EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000001306 (Gene tree)
Gene ID: 103130392
Gene Symbol: srsf4
Alias: -
Full Name: serine/arginine-rich splicing factor 4-like
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 4270 bases
Position: chrKI520241.1:75519-79788
Accession: 103130392
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000001220	RRM_1	PF00076.22	3.6e-32	1	2
ENSPFOP00000001220	RRM_1	PF00076.22	3.6e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000001223	-	1311	-	ENSPFOP00000001220	363 (aa)	XP_007541839	A0A087X617

Gene Model

Click here to download ENSPFOG00000001306's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000001306's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000001306	srsf4	53	44.000	ENSPFOG00000018325	-	70	44.221
ENSPFOG00000001306	srsf4	63	54.762	ENSPFOG00000017700	srsf5b	60	64.835

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000001306	srsf4	66	69.685	ENSG00000116350	SRSF4	76	70.588	Homo_sapiens
ENSPFOG00000001306	srsf4	53	91.099	ENSACIG00000018649	srsf4	91	95.588	Amphilophus_citrinellus
ENSPFOG00000001306	srsf4	66	68.182	ENSAPEG00000020826	srsf4	84	72.119	Amphiprion_percula
ENSPFOG00000001306	srsf4	78	68.641	ENSAMXG00000034811	srsf4	81	89.157	Astyanax_mexicanus
ENSPFOG00000001306	srsf4	67	94.203	ENSCSEG00000010058	srsf4	75	93.443	Cynoglossus_semilaevis
ENSPFOG00000001306	srsf4	62	59.184	ENSCVAG00000004342	srsf4	85	58.687	Cyprinodon_variegatus
ENSPFOG00000001306	srsf4	91	56.812	ENSELUG00000017551	srsf4	95	75.940	Esox_lucius
ENSPFOG00000001306	srsf4	99	82.645	ENSFHEG00000007472	srsf4	90	98.810	Fundulus_heteroclitus
ENSPFOG00000001306	srsf4	94	90.196	ENSGAFG00000018496	srsf4	92	95.588	Gambusia_affinis
ENSPFOG00000001306	srsf4	73	98.485	ENSHCOG00000012540	srsf4	80	98.485	Hippocampus_comes
ENSPFOG00000001306	srsf4	94	74.576	ENSKMAG00000013631	srsf4	97	74.462	Kryptolebias_marmoratus
ENSPFOG00000001306	srsf4	66	74.803	ENSMMUG00000007110	SRSF4	53	81.592	Macaca_mulatta
ENSPFOG00000001306	srsf4	76	94.203	ENSMAMG00000004888	srsf4	93	95.588	Mastacembelus_armatus
ENSPFOG00000001306	srsf4	99	69.189	ENSMMOG00000013653	srsf4	94	95.588	Mola_mola
ENSPFOG00000001306	srsf4	77	75.357	ENSMALG00000013392	srsf4	94	95.588	Monopterus_albus
ENSPFOG00000001306	srsf4	75	56.159	ENSNLEG00000030787	-	62	71.910	Nomascus_leucogenys
ENSPFOG00000001306	srsf4	94	72.254	ENSORLG00015007566	srsf4	91	95.588	Oryzias_latipes_hsok
ENSPFOG00000001306	srsf4	99	64.658	ENSOMEG00000005541	srsf4	93	71.552	Oryzias_melastigma
ENSPFOG00000001306	srsf4	100	91.781	ENSPLAG00000008812	srsf4	99	91.781	Poecilia_latipinna
ENSPFOG00000001306	srsf4	100	91.304	ENSPMEG00000023638	srsf4	99	91.304	Poecilia_mexicana
ENSPFOG00000001306	srsf4	84	98.507	ENSPREG00000009639	srsf4	92	95.652	Poecilia_reticulata
ENSPFOG00000001306	srsf4	75	75.180	ENSPNYG00000003796	srsf4	56	94.505	Pundamilia_nyererei
ENSPFOG00000001306	srsf4	92	73.731	ENSSPAG00000014538	srsf4	83	95.833	Stegastes_partitus
ENSPFOG00000001306	srsf4	52	95.213	ENSTNIG00000000115	-	83	70.462	Tetraodon_nigroviridis
ENSPFOG00000001306	srsf4	62	63.291	ENSXCOG00000003212	-	55	75.532	Xiphophorus_couchianus
ENSPFOG00000001306	srsf4	94	88.663	ENSXCOG00000018826	srsf4	95	88.550	Xiphophorus_couchianus