EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000001579 (Gene tree)
Gene ID: 103146314
Gene Symbol: rab12
Alias: -
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 9238 bases
Position: chrKI519766.1:161553-170790
Accession: 103146314
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000001525	MMR_HSR1	PF01926.23	4.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000001528	-	2826	-	ENSPFOP00000001525	244 (aa)	XP_007564238	A0A087X6X2

Gene Model

Click here to download ENSPFOG00000001579's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000001579's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000001579	rab12	64	40.373	ENSPFOG00000014499	si:dkey-34d22.5	72	40.373
ENSPFOG00000001579	rab12	66	46.914	ENSPFOG00000006655	rab35b	94	42.932
ENSPFOG00000001579	rab12	70	45.930	ENSPFOG00000005479	rab30	84	45.930
ENSPFOG00000001579	rab12	83	39.614	ENSPFOG00000011310	rab25b	80	42.604
ENSPFOG00000001579	rab12	83	38.095	ENSPFOG00000011316	rab11al	76	42.424
ENSPFOG00000001579	rab12	77	37.696	ENSPFOG00000011424	RAB41	73	41.026
ENSPFOG00000001579	rab12	82	46.000	ENSPFOG00000000498	-	86	49.444
ENSPFOG00000001579	rab12	83	38.679	ENSPFOG00000006224	-	80	41.667
ENSPFOG00000001579	rab12	65	35.849	ENSPFOG00000013027	rab22a	96	35.849
ENSPFOG00000001579	rab12	64	31.210	ENSPFOG00000000601	si:ch73-116o1.2	80	31.548
ENSPFOG00000001579	rab12	66	34.756	ENSPFOG00000008547	rab34a	53	34.756
ENSPFOG00000001579	rab12	65	32.704	ENSPFOG00000001515	rhebl1	85	32.704
ENSPFOG00000001579	rab12	81	36.946	ENSPFOG00000019821	RAB14	75	41.463
ENSPFOG00000001579	rab12	76	37.368	ENSPFOG00000003934	-	81	36.686
ENSPFOG00000001579	rab12	83	37.963	ENSPFOG00000006159	rab11ba	80	41.111
ENSPFOG00000001579	rab12	82	32.353	ENSPFOG00000022477	-	76	35.714
ENSPFOG00000001579	rab12	80	39.394	ENSPFOG00000006314	-	72	40.909
ENSPFOG00000001579	rab12	69	38.095	ENSPFOG00000011263	rab5aa	77	38.095
ENSPFOG00000001579	rab12	74	39.378	ENSPFOG00000000349	rab33ba	83	38.725
ENSPFOG00000001579	rab12	80	39.394	ENSPFOG00000019144	-	72	40.909
ENSPFOG00000001579	rab12	69	39.286	ENSPFOG00000005901	-	75	38.095
ENSPFOG00000001579	rab12	67	37.278	ENSPFOG00000013066	RAB29	81	37.278
ENSPFOG00000001579	rab12	69	51.479	ENSPFOG00000001829	rab1ab	83	51.479
ENSPFOG00000001579	rab12	70	40.698	ENSPFOG00000004838	rab42a	65	40.698
ENSPFOG00000001579	rab12	65	34.756	ENSPFOG00000011493	rab23	74	33.889
ENSPFOG00000001579	rab12	66	33.540	ENSPFOG00000017960	rabl2	71	33.540
ENSPFOG00000001579	rab12	64	36.250	ENSPFOG00000011444	rab34b	62	36.250
ENSPFOG00000001579	rab12	81	37.313	ENSPFOG00000010632	rab25a	91	37.313
ENSPFOG00000001579	rab12	65	41.104	ENSPFOG00000004037	rab33a	58	40.854
ENSPFOG00000001579	rab12	64	41.667	ENSPFOG00000003742	rab6ba	84	38.286
ENSPFOG00000001579	rab12	83	38.967	ENSPFOG00000009284	rab11a	95	38.967
