EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000001557 (Gene tree)
Gene ID: 103146200
Gene Symbol: snd1
Alias: -
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 170315 bases
Position: chrKI519764.1:231402-401716
Accession: 103146200
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000002200	TUDOR	PF00567.24	1.7e-26	1	1
ENSPFOP00000002200	SNase	PF00565.17	2.1e-67	1	4
ENSPFOP00000002200	SNase	PF00565.17	2.1e-67	2	4
ENSPFOP00000002200	SNase	PF00565.17	2.1e-67	3	4
ENSPFOP00000002200	SNase	PF00565.17	2.1e-67	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000002204	-	6244	-	ENSPFOP00000002200	911 (aa)	XP_007564072	A0A087X8U7

Gene Model

Click here to download ENSPFOG00000001557's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000001557's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000001557	snd1	99	84.650	ENSG00000197157	SND1	100	83.772	Homo_sapiens
ENSPFOG00000001557	snd1	100	96.158	ENSAPOG00000017599	snd1	100	96.158	Acanthochromis_polyacanthus
ENSPFOG00000001557	snd1	100	83.589	ENSAMEG00000004664	SND1	94	83.589	Ailuropoda_melanoleuca
ENSPFOG00000001557	snd1	100	91.987	ENSACIG00000003551	snd1	100	91.987	Amphilophus_citrinellus
ENSPFOG00000001557	snd1	100	95.939	ENSAOCG00000014166	snd1	100	95.939	Amphiprion_ocellaris
ENSPFOG00000001557	snd1	100	95.939	ENSAPEG00000007067	snd1	100	95.939	Amphiprion_percula
ENSPFOG00000001557	snd1	98	95.190	ENSATEG00000018475	snd1	89	95.190	Anabas_testudineus
ENSPFOG00000001557	snd1	99	84.650	ENSANAG00000034463	SND1	100	83.772	Aotus_nancymaae
ENSPFOG00000001557	snd1	100	94.731	ENSACLG00000022897	snd1	100	94.731	Astatotilapia_calliptera
ENSPFOG00000001557	snd1	99	90.220	ENSAMXG00000016318	snd1	99	90.220	Astyanax_mexicanus
ENSPFOG00000001557	snd1	99	84.761	ENSBTAG00000010692	SND1	100	83.882	Bos_taurus
ENSPFOG00000001557	snd1	99	46.452	WBGene00006626	tsn-1	99	46.559	Caenorhabditis_elegans
ENSPFOG00000001557	snd1	99	84.316	ENSCJAG00000017668	SND1	100	83.443	Callithrix_jacchus
ENSPFOG00000001557	snd1	100	83.882	ENSCAFG00000001700	SND1	100	83.882	Canis_familiaris
ENSPFOG00000001557	snd1	100	83.882	ENSCAFG00020021639	SND1	100	83.882	Canis_lupus_dingo
ENSPFOG00000001557	snd1	99	84.650	ENSCHIG00000023390	SND1	100	83.772	Capra_hircus
ENSPFOG00000001557	snd1	70	87.544	ENSTSYG00000004979	SND1	96	87.544	Carlito_syrichta
ENSPFOG00000001557	snd1	97	74.437	ENSCAPG00000010677	SND1	97	73.802	Cavia_aperea
ENSPFOG00000001557	snd1	99	84.427	ENSCPOG00000006251	SND1	100	83.553	Cavia_porcellus
ENSPFOG00000001557	snd1	99	84.538	ENSCCAG00000036847	SND1	100	83.662	Cebus_capucinus
