EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000000238 (Gene tree)
Gene ID: 103148577
Gene Symbol: fubp1
Alias: -
Full Name: far upstream element (FUSE) binding protein 1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 10069 bases
Position: chrKI519818.1:254063-264131
Accession: ZDB-GENE-040426-2159
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000000319	KH_1	PF00013.29	4.6e-68	1	4
ENSPFOP00000000319	KH_1	PF00013.29	4.6e-68	2	4
ENSPFOP00000000319	KH_1	PF00013.29	4.6e-68	3	4
ENSPFOP00000000319	KH_1	PF00013.29	4.6e-68	4	4
ENSPFOP00000024591	KH_1	PF00013.29	5.4e-68	1	4
ENSPFOP00000024591	KH_1	PF00013.29	5.4e-68	2	4
ENSPFOP00000024591	KH_1	PF00013.29	5.4e-68	3	4
ENSPFOP00000024591	KH_1	PF00013.29	5.4e-68	4	4
ENSPFOP00000000319	KH_2	PF07650.17	1.6e-20	1	1
ENSPFOP00000024591	KH_2	PF07650.17	1.9e-20	1	1
ENSPFOP00000000319	DUF1897	PF09005.10	2.6e-16	1	2
ENSPFOP00000000319	DUF1897	PF09005.10	2.6e-16	2	2
ENSPFOP00000024591	DUF1897	PF09005.10	3e-16	1	2
ENSPFOP00000024591	DUF1897	PF09005.10	3e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000030169	-	2156	-	ENSPFOP00000024591	678 (aa)	-	A0A096LZK0
ENSPFOT00000000320	-	2084	-	ENSPFOP00000000319	654 (aa)	-	A0A087X3G6

Gene Model

Click here to download ENSPFOG00000000238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000000238's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000000238	fubp1	57	41.250	ENSPFOG00000010086	pcbp2	77	41.250
ENSPFOG00000000238	fubp1	56	37.500	ENSPFOG00000002348	zgc:110045	67	37.500
ENSPFOG00000000238	fubp1	98	49.485	ENSPFOG00000008400	-	98	45.185
ENSPFOG00000000238	fubp1	52	37.879	ENSPFOG00000018009	nova1	53	37.879
ENSPFOG00000000238	fubp1	54	31.515	ENSPFOG00000005971	igf2bp3	55	30.726
ENSPFOG00000000238	fubp1	52	35.354	ENSPFOG00000015446	-	68	37.333
ENSPFOG00000000238	fubp1	52	37.037	ENSPFOG00000015051	pcbp3	64	37.037
ENSPFOG00000000238	fubp1	97	53.001	ENSPFOG00000004577	khsrp	97	53.055
ENSPFOG00000000238	fubp1	98	47.167	ENSPFOG00000019842	FUBP3	94	49.057
ENSPFOG00000000238	fubp1	54	41.667	ENSPFOG00000008011	PCBP2	69	41.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000000238	fubp1	60	67.672	ENSG00000162613	FUBP1	100	69.469	Homo_sapiens
ENSPFOG00000000238	fubp1	91	96.339	ENSAPOG00000014845	fubp1	89	96.339	Acanthochromis_polyacanthus
ENSPFOG00000000238	fubp1	100	83.333	ENSACIG00000020024	fubp1	100	87.082	Amphilophus_citrinellus
ENSPFOG00000000238	fubp1	100	82.934	ENSAPEG00000012232	fubp1	100	85.952	Amphiprion_percula
ENSPFOG00000000238	fubp1	100	95.872	ENSATEG00000018619	fubp1	100	95.872	Anabas_testudineus
ENSPFOG00000000238	fubp1	67	76.321	ENSACAG00000006310	FUBP1	96	69.841	Anolis_carolinensis
ENSPFOG00000000238	fubp1	100	94.954	ENSACLG00000006708	fubp1	100	94.648	Astatotilapia_calliptera
ENSPFOG00000000238	fubp1	87	84.865	ENSAMXG00000005525	fubp1	99	81.802	Astyanax_mexicanus
ENSPFOG00000000238	fubp1	65	50.303	ENSTSYG00000000148	FUBP1	100	69.749	Carlito_syrichta