ENSPFOG00000001579	rab12	76	37.368	ENSPFOG00000003465	RAB7A	81	36.686
ENSPFOG00000001579	rab12	71	40.462	ENSPFOG00000004746	si:dkey-16l2.16	82	40.462
ENSPFOG00000001579	rab12	70	51.163	ENSPFOG00000014418	-	84	52.381
ENSPFOG00000001579	rab12	69	49.704	ENSPFOG00000012594	rab1ba	79	49.704
ENSPFOG00000001579	rab12	70	46.512	ENSPFOG00000013810	zgc:171927	79	46.512
ENSPFOG00000001579	rab12	82	36.318	ENSPFOG00000019509	rab6a	75	42.308
ENSPFOG00000001579	rab12	61	31.126	ENSPFOG00000015499	kras	84	31.481
ENSPFOG00000001579	rab12	61	33.775	ENSPFOG00000008890	rras	73	33.537
ENSPFOG00000001579	rab12	66	34.146	ENSPFOG00000015409	si:dkey-13a21.4	79	34.146
ENSPFOG00000001579	rab12	69	37.500	ENSPFOG00000012082	rab5c	76	37.500
ENSPFOG00000001579	rab12	67	47.561	ENSPFOG00000007571	rab18a	79	47.561
ENSPFOG00000001579	rab12	63	38.788	ENSPFOG00000022360	-	68	38.788
ENSPFOG00000001579	rab12	69	37.500	ENSPFOG00000023458	rab5c	76	37.500
ENSPFOG00000001579	rab12	83	38.426	ENSPFOG00000024114	-	80	41.899
ENSPFOG00000001579	rab12	68	41.667	ENSPFOG00000004684	-	78	41.667
ENSPFOG00000001579	rab12	67	35.119	ENSPFOG00000024704	rab9a	83	35.119
ENSPFOG00000001579	rab12	67	46.951	ENSPFOG00000013491	rab18b	84	45.143
ENSPFOG00000001579	rab12	68	32.335	ENSPFOG00000004921	rheb	89	32.335
ENSPFOG00000001579	rab12	67	34.524	ENSPFOG00000020060	rab9b	83	34.524
ENSPFOG00000001579	rab12	79	40.625	ENSPFOG00000004786	rab2a	79	44.048
ENSPFOG00000001579	rab12	73	39.344	ENSPFOG00000009101	-	77	39.344
ENSPFOG00000001579	rab12	81	41.624	ENSPFOG00000017775	rab15	80	45.029
ENSPFOG00000001579	rab12	69	40.828	ENSPFOG00000014630	rab4a	79	40.828
ENSPFOG00000001579	rab12	73	41.899	ENSPFOG00000013182	RAB15	85	41.899
ENSPFOG00000001579	rab12	81	37.056	ENSPFOG00000001167	-	80	39.884
ENSPFOG00000001579	rab12	68	41.916	ENSPFOG00000004492	RAB39B	78	41.916
ENSPFOG00000001579	rab12	65	35.849	ENSPFOG00000012977	rab22a	81	35.849

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000001579	rab12	93	81.579	ENSG00000206418	RAB12	100	82.186	Homo_sapiens
ENSPFOG00000001579	rab12	89	76.256	ENSAMEG00000007452	RAB12	94	79.909	Ailuropoda_melanoleuca
ENSPFOG00000001579	rab12	100	95.902	ENSACIG00000020616	rab12	100	95.902	Amphilophus_citrinellus
ENSPFOG00000001579	rab12	100	94.262	ENSAOCG00000002130	rab12	100	94.262	Amphiprion_ocellaris
ENSPFOG00000001579	rab12	100	94.262	ENSAPEG00000013255	rab12	100	94.262	Amphiprion_percula
ENSPFOG00000001579	rab12	100	93.852	ENSATEG00000019683	rab12	100	93.852	Anabas_testudineus
ENSPFOG00000001579	rab12	82	87.500	ENSACAG00000003360	RAB12	88	85.398	Anolis_carolinensis
ENSPFOG00000001579	rab12	100	96.311	ENSACLG00000007696	rab12	100	96.311	Astatotilapia_calliptera
ENSPFOG00000001579	rab12	100	87.398	ENSAMXG00000004882	rab12	100	87.805	Astyanax_mexicanus
