EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000000797 (Gene tree)
Gene ID: 103155839
Gene Symbol: lig4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 4988 bases
Position: chrKI520061.1:98326-103313
Accession: 103155839
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000000760	RNA_ligase	PF09414.10	7.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000000762	-	3906	XM_007577692	ENSPFOP00000000760	908 (aa)	XP_007577754	A0A087X4Q7

Gene Model

Click here to download ENSPFOG00000000797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000000797's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000000797	lig4	99	65.604	ENSG00000174405	LIG4	100	66.351	Homo_sapiens
ENSPFOG00000000797	lig4	100	89.145	ENSAPOG00000000866	lig4	100	88.706	Acanthochromis_polyacanthus
ENSPFOG00000000797	lig4	99	64.333	ENSAMEG00000019685	LIG4	98	64.850	Ailuropoda_melanoleuca
ENSPFOG00000000797	lig4	99	89.462	ENSACIG00000018309	lig4	98	90.157	Amphilophus_citrinellus
ENSPFOG00000000797	lig4	100	88.816	ENSAOCG00000011768	lig4	100	88.377	Amphiprion_ocellaris
ENSPFOG00000000797	lig4	100	89.035	ENSAPEG00000017815	lig4	100	88.596	Amphiprion_percula
ENSPFOG00000000797	lig4	100	88.596	ENSATEG00000005583	lig4	100	88.268	Anabas_testudineus
ENSPFOG00000000797	lig4	96	67.503	ENSAPLG00000001673	LIG4	99	67.389	Anas_platyrhynchos
ENSPFOG00000000797	lig4	99	67.774	ENSACAG00000014566	LIG4	99	68.121	Anolis_carolinensis
ENSPFOG00000000797	lig4	99	65.385	ENSANAG00000012446	LIG4	99	65.628	Aotus_nancymaae
ENSPFOG00000000797	lig4	99	87.925	ENSACLG00000027051	lig4	100	87.500	Astatotilapia_calliptera
ENSPFOG00000000797	lig4	100	81.025	ENSAMXG00000008192	lig4	95	81.025	Astyanax_mexicanus
ENSPFOG00000000797	lig4	99	64.835	ENSBTAG00000015868	LIG4	99	64.961	Bos_taurus
ENSPFOG00000000797	lig4	99	64.835	ENSCJAG00000014689	LIG4	99	65.295	Callithrix_jacchus
ENSPFOG00000000797	lig4	99	64.725	ENSCAFG00000006031	LIG4	99	65.184	Canis_familiaris
ENSPFOG00000000797	lig4	99	64.725	ENSCAFG00020021230	LIG4	99	65.184	Canis_lupus_dingo
ENSPFOG00000000797	lig4	99	64.725	ENSCHIG00000001019	LIG4	99	64.850	Capra_hircus
ENSPFOG00000000797	lig4	98	64.341	ENSCAPG00000006284	LIG4	99	64.294	Cavia_aperea
ENSPFOG00000000797	lig4	99	63.846	ENSCPOG00000014266	LIG4	99	64.182	Cavia_porcellus
ENSPFOG00000000797	lig4	99	65.385	ENSCCAG00000019971	LIG4	99	65.517	Cebus_capucinus
ENSPFOG00000000797	lig4	99	65.824	ENSCATG00000021075	LIG4	99	65.740	Cercocebus_atys
ENSPFOG00000000797	lig4	99	65.055	ENSCLAG00000003376	LIG4	99	65.406	Chinchilla_lanigera
ENSPFOG00000000797	lig4	99	65.495	ENSCSAG00000000211	LIG4	99	65.740	Chlorocebus_sabaeus
ENSPFOG00000000797	lig4	98	69.145	ENSCPBG00000023291	LIG4	98	69.308	Chrysemys_picta_bellii
ENSPFOG00000000797	lig4	70	46.832	ENSCING00000009536	-	96	47.310	Ciona_intestinalis
ENSPFOG00000000797	lig4	83	45.000	ENSCSAVG00000010336	-	98	44.914	Ciona_savignyi
ENSPFOG00000000797	lig4	99	64.945	ENSCANG00000005805	LIG4	99	65.406	Colobus_angolensis_palliatus
ENSPFOG00000000797	lig4	99	64.215	ENSCGRG00001012072	Lig4	99	64.556	Cricetulus_griseus_chok1gshd