ENSPFOG00000001557	snd1	99	84.872	ENSCATG00000035214	SND1	100	83.991	Cercocebus_atys
ENSPFOG00000001557	snd1	99	84.650	ENSCLAG00000011796	SND1	100	83.772	Chinchilla_lanigera
ENSPFOG00000001557	snd1	99	84.872	ENSCSAG00000010182	SND1	100	83.991	Chlorocebus_sabaeus
ENSPFOG00000001557	snd1	77	77.228	ENSCHOG00000002218	SND1	85	77.000	Choloepus_hoffmanni
ENSPFOG00000001557	snd1	100	84.083	ENSCPBG00000018094	SND1	100	84.083	Chrysemys_picta_bellii
ENSPFOG00000001557	snd1	98	56.368	ENSCING00000000524	-	99	55.895	Ciona_intestinalis
ENSPFOG00000001557	snd1	99	56.674	ENSCSAVG00000008807	-	99	56.455	Ciona_savignyi
ENSPFOG00000001557	snd1	99	84.872	ENSCANG00000035119	SND1	100	83.991	Colobus_angolensis_palliatus
ENSPFOG00000001557	snd1	99	83.982	ENSCGRG00001022514	Snd1	98	85.403	Cricetulus_griseus_chok1gshd
ENSPFOG00000001557	snd1	97	84.086	ENSCGRG00000012277	Snd1	99	84.086	Cricetulus_griseus_crigri
ENSPFOG00000001557	snd1	100	93.743	ENSCSEG00000008661	snd1	100	93.743	Cynoglossus_semilaevis
ENSPFOG00000001557	snd1	100	97.146	ENSCVAG00000010316	snd1	100	97.146	Cyprinodon_variegatus
ENSPFOG00000001557	snd1	100	89.047	ENSDARG00000006766	snd1	99	90.653	Danio_rerio
ENSPFOG00000001557	snd1	97	82.677	ENSDNOG00000006795	SND1	100	82.677	Dasypus_novemcinctus
ENSPFOG00000001557	snd1	99	84.427	ENSDORG00000000336	Snd1	100	83.553	Dipodomys_ordii
ENSPFOG00000001557	snd1	98	50.271	FBgn0035121	Tudor-SN	99	49.732	Drosophila_melanogaster
ENSPFOG00000001557	snd1	90	88.889	ENSETEG00000000375	SND1	92	88.889	Echinops_telfairi
ENSPFOG00000001557	snd1	60	66.846	ENSEBUG00000014201	-	84	76.630	Eptatretus_burgeri
ENSPFOG00000001557	snd1	99	83.260	ENSEASG00005008513	SND1	100	82.416	Equus_asinus_asinus
ENSPFOG00000001557	snd1	99	84.427	ENSECAG00000011451	SND1	100	83.443	Equus_caballus
ENSPFOG00000001557	snd1	99	74.861	ENSEEUG00000014737	SND1	100	74.123	Erinaceus_europaeus
ENSPFOG00000001557	snd1	99	88.255	ENSELUG00000001805	snd1	96	88.255	Esox_lucius
ENSPFOG00000001557	snd1	100	83.772	ENSFCAG00000008289	SND1	100	83.772	Felis_catus
ENSPFOG00000001557	snd1	98	84.340	ENSFDAG00000015881	SND1	100	83.333	Fukomys_damarensis
ENSPFOG00000001557	snd1	100	94.844	ENSFHEG00000004093	snd1	99	96.473	Fundulus_heteroclitus
ENSPFOG00000001557	snd1	75	83.616	ENSGMOG00000018932	snd1	66	83.616	Gadus_morhua
ENSPFOG00000001557	snd1	100	98.683	ENSGAFG00000008421	snd1	100	98.683	Gambusia_affinis
ENSPFOG00000001557	snd1	100	61.280	ENSGACG00000019793	snd1	100	61.280	Gasterosteus_aculeatus
ENSPFOG00000001557	snd1	99	84.872	ENSGGOG00000009614	SND1	100	83.991	Gorilla_gorilla