ENSPFOG00000001579	rab12	93	82.018	ENSBTAG00000010356	RAB12	100	82.591	Bos_taurus
ENSPFOG00000001579	rab12	93	82.018	ENSCJAG00000015468	RAB12	72	82.186	Callithrix_jacchus
ENSPFOG00000001579	rab12	93	81.579	ENSCAFG00020023721	RAB12	84	82.186	Canis_lupus_dingo
ENSPFOG00000001579	rab12	93	82.018	ENSCHIG00000016103	RAB12	100	82.591	Capra_hircus
ENSPFOG00000001579	rab12	85	85.238	ENSCPOG00000022689	RAB12	100	87.619	Cavia_porcellus
ENSPFOG00000001579	rab12	93	82.018	ENSCCAG00000022862	RAB12	100	81.781	Cebus_capucinus
ENSPFOG00000001579	rab12	91	82.589	ENSCATG00000037784	RAB12	93	85.778	Cercocebus_atys
ENSPFOG00000001579	rab12	84	86.829	ENSCSAG00000017569	RAB12	72	81.855	Chlorocebus_sabaeus
ENSPFOG00000001579	rab12	93	81.304	ENSCPBG00000028375	RAB12	92	85.841	Chrysemys_picta_bellii
ENSPFOG00000001579	rab12	89	82.648	ENSCANG00000031453	RAB12	99	86.301	Colobus_angolensis_palliatus
ENSPFOG00000001579	rab12	93	82.895	ENSCGRG00001006958	Rab12	83	81.781	Cricetulus_griseus_chok1gshd
ENSPFOG00000001579	rab12	100	94.672	ENSCSEG00000016933	rab12	100	94.672	Cynoglossus_semilaevis
ENSPFOG00000001579	rab12	100	96.341	ENSCVAG00000003539	rab12	100	96.341	Cyprinodon_variegatus
ENSPFOG00000001579	rab12	100	86.066	ENSDARG00000089428	rab12	95	91.031	Danio_rerio
ENSPFOG00000001579	rab12	84	86.341	ENSDNOG00000046064	RAB12	52	85.333	Dasypus_novemcinctus
ENSPFOG00000001579	rab12	91	82.589	ENSDORG00000008920	Rab12	99	85.398	Dipodomys_ordii
ENSPFOG00000001579	rab12	77	65.608	ENSEBUG00000006581	rab12	92	64.583	Eptatretus_burgeri
ENSPFOG00000001579	rab12	93	81.579	ENSEASG00005002926	RAB12	83	81.377	Equus_asinus_asinus
ENSPFOG00000001579	rab12	93	81.579	ENSECAG00000007384	RAB12	71	81.377	Equus_caballus
ENSPFOG00000001579	rab12	100	88.525	ENSELUG00000007123	rab12	100	88.115	Esox_lucius
ENSPFOG00000001579	rab12	93	81.579	ENSFCAG00000027710	RAB12	72	82.186	Felis_catus
ENSPFOG00000001579	rab12	100	95.918	ENSFHEG00000004319	rab12	100	95.918	Fundulus_heteroclitus
ENSPFOG00000001579	rab12	86	90.952	ENSGMOG00000012335	rab12	87	90.476	Gadus_morhua
ENSPFOG00000001579	rab12	91	82.589	ENSGALG00000033608	RAB12	90	85.398	Gallus_gallus
ENSPFOG00000001579	rab12	90	91.324	ENSGACG00000016639	rab12	100	91.324	Gasterosteus_aculeatus
ENSPFOG00000001579	rab12	93	81.304	ENSGAGG00000007278	RAB12	92	85.841	Gopherus_agassizii
ENSPFOG00000001579	rab12	100	96.311	ENSHBUG00000008497	rab12	100	96.311	Haplochromis_burtoni
ENSPFOG00000001579	rab12	96	80.169	ENSHGLG00000006189	RAB12	86	86.425	Heterocephalus_glaber_female
ENSPFOG00000001579	rab12	100	89.388	ENSHCOG00000012376	rab12	100	88.115	Hippocampus_comes
ENSPFOG00000001579	rab12	100	87.295	ENSIPUG00000017401	rab12	100	87.295	Ictalurus_punctatus
ENSPFOG00000001579	rab12	89	82.192	ENSSTOG00000025122	RAB12	96	85.845	Ictidomys_tridecemlineatus
ENSPFOG00000001579	rab12	91	82.589	ENSJJAG00000019064	Rab12	99	85.778	Jaculus_jaculus