ENSPFOG00000000797	lig4	99	64.215	ENSCGRG00000013417	Lig4	99	64.556	Cricetulus_griseus_crigri
ENSPFOG00000000797	lig4	97	85.264	ENSCSEG00000013905	lig4	96	85.264	Cynoglossus_semilaevis
ENSPFOG00000000797	lig4	100	91.676	ENSCVAG00000007896	lig4	100	91.019	Cyprinodon_variegatus
ENSPFOG00000000797	lig4	100	80.044	ENSDARG00000060620	lig4	100	79.496	Danio_rerio
ENSPFOG00000000797	lig4	99	64.764	ENSDNOG00000000513	LIG4	99	64.889	Dasypus_novemcinctus
ENSPFOG00000000797	lig4	99	65.495	ENSDORG00000027303	Lig4	99	65.517	Dipodomys_ordii
ENSPFOG00000000797	lig4	89	30.978	FBgn0030506	Lig4	86	31.475	Drosophila_melanogaster
ENSPFOG00000000797	lig4	98	63.415	ENSETEG00000015563	LIG4	99	63.444	Echinops_telfairi
ENSPFOG00000000797	lig4	99	45.016	ENSEBUG00000014243	lig4	98	44.551	Eptatretus_burgeri
ENSPFOG00000000797	lig4	99	64.835	ENSEASG00005022073	LIG4	99	65.072	Equus_asinus_asinus
ENSPFOG00000000797	lig4	99	64.615	ENSECAG00000003257	LIG4	99	64.850	Equus_caballus
ENSPFOG00000000797	lig4	98	83.111	ENSELUG00000006787	lig4	98	83.166	Esox_lucius
ENSPFOG00000000797	lig4	98	64.784	ENSFCAG00000031985	LIG4	99	64.850	Felis_catus
ENSPFOG00000000797	lig4	88	69.554	ENSFALG00000004214	LIG4	96	70.328	Ficedula_albicollis
ENSPFOG00000000797	lig4	99	63.736	ENSFDAG00000008973	LIG4	99	63.737	Fukomys_damarensis
ENSPFOG00000000797	lig4	100	92.434	ENSFHEG00000007398	lig4	91	91.886	Fundulus_heteroclitus
ENSPFOG00000000797	lig4	86	78.306	ENSGMOG00000012843	lig4	98	78.312	Gadus_morhua
ENSPFOG00000000797	lig4	99	65.899	ENSGALG00000016854	LIG4	98	66.518	Gallus_gallus
ENSPFOG00000000797	lig4	99	98.020	ENSGAFG00000019779	lig4	96	98.020	Gambusia_affinis
ENSPFOG00000000797	lig4	99	84.327	ENSGACG00000014135	lig4	98	84.787	Gasterosteus_aculeatus
ENSPFOG00000000797	lig4	99	65.385	ENSGGOG00000027771	LIG4	99	65.628	Gorilla_gorilla
ENSPFOG00000000797	lig4	99	87.706	ENSHBUG00000006245	lig4	100	87.281	Haplochromis_burtoni
ENSPFOG00000000797	lig4	99	64.286	ENSHGLG00000000718	LIG4	99	64.627	Heterocephalus_glaber_female
ENSPFOG00000000797	lig4	99	64.286	ENSHGLG00100003265	LIG4	99	64.627	Heterocephalus_glaber_male
ENSPFOG00000000797	lig4	100	82.366	ENSHCOG00000012010	lig4	100	82.366	Hippocampus_comes
ENSPFOG00000000797	lig4	100	78.509	ENSIPUG00000013748	lig4	98	79.083	Ictalurus_punctatus
ENSPFOG00000000797	lig4	98	65.891	ENSSTOG00000024303	LIG4	99	65.740	Ictidomys_tridecemlineatus
ENSPFOG00000000797	lig4	99	64.396	ENSJJAG00000006750	Lig4	99	64.739	Jaculus_jaculus
ENSPFOG00000000797	lig4	100	87.171	ENSKMAG00000001149	lig4	100	87.171	Kryptolebias_marmoratus
ENSPFOG00000000797	lig4	91	86.699	ENSLBEG00000014578	lig4	100	86.699	Labrus_bergylta
ENSPFOG00000000797	lig4	98	68.966	ENSLACG00000003282	LIG4	98	69.050	Latimeria_chalumnae
ENSPFOG00000000797	lig4	99	73.039	ENSLOCG00000008901	lig4	97	73.326	Lepisosteus_oculatus
ENSPFOG00000000797	lig4	99	64.364	ENSLAFG00000031152	LIG4	99	64.373	Loxodonta_africana
ENSPFOG00000000797	lig4	99	65.604	ENSMFAG00000037235	LIG4	99	65.851	Macaca_fascicularis