ENSPFOG00000001557	snd1	100	94.621	ENSHBUG00000019135	snd1	100	94.621	Haplochromis_burtoni
ENSPFOG00000001557	snd1	99	84.205	ENSHGLG00000003618	SND1	98	85.570	Heterocephalus_glaber_female
ENSPFOG00000001557	snd1	99	84.205	ENSHGLG00100012449	SND1	99	84.205	Heterocephalus_glaber_male
ENSPFOG00000001557	snd1	100	92.097	ENSHCOG00000005266	snd1	100	92.097	Hippocampus_comes
ENSPFOG00000001557	snd1	99	88.255	ENSIPUG00000013279	snd1	99	88.255	Ictalurus_punctatus
ENSPFOG00000001557	snd1	99	84.538	ENSSTOG00000002140	SND1	100	83.662	Ictidomys_tridecemlineatus
ENSPFOG00000001557	snd1	99	84.538	ENSJJAG00000009561	Snd1	100	83.662	Jaculus_jaculus
ENSPFOG00000001557	snd1	100	96.707	ENSKMAG00000016997	snd1	100	96.707	Kryptolebias_marmoratus
ENSPFOG00000001557	snd1	100	93.743	ENSLBEG00000013563	snd1	100	93.743	Labrus_bergylta
ENSPFOG00000001557	snd1	99	88.742	ENSLOCG00000015537	snd1	99	87.908	Lepisosteus_oculatus
ENSPFOG00000001557	snd1	100	83.882	ENSLAFG00000009696	SND1	100	83.882	Loxodonta_africana
ENSPFOG00000001557	snd1	99	84.872	ENSMFAG00000038114	SND1	100	83.991	Macaca_fascicularis
ENSPFOG00000001557	snd1	99	84.872	ENSMMUG00000015432	SND1	100	83.991	Macaca_mulatta
ENSPFOG00000001557	snd1	99	84.872	ENSMNEG00000039808	SND1	100	85.006	Macaca_nemestrina
ENSPFOG00000001557	snd1	99	84.761	ENSMLEG00000029040	SND1	100	84.893	Mandrillus_leucophaeus
ENSPFOG00000001557	snd1	100	94.292	ENSMAMG00000011739	snd1	100	94.292	Mastacembelus_armatus
ENSPFOG00000001557	snd1	100	94.731	ENSMZEG00005005681	snd1	100	94.731	Maylandia_zebra
ENSPFOG00000001557	snd1	99	84.761	ENSMICG00000000097	SND1	100	83.882	Microcebus_murinus
ENSPFOG00000001557	snd1	99	84.538	ENSMOCG00000005040	Snd1	100	83.662	Microtus_ochrogaster
ENSPFOG00000001557	snd1	100	94.182	ENSMMOG00000001795	snd1	100	94.182	Mola_mola
ENSPFOG00000001557	snd1	99	83.871	ENSMODG00000015182	SND1	100	83.004	Monodelphis_domestica
ENSPFOG00000001557	snd1	100	94.621	ENSMALG00000012071	snd1	100	94.621	Monopterus_albus
ENSPFOG00000001557	snd1	98	84.228	MGP_CAROLIEiJ_G0028159	Snd1	99	85.378	Mus_caroli
ENSPFOG00000001557	snd1	98	84.004	ENSMUSG00000001424	Snd1	100	83.004	Mus_musculus
ENSPFOG00000001557	snd1	98	84.228	MGP_PahariEiJ_G0021917	Snd1	100	85.378	Mus_pahari
ENSPFOG00000001557	snd1	98	84.228	MGP_SPRETEiJ_G0029159	Snd1	100	83.224	Mus_spretus
ENSPFOG00000001557	snd1	100	83.772	ENSMPUG00000006545	SND1	100	83.333	Mustela_putorius_furo
ENSPFOG00000001557	snd1	97	83.724	ENSMLUG00000017130	SND1	99	83.055	Myotis_lucifugus
