019231	sf3b1	100	98.328	Oryzias_melastigma
ENSPFOG00000000073	sf3b1	100	93.323	ENSOARG00000015374	SF3B1	100	93.323	Ovis_aries
ENSPFOG00000000073	sf3b1	100	93.323	ENSPPAG00000035007	SF3B1	100	93.323	Pan_paniscus
ENSPFOG00000000073	sf3b1	100	93.323	ENSPPRG00000009090	SF3B1	100	93.323	Panthera_pardus
ENSPFOG00000000073	sf3b1	100	93.323	ENSPTIG00000021557	SF3B1	100	93.323	Panthera_tigris_altaica
ENSPFOG00000000073	sf3b1	99	86.052	ENSPTRG00000012771	SF3B1	99	86.052	Pan_troglodytes
ENSPFOG00000000073	sf3b1	100	93.323	ENSPANG00000013417	SF3B1	100	93.323	Papio_anubis
ENSPFOG00000000073	sf3b1	100	95.830	ENSPKIG00000000784	sf3b1	100	95.830	Paramormyrops_kingsleyae
ENSPFOG00000000073	sf3b1	99	92.420	ENSPSIG00000017222	SF3B1	98	92.420	Pelodiscus_sinensis
ENSPFOG00000000073	sf3b1	91	97.483	ENSPMGG00000004330	sf3b1	99	97.483	Periophthalmus_magnuspinnatus
ENSPFOG00000000073	sf3b1	99	93.277	ENSPEMG00000010699	Sf3b1	100	93.277	Peromyscus_maniculatus_bairdii
ENSPFOG00000000073	sf3b1	100	88.746	ENSPMAG00000001311	sf3b1	100	89.048	Petromyzon_marinus
ENSPFOG00000000073	sf3b1	100	92.868	ENSPCIG00000010642	SF3B1	100	92.868	Phascolarctos_cinereus
ENSPFOG00000000073	sf3b1	100	99.848	ENSPLAG00000002293	sf3b1	100	99.848	Poecilia_latipinna
ENSPFOG00000000073	sf3b1	100	99.924	ENSPMEG00000000446	sf3b1	98	99.924	Poecilia_mexicana
ENSPFOG00000000073	sf3b1	100	99.772	ENSPREG00000019652	sf3b1	100	99.772	Poecilia_reticulata
ENSPFOG00000000073	sf3b1	82	96.676	ENSPPYG00000013044	SF3B1	95	96.676	Pongo_abelii
ENSPFOG00000000073	sf3b1	100	93.171	ENSPCAG00000009292	SF3B1	100	93.171	Procavia_capensis
ENSPFOG00000000073	sf3b1	100	93.323	ENSPCOG00000024074	SF3B1	100	93.323	Propithecus_coquereli
ENSPFOG00000000073	sf3b1	100	93.323	ENSPVAG00000008302	SF3B1	100	93.323	Pteropus_vampyrus
ENSPFOG00000000073	sf3b1	100	97.340	ENSPNYG00000014939	sf3b1	100	97.340	Pundamilia_nyererei
ENSPFOG00000000073	sf3b1	100	96.889	ENSPNAG00000008288	sf3b1	100	96.889	Pygocentrus_nattereri
ENSPFOG00000000073	sf3b1	100	93.323	ENSRNOG00000013516	Sf3b1	100	93.323	Rattus_norvegicus
ENSPFOG00000000073	sf3b1	99	89.590	ENSRBIG00000026096	SF3B1	100	89.590	Rhinopithecus_bieti
ENSPFOG00000000073	sf3b1	100	93.323	ENSRROG00000031308	SF3B1	100	93.323	Rhinopithecus_roxellana
ENSPFOG00000000073	sf3b1	100	93.323	ENSSBOG00000020080	SF3B1	100	93.323	Saimiri_boliviensis_boliviensis
ENSPFOG00000000073	sf3b1	100	92.868	ENSSHAG00000017564	SF3B1	100	92.868	Sarcophilus_harrisii
ENSPFOG00000000073	sf3b1	100	96.279	ENSSFOG00015021535	sf3b1	100	96.279	Scleropages_formosus
ENSPFOG00000000073	sf3b1	99	97.422	ENSSMAG00000013977	sf3b1	99	97.422	Scophthalmus_maximus
ENSPFOG00000000073	sf3b1	100	98.556	ENSSDUG00000017422	sf3b1	100	98.556	Seriola_dumerili
ENSPFOG00000000073	sf3b1	100	98.632	ENSSLDG00000019495	sf3b1	100	98.632	Seriola_lalandi_dorsalis
ENSPFOG00000000073	sf3b1	75	98.415	ENSSARG00000007016	SF3B1	75	98.415	Sorex_araneus
ENSPFOG00000000073	sf3b1	100	93.313	ENSSPUG00000000410	SF3B1	100	93.313	Sphenodon_punctatus
ENSPFOG00000000073	sf3b1	100	98.404	ENSSPAG00000010451	sf3b1	99	98.404	Stegastes_partitus
ENSPFOG00000000073	sf3b1	91	93.017	ENSSSCG00000016075	SF3B1	100	94.692	Sus_scrofa
ENSPFOG00000000073	sf3b1	100	93.693	ENSTGUG00000010553	SF3B1	100	93.693	Taeniopygia_guttata
ENSPFOG00000000073	sf3b1	100	97.720	ENSTRUG00000015534	sf3b1	100	97.720	Takifugu_rubripes
ENSPFOG00000000073	sf3b1	84	97.004	ENSTBEG00000008714	SF3B1	93	97.004	Tupaia_belangeri
ENSPFOG00000000073	sf3b1	92	93.047	ENSTTRG00000003414	SF3B1	92	93.047	Tursiops_truncatus
ENSPFOG00000000073	sf3b1	94	83.468	ENSUAMG00000018506	SF3B1	99	97.368	Ursus_americanus
ENSPFOG00000000073	sf3b1	100	93.323	ENSUMAG00000020945	SF3B1	100	93.323	Ursus_maritimus
ENSPFOG00000000073	sf3b1	95	93.171	ENSVPAG00000005798	SF3B1	96	93.171	Vicugna_pacos
ENSPFOG00000000073	sf3b1	100	93.323	ENSVVUG00000025948	SF3B1	95	93.323	Vulpes_vulpes
ENSPFOG00000000073	sf3b1	100	91.882	ENSXETG00000013339	sf3b1	100	91.882	Xenopus_tropicalis
ENSPFOG00000000073	sf3b1	100	94.985	ENSXCOG00000018086	sf3b1	100	95.289	Xiphophorus_couchianus
ENSPFOG00000000073	sf3b1	100	99.620	ENSXMAG00000007369	sf3b1	100	99.620	Xiphophorus_maculatus