ENSPFOG00000000238	fubp1	53	84.677	ENSCAPG00000011052	-	65	84.677	Cavia_aperea
ENSPFOG00000000238	fubp1	91	64.000	ENSCCAG00000036537	FUBP1	100	64.571	Cebus_capucinus
ENSPFOG00000000238	fubp1	91	72.269	ENSCGRG00001007103	Fubp1	100	69.970	Cricetulus_griseus_chok1gshd
ENSPFOG00000000238	fubp1	100	90.214	ENSCSEG00000021412	fubp1	100	87.879	Cynoglossus_semilaevis
ENSPFOG00000000238	fubp1	99	98.313	ENSCVAG00000014487	fubp1	99	98.313	Cyprinodon_variegatus
ENSPFOG00000000238	fubp1	100	81.129	ENSDARG00000029248	fubp1	100	82.764	Danio_rerio
ENSPFOG00000000238	fubp1	77	57.353	ENSDNOG00000034565	-	83	49.438	Dasypus_novemcinctus
ENSPFOG00000000238	fubp1	73	78.655	ENSETEG00000000948	-	53	78.947	Echinops_telfairi
ENSPFOG00000000238	fubp1	68	67.188	ENSEBUG00000016143	fubp1	68	61.429	Eptatretus_burgeri
ENSPFOG00000000238	fubp1	73	82.432	ENSEEUG00000001287	FUBP1	87	73.529	Erinaceus_europaeus
ENSPFOG00000000238	fubp1	100	84.662	ENSELUG00000007990	fubp1	100	85.263	Esox_lucius
ENSPFOG00000000238	fubp1	100	99.083	ENSFHEG00000005230	fubp1	100	99.083	Fundulus_heteroclitus
ENSPFOG00000000238	fubp1	100	79.610	ENSGMOG00000003370	fubp1	100	82.774	Gadus_morhua
ENSPFOG00000000238	fubp1	63	81.010	ENSGALG00000008939	FUBP1	100	70.982	Gallus_gallus
ENSPFOG00000000238	fubp1	100	97.594	ENSGAFG00000020972	fubp1	100	97.594	Gambusia_affinis
ENSPFOG00000000238	fubp1	100	85.380	ENSGACG00000016563	fubp1	100	88.636	Gasterosteus_aculeatus
ENSPFOG00000000238	fubp1	100	96.024	ENSHBUG00000009835	fubp1	100	96.024	Haplochromis_burtoni
ENSPFOG00000000238	fubp1	100	90.299	ENSHCOG00000000910	fubp1	100	91.493	Hippocampus_comes
ENSPFOG00000000238	fubp1	100	83.485	ENSIPUG00000009896	fubp1	100	84.545	Ictalurus_punctatus
ENSPFOG00000000238	fubp1	100	96.651	ENSKMAG00000018897	fubp1	100	96.651	Kryptolebias_marmoratus
ENSPFOG00000000238	fubp1	99	92.537	ENSLBEG00000012700	fubp1	97	92.687	Labrus_bergylta
ENSPFOG00000000238	fubp1	97	80.422	ENSLOCG00000003745	fubp1	99	79.476	Lepisosteus_oculatus
ENSPFOG00000000238	fubp1	62	52.353	ENSLAFG00000003273	FUBP1	99	70.890	Loxodonta_africana
ENSPFOG00000000238	fubp1	67	75.957	ENSMNEG00000045212	FUBP1	100	69.469	Macaca_nemestrina
ENSPFOG00000000238	fubp1	99	93.665	ENSMAMG00000007489	fubp1	99	93.062	Mastacembelus_armatus
ENSPFOG00000000238	fubp1	100	95.413	ENSMZEG00005024298	fubp1	100	94.801	Maylandia_zebra
ENSPFOG00000000238	fubp1	75	53.659	ENSMAUG00000016428	Fubp1	98	70.946	Mesocricetus_auratus
ENSPFOG00000000238	fubp1	85	87.847	ENSMMOG00000019463	fubp1	99	89.825	Mola_mola
ENSPFOG00000000238	fubp1	100	95.719	ENSMALG00000015173	fubp1	100	95.107	Monopterus_albus
ENSPFOG00000000238	fubp1	67	79.510	MGP_CAROLIEiJ_G0025740	Fubp1	99	76.145	Mus_caroli
ENSPFOG00000000238	fubp1	67	79.287	ENSMUSG00000028034	Fubp1	99	75.954	Mus_musculus
ENSPFOG00000000238	fubp1	67	79.333	MGP_PahariEiJ_G0027191	Fubp1	99	76.000	Mus_pahari
ENSPFOG00000000238	fubp1	67	79.510	MGP_SPRETEiJ_G0026693	Fubp1	99	76.145	Mus_spretus