ENSPFOG00000001557	snd1	99	84.427	ENSNGAG00000011186	Snd1	100	83.553	Nannospalax_galili
ENSPFOG00000001557	snd1	100	94.731	ENSNBRG00000006681	snd1	100	94.731	Neolamprologus_brichardi
ENSPFOG00000001557	snd1	100	83.991	ENSNLEG00000012263	SND1	99	86.050	Nomascus_leucogenys
ENSPFOG00000001557	snd1	91	88.889	ENSOPRG00000013405	SND1	92	88.889	Ochotona_princeps
ENSPFOG00000001557	snd1	99	84.650	ENSODEG00000011502	SND1	99	84.650	Octodon_degus
ENSPFOG00000001557	snd1	100	94.621	ENSONIG00000011481	snd1	97	94.621	Oreochromis_niloticus
ENSPFOG00000001557	snd1	98	83.708	ENSOANG00000000817	SND1	99	82.418	Ornithorhynchus_anatinus
ENSPFOG00000001557	snd1	99	83.077	ENSOCUG00000001620	SND1	99	83.077	Oryctolagus_cuniculus
ENSPFOG00000001557	snd1	100	93.743	ENSORLG00000015201	snd1	100	93.743	Oryzias_latipes
ENSPFOG00000001557	snd1	100	93.963	ENSORLG00020013991	snd1	100	93.963	Oryzias_latipes_hni
ENSPFOG00000001557	snd1	100	93.963	ENSORLG00015012436	snd1	100	93.963	Oryzias_latipes_hsok
ENSPFOG00000001557	snd1	100	94.292	ENSOMEG00000006406	snd1	100	94.292	Oryzias_melastigma
ENSPFOG00000001557	snd1	99	84.684	ENSOGAG00000013356	SND1	94	83.807	Otolemur_garnettii
ENSPFOG00000001557	snd1	97	82.413	ENSOARG00000002149	SND1	100	82.413	Ovis_aries
ENSPFOG00000001557	snd1	99	84.761	ENSPPAG00000042947	SND1	100	83.882	Pan_paniscus
ENSPFOG00000001557	snd1	100	83.772	ENSPPRG00000004494	SND1	100	83.772	Panthera_pardus
ENSPFOG00000001557	snd1	100	83.662	ENSPTIG00000014214	SND1	100	83.662	Panthera_tigris_altaica
ENSPFOG00000001557	snd1	99	84.761	ENSPTRG00000023911	SND1	100	83.882	Pan_troglodytes
ENSPFOG00000001557	snd1	97	84.989	ENSPANG00000011997	SND1	99	84.989	Papio_anubis
ENSPFOG00000001557	snd1	99	86.218	ENSPKIG00000023494	snd1	99	85.605	Paramormyrops_kingsleyae
ENSPFOG00000001557	snd1	92	93.780	ENSPMGG00000003629	snd1	100	93.780	Periophthalmus_magnuspinnatus
ENSPFOG00000001557	snd1	99	84.316	ENSPEMG00000010240	Snd1	100	83.443	Peromyscus_maniculatus_bairdii
ENSPFOG00000001557	snd1	97	74.153	ENSPMAG00000007915	-	99	74.041	Petromyzon_marinus
ENSPFOG00000001557	snd1	99	84.427	ENSPCIG00000011561	SND1	100	83.553	Phascolarctos_cinereus
ENSPFOG00000001557	snd1	100	99.780	ENSPLAG00000018459	snd1	97	99.780	Poecilia_latipinna
ENSPFOG00000001557	snd1	100	99.561	ENSPMEG00000006803	snd1	100	99.561	Poecilia_mexicana
ENSPFOG00000001557	snd1	100	98.683	ENSPREG00000002189	snd1	100	98.683	Poecilia_reticulata
ENSPFOG00000001557	snd1	91	88.889	ENSPPYG00000017972	SND1	99	88.889	Pongo_abelii
ENSPFOG00000001557	snd1	99	74.416	ENSPCAG00000011305	SND1	100	73.684	Procavia_capensis
