EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPFOG00000000512 (Gene tree)
Gene ID
103154065
Gene Symbol
lsm11
Alias
-
Full Name
LSM11%2C U7 small nuclear RNA associated
Gene Type
protein_coding
Species
Poecilia_formosa
Status
putative
Strand
Minus strand
Length
35283 bases
Position
chrKI519982.1:471612-506894
Accession
ZDB-GENE-050309-124
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPFOP00000000570LSMPF01423.221.1e-0611
ENSPFOP00000023250LSMPF01423.221.1e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPFOT00000028494-1540-ENSPFOP00000021868228 (aa)-A0A096LRS7
ENSPFOT00000000462-1020-ENSPFOP00000000461340 (aa)-A0A087X3V8
ENSPFOT00000000571-984-ENSPFOP00000000570309 (aa)-A0A087X467
ENSPFOT00000025541-930-ENSPFOP00000023250309 (aa)-A0A087X467
Gene Model
Click here to download ENSPFOG00000000512's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000000512's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPFOG00000000512lsm118630.389ENSCSAVG00000011571-9830.389Ciona_savignyi
ENSPFOG00000000512lsm115040.000ENSCGRG00000000197Lsm119540.000Cricetulus_griseus_crigri
ENSPFOG00000000512lsm119863.863ENSCSEG00000019951lsm1110063.863Cynoglossus_semilaevis
ENSPFOG00000000512lsm119869.935ENSCVAG00000011703lsm1110071.148Cyprinodon_variegatus
ENSPFOG00000000512lsm119861.350ENSMMOG00000009365lsm1110063.158Mola_mola
ENSPFOG00000000512lsm115246.286ENSMLUG00000015930LSM119846.286Myotis_lucifugus
ENSPFOG00000000512lsm119862.620ENSPMGG00000020709lsm1110062.620Periophthalmus_magnuspinnatus
ENSPFOG00000000512lsm119899.671ENSPLAG00000019434lsm1110099.671Poecilia_latipinna
ENSPFOG00000000512lsm1110096.117ENSPREG00000019696lsm119196.117Poecilia_reticulata
ENSPFOG00000000512lsm119891.776ENSXMAG00000008238lsm1110091.776Xiphophorus_maculatus

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