ENSPFOG00000001579	rab12	100	90.574	ENSKMAG00000020056	rab12	100	90.164	Kryptolebias_marmoratus
ENSPFOG00000001579	rab12	100	95.082	ENSLBEG00000013756	rab12	100	95.082	Labrus_bergylta
ENSPFOG00000001579	rab12	90	86.547	ENSLACG00000010461	RAB12	91	85.841	Latimeria_chalumnae
ENSPFOG00000001579	rab12	100	83.468	ENSLOCG00000002680	rab12	100	85.484	Lepisosteus_oculatus
ENSPFOG00000001579	rab12	93	81.057	ENSMFAG00000043551	RAB12	100	80.894	Macaca_fascicularis
ENSPFOG00000001579	rab12	84	86.829	ENSMNEG00000040853	RAB12	89	85.778	Macaca_nemestrina
ENSPFOG00000001579	rab12	100	93.852	ENSMAMG00000006862	rab12	100	93.852	Mastacembelus_armatus
ENSPFOG00000001579	rab12	100	96.311	ENSMZEG00005024316	rab12	100	96.311	Maylandia_zebra
ENSPFOG00000001579	rab12	83	82.843	ENSMGAG00000009197	RAB12	100	86.765	Meleagris_gallopavo
ENSPFOG00000001579	rab12	93	82.895	ENSMAUG00000008371	Rab12	83	81.781	Mesocricetus_auratus
ENSPFOG00000001579	rab12	91	82.143	ENSMICG00000030661	RAB12	94	85.333	Microcebus_murinus
ENSPFOG00000001579	rab12	89	83.105	ENSMOCG00000000452	Rab12	100	86.758	Microtus_ochrogaster
ENSPFOG00000001579	rab12	84	87.317	ENSMODG00000021452	RAB12	67	86.222	Monodelphis_domestica
ENSPFOG00000001579	rab12	100	91.393	ENSMALG00000015762	rab12	100	91.393	Monopterus_albus
ENSPFOG00000001579	rab12	93	83.333	MGP_CAROLIEiJ_G0021839	Rab12	84	81.781	Mus_caroli
ENSPFOG00000001579	rab12	93	83.333	ENSMUSG00000023460	Rab12	100	81.781	Mus_musculus
ENSPFOG00000001579	rab12	93	83.333	MGP_PahariEiJ_G0020826	Rab12	100	81.781	Mus_pahari
ENSPFOG00000001579	rab12	93	83.333	MGP_SPRETEiJ_G0022750	Rab12	83	81.781	Mus_spretus
ENSPFOG00000001579	rab12	100	78.138	ENSMLUG00000002883	RAB12	100	81.377	Myotis_lucifugus
ENSPFOG00000001579	rab12	94	79.828	ENSNGAG00000024103	-	96	85.333	Nannospalax_galili
ENSPFOG00000001579	rab12	91	75.446	ENSNGAG00000019722	-	92	75.111	Nannospalax_galili
ENSPFOG00000001579	rab12	100	96.311	ENSNBRG00000014428	rab12	100	96.311	Neolamprologus_brichardi
ENSPFOG00000001579	rab12	93	81.579	ENSNLEG00000006939	RAB12	100	81.781	Nomascus_leucogenys
ENSPFOG00000001579	rab12	100	78.629	ENSMEUG00000000493	RAB12	91	86.222	Notamacropus_eugenii
ENSPFOG00000001579	rab12	89	83.562	ENSODEG00000006414	RAB12	100	87.215	Octodon_degus
ENSPFOG00000001579	rab12	100	96.311	ENSONIG00000018469	rab12	100	96.311	Oreochromis_niloticus
ENSPFOG00000001579	rab12	100	93.852	ENSORLG00000003902	rab12	100	93.852	Oryzias_latipes
ENSPFOG00000001579	rab12	100	94.262	ENSORLG00020005131	rab12	100	94.262	Oryzias_latipes_hni
ENSPFOG00000001579	rab12	100	93.852	ENSORLG00015007869	rab12	100	93.852	Oryzias_latipes_hsok
ENSPFOG00000001579	rab12	100	95.902	ENSOMEG00000008191	rab12	100	95.902	Oryzias_melastigma
ENSPFOG00000001579	rab12	85	82.857	ENSOGAG00000028002	RAB12	99	