ENSPFOG00000001557	snd1	99	84.872	ENSPCOG00000026791	SND1	100	85.006	Propithecus_coquereli
ENSPFOG00000001557	snd1	99	82.425	ENSPVAG00000013945	SND1	100	81.579	Pteropus_vampyrus
ENSPFOG00000001557	snd1	100	94.621	ENSPNYG00000000932	snd1	100	94.621	Pundamilia_nyererei
ENSPFOG00000001557	snd1	99	90.549	ENSPNAG00000001206	snd1	99	90.549	Pygocentrus_nattereri
ENSPFOG00000001557	snd1	98	84.116	ENSRNOG00000031173	Snd1	100	82.638	Rattus_norvegicus
ENSPFOG00000001557	snd1	70	88.202	ENSRBIG00000027782	-	93	88.258	Rhinopithecus_bieti
ENSPFOG00000001557	snd1	99	84.872	ENSRROG00000033020	SND1	100	83.991	Rhinopithecus_roxellana
ENSPFOG00000001557	snd1	99	84.427	ENSSBOG00000032461	SND1	100	83.553	Saimiri_boliviensis_boliviensis
ENSPFOG00000001557	snd1	98	81.011	ENSSHAG00000015359	SND1	100	81.011	Sarcophilus_harrisii
ENSPFOG00000001557	snd1	98	88.027	ENSSFOG00015001103	snd1	99	87.146	Scleropages_formosus
ENSPFOG00000001557	snd1	100	94.182	ENSSMAG00000001932	snd1	95	94.182	Scophthalmus_maximus
ENSPFOG00000001557	snd1	100	95.829	ENSSDUG00000002699	snd1	94	95.829	Seriola_dumerili
ENSPFOG00000001557	snd1	100	88.145	ENSSLDG00000001950	snd1	100	88.145	Seriola_lalandi_dorsalis
ENSPFOG00000001557	snd1	86	80.412	ENSSARG00000004877	SND1	92	80.412	Sorex_araneus
ENSPFOG00000001557	snd1	71	80.272	ENSSPUG00000017586	SND1	97	80.272	Sphenodon_punctatus
ENSPFOG00000001557	snd1	73	94.924	ENSSPAG00000021398	snd1	99	94.924	Stegastes_partitus
ENSPFOG00000001557	snd1	99	84.316	ENSSSCG00000016590	SND1	100	83.443	Sus_scrofa
ENSPFOG00000001557	snd1	100	93.289	ENSTRUG00000014067	snd1	100	92.097	Takifugu_rubripes
ENSPFOG00000001557	snd1	100	92.865	ENSTNIG00000011019	snd1	100	92.865	Tetraodon_nigroviridis
ENSPFOG00000001557	snd1	93	78.941	ENSTBEG00000003999	SND1	100	78.941	Tupaia_belangeri
ENSPFOG00000001557	snd1	99	80.200	ENSTTRG00000006059	SND1	100	79.386	Tursiops_truncatus
ENSPFOG00000001557	snd1	87	83.460	ENSUAMG00000005604	-	93	83.460	Ursus_americanus
ENSPFOG00000001557	snd1	67	77.023	ENSUAMG00000002820	-	89	77.023	Ursus_americanus
ENSPFOG00000001557	snd1	100	83.662	ENSUMAG00000005960	SND1	100	83.662	Ursus_maritimus
ENSPFOG00000001557	snd1	77	88.889	ENSVPAG00000008302	SND1	74	88.889	Vicugna_pacos
ENSPFOG00000001557	snd1	100	83.772	ENSVVUG00000007226	SND1	100	83.772	Vulpes_vulpes
ENSPFOG00000001557	snd1	97	79.932	ENSXETG00000023043	snd1	100	79.795	Xenopus_tropicalis
ENSPFOG00000001557	snd1	92	95.487	ENSXCOG00000013629	snd1	99	95.487	Xiphophorus_couchianus
ENSPFOG00000001557	snd1	100	98.793	ENSXMAG00000011469	snd1	100	98.793	Xiphophorus_maculatus