ENSPFOG00000000238	fubp1	91	72.824	ENSNGAG00000014302	Fubp1	98	70.270	Nannospalax_galili
ENSPFOG00000000238	fubp1	100	83.459	ENSNBRG00000015099	fubp1	100	85.496	Neolamprologus_brichardi
ENSPFOG00000000238	fubp1	89	70.487	ENSOPRG00000001175	FUBP1	98	59.704	Ochotona_princeps
ENSPFOG00000000238	fubp1	99	51.667	ENSODEG00000003657	-	99	50.304	Octodon_degus
ENSPFOG00000000238	fubp1	99	95.552	ENSONIG00000018381	fubp1	97	94.939	Oreochromis_niloticus
ENSPFOG00000000238	fubp1	58	80.928	ENSOANG00000009777	FUBP1	99	71.082	Ornithorhynchus_anatinus
ENSPFOG00000000238	fubp1	99	84.049	ENSORLG00000003540	fubp1	99	85.429	Oryzias_latipes
ENSPFOG00000000238	fubp1	100	94.073	ENSORLG00020005908	fubp1	96	94.073	Oryzias_latipes_hni
ENSPFOG00000000238	fubp1	100	94.234	ENSORLG00015008779	fubp1	99	93.607	Oryzias_latipes_hsok
ENSPFOG00000000238	fubp1	100	93.912	ENSOMEG00000021943	fubp1	97	94.216	Oryzias_melastigma
ENSPFOG00000000238	fubp1	67	78.808	ENSOARG00000013259	FUBP1	100	73.254	Ovis_aries
ENSPFOG00000000238	fubp1	99	80.210	ENSPMGG00000009060	fubp1	99	81.184	Periophthalmus_magnuspinnatus
ENSPFOG00000000238	fubp1	55	59.825	ENSPMAG00000001644	-	93	59.825	Petromyzon_marinus
ENSPFOG00000000238	fubp1	100	97.859	ENSPLAG00000021170	fubp1	100	97.859	Poecilia_latipinna
ENSPFOG00000000238	fubp1	91	100.000	ENSPMEG00000004747	fubp1	99	100.000	Poecilia_mexicana
ENSPFOG00000000238	fubp1	100	99.847	ENSPREG00000017911	fubp1	100	99.847	Poecilia_reticulata
ENSPFOG00000000238	fubp1	69	78.017	ENSPPYG00000001219	-	68	79.157	Pongo_abelii
ENSPFOG00000000238	fubp1	100	95.413	ENSPNYG00000004552	fubp1	100	94.801	Pundamilia_nyererei
ENSPFOG00000000238	fubp1	100	86.103	ENSPNAG00000016207	fubp1	100	85.952	Pygocentrus_nattereri
ENSPFOG00000000238	fubp1	64	53.939	ENSSBOG00000027299	FUBP1	100	69.617	Saimiri_boliviensis_boliviensis
ENSPFOG00000000238	fubp1	78	53.659	ENSSHAG00000005367	FUBP1	99	71.231	Sarcophilus_harrisii
ENSPFOG00000000238	fubp1	99	83.129	ENSSFOG00015010213	fubp1	99	82.975	Scleropages_formosus
ENSPFOG00000000238	fubp1	100	89.732	ENSSMAG00000012029	fubp1	98	89.435	Scophthalmus_maximus
ENSPFOG00000000238	fubp1	100	95.038	ENSSDUG00000007383	fubp1	98	95.038	Seriola_dumerili
ENSPFOG00000000238	fubp1	100	95.038	ENSSLDG00000022863	fubp1	98	95.038	Seriola_lalandi_dorsalis
ENSPFOG00000000238	fubp1	76	72.085	ENSSARG00000011730	FUBP1	56	88.372	Sorex_araneus
ENSPFOG00000000238	fubp1	99	68.398	ENSSPUG00000008389	FUBP1	100	68.966	Sphenodon_punctatus
ENSPFOG00000000238	fubp1	100	96.636	ENSSPAG00000010161	fubp1	100	96.636	Stegastes_partitus
ENSPFOG00000000238	fubp1	100	87.316	ENSTRUG00000004615	fubp1	100	87.758	Takifugu_rubripes
ENSPFOG00000000238	fubp1	78	82.738	ENSTBEG00000017333	FUBP1	62	88.690	Tupaia_belangeri
ENSPFOG00000000238	fubp1	100	86.738	ENSXCOG00000019354	fubp1	100	86.890	Xiphophorus_couchianus
ENSPFOG00000000238	fubp1	91	99.666	ENSXMAG00000007168	fubp1	99	99.666	Xiphophorus_maculatus