ENSPFOG00000000797	lig4	99	65.385	ENSMMUG00000008874	LIG4	99	65.628	Macaca_mulatta
ENSPFOG00000000797	lig4	99	65.604	ENSMNEG00000023575	LIG4	99	65.851	Macaca_nemestrina
ENSPFOG00000000797	lig4	99	65.385	ENSMLEG00000026720	LIG4	99	65.628	Mandrillus_leucophaeus
ENSPFOG00000000797	lig4	100	88.816	ENSMAMG00000008472	lig4	99	88.377	Mastacembelus_armatus
ENSPFOG00000000797	lig4	99	87.925	ENSMZEG00005001855	lig4	100	87.500	Maylandia_zebra
ENSPFOG00000000797	lig4	98	66.556	ENSMGAG00000015532	LIG4	98	66.629	Meleagris_gallopavo
ENSPFOG00000000797	lig4	99	63.407	ENSMOCG00000019000	Lig4	99	63.849	Microtus_ochrogaster
ENSPFOG00000000797	lig4	100	86.184	ENSMMOG00000004390	lig4	100	86.184	Mola_mola
ENSPFOG00000000797	lig4	99	65.752	ENSMODG00000025064	LIG4	99	66.000	Monodelphis_domestica
ENSPFOG00000000797	lig4	100	88.216	ENSMALG00000008555	lig4	100	87.775	Monopterus_albus
ENSPFOG00000000797	lig4	99	64.176	MGP_CAROLIEiJ_G0030809	Lig4	99	64.627	Mus_caroli
ENSPFOG00000000797	lig4	99	63.736	ENSMUSG00000049717	Lig4	99	64.182	Mus_musculus
ENSPFOG00000000797	lig4	99	64.286	MGP_PahariEiJ_G0021270	Lig4	99	64.739	Mus_pahari
ENSPFOG00000000797	lig4	99	64.066	MGP_SPRETEiJ_G0031917	Lig4	99	64.516	Mus_spretus
ENSPFOG00000000797	lig4	99	64.945	ENSMPUG00000018675	LIG4	99	65.072	Mustela_putorius_furo
ENSPFOG00000000797	lig4	99	65.385	ENSMLUG00000001267	LIG4	99	65.628	Myotis_lucifugus
ENSPFOG00000000797	lig4	99	64.725	ENSNGAG00000013258	Lig4	99	65.072	Nannospalax_galili
ENSPFOG00000000797	lig4	99	87.706	ENSNBRG00000021252	lig4	100	87.281	Neolamprologus_brichardi
ENSPFOG00000000797	lig4	99	65.055	ENSNLEG00000007888	LIG4	99	65.184	Nomascus_leucogenys
ENSPFOG00000000797	lig4	99	63.516	ENSOPRG00000005765	LIG4	99	63.515	Ochotona_princeps
ENSPFOG00000000797	lig4	99	63.516	ENSODEG00000019683	LIG4	99	63.960	Octodon_degus
ENSPFOG00000000797	lig4	99	87.925	ENSONIG00000011969	lig4	99	87.500	Oreochromis_niloticus
ENSPFOG00000000797	lig4	99	64.066	ENSOCUG00000015734	LIG4	99	64.405	Oryctolagus_cuniculus
ENSPFOG00000000797	lig4	100	83.716	ENSORLG00000004041	lig4	98	84.633	Oryzias_latipes
ENSPFOG00000000797	lig4	100	84.153	ENSORLG00020019607	lig4	98	85.078	Oryzias_latipes_hni
ENSPFOG00000000797	lig4	100	83.825	ENSORLG00015017754	lig4	98	84.744	Oryzias_latipes_hsok
ENSPFOG00000000797	lig4	76	89.275	ENSOMEG00000003459	lig4	100	89.275	Oryzias_melastigma
ENSPFOG00000000797	lig4	99	64.770	ENSOGAG00000032120	LIG4	98	65.517	Otolemur_garnettii
ENSPFOG00000000797	lig4	82	68.683	ENSOARG00000005590	LIG4	97	69.304	Ovis_aries
ENSPFOG00000000797	lig4	99	65.385	ENSPPAG00000032998	LIG4	99	65.628	Pan_paniscus
ENSPFOG00000000797	lig4	98	65.338	ENSPPRG00000017804	LIG4	99	65.406	Panthera_pardus
ENSPFOG00000000797	lig4	98	65.227	ENSPTIG00000010051	LIG4	99	65.295	Panthera_tigris_altaica
ENSPFOG00000000797	lig4	99	65.495	ENSPTRG00000006025	LIG4	99	65.740	Pan_troglodytes
ENSPFOG00000000797	lig4	99	65.934	ENSPANG00000007562	LIG4	99	65.851	Papio_anubis
ENSPFOG00000000797	lig4	99	78.587	ENSPKIG00000011645	lig4	97	79.083	Paramormyrops_kingsleyae
ENSPFOG00000000797	lig4	99	68.467	ENSPSIG00000001504	LIG4	98	69.128	Pelodiscus_sinensis
ENSPFOG00000000797	lig4	98	81.737	ENSPMGG00000013486	lig4	100	81.066	Periophthalmus_magnuspinnatus
ENSPFOG00000000797	lig4	98	64.270	ENSPEMG00000000076	Lig4	99	64.222	Peromyscus_maniculatus_bairdii
ENSPFOG00000000797	lig4	99	65.093	ENSPCIG00000021882	LIG4	99	65.444	Phascolarctos_cinereus
ENSPFOG00000000797	lig4	100	99.890	ENSPLAG00000001196	lig4	100	99.890	Poecilia_latipinna
ENSPFOG00000000797	lig4	100	99.670	ENSPMEG00000021353	lig4	100	99.670	Poecilia_mexicana
ENSPFOG00000000797	lig4	100	98.348	ENSPREG00000007323	lig4	100	98.348	Poecilia_reticulata
ENSPFOG00000000797	lig4	99	64.835	ENSPPYG00000005540	LIG4	99	65.072	Pongo_abelii
ENSPFOG00000000797	lig4	99	64.615	ENSPVAG00000016403	LIG4	99	64.850	Pteropus_vampyrus
ENSPFOG00000000797	lig4	99	87.925	ENSPNYG00000009660	lig4	100	87.500	Pundamilia_nyererei
ENSPFOG00000000797	lig4	98	82.517	ENSPNAG00000028069	LIG4	99	82.438	Pygocentrus_nattereri
ENSPFOG00000000797	lig4	98	82.517	ENSPNAG00000028056	lig4	99	82.438	Pygocentrus_nattereri
ENSPFOG00000000797	lig4	99	63.846	ENSRNOG00000014605	Lig4	99	64.182	Rattus_norvegicus
ENSPFOG00000000797	lig4	99	64.725	ENSRBIG00000039962	LIG4	99	64.961	Rhinopithecus_bieti
ENSPFOG00000000797	lig4	99	65.275	ENSRROG00000006040	LIG4	99	65.517	Rhinopithecus_roxellana
ENSPFOG00000000797	lig4	99	65.055	ENSSBOG00000019029	LIG4	99	65.295	Saimiri_boliviensis_boliviensis
ENSPFOG00000000797	lig4	99	63.117	ENSSHAG00000009525	LIG4	99	63.889	Sarcophilus_harrisii
ENSPFOG00000000797	lig4	99	79.185	ENSSFOG00015012835	lig4	98	79.866	Scleropages_formosus
ENSPFOG00000000797	lig4	100	83.333	ENSSMAG00000011267	lig4	100	82.785	Scophthalmus_maximus
ENSPFOG00000000797	lig4	100	88.197	ENSSDUG00000010343	lig4	100	87.978	Seriola_dumerili
ENSPFOG00000000797	lig4	100	86.667	ENSSLDG00000003239	lig4	100	86.448	Seriola_lalandi_dorsalis
ENSPFOG00000000797	lig4	99	64.796	ENSSARG00000006573	LIG4	99	64.856	Sorex_araneus
ENSPFOG00000000797	lig4	92	69.286	ENSSPUG00000002444	LIG4	100	69.048	Sphenodon_punctatus
ENSPFOG00000000797	lig4	100	89.583	ENSSPAG00000001609	lig4	100	89.145	Stegastes_partitus
ENSPFOG00000000797	lig4	99	64.796	ENSSSCG00000009540	LIG4	99	65.145	Sus_scrofa
ENSPFOG00000000797	lig4	98	67.333	ENSTGUG00000010795	LIG4	99	67.411	Taeniopygia_guttata
ENSPFOG00000000797	lig4	100	86.952	ENSTRUG00000009984	lig4	100	86.404	Takifugu_rubripes
ENSPFOG00000000797	lig4	100	84.211	ENSTNIG00000010348	lig4	100	84.101	Tetraodon_nigroviridis
ENSPFOG00000000797	lig4	99	64.945	ENSTBEG00000017741	LIG4	99	65.184	Tupaia_belangeri
ENSPFOG00000000797	lig4	99	64.066	ENSTTRG00000012660	LIG4	99	64.182	Tursiops_truncatus
ENSPFOG00000000797	lig4	99	64.505	ENSUAMG00000003773	LIG4	99	64.850	Ursus_americanus
ENSPFOG00000000797	lig4	98	68.263	ENSXETG00000002654	lig4	98	68.263	Xenopus_tropicalis
ENSPFOG00000000797	lig4	100	97.907	ENSXCOG00000017401	lig4	100	97.907	Xiphophorus_couchianus
ENSPFOG00000000797	lig4	100	98.128	ENSXMAG00000015142	lig4	99	98.128	Xiphophorus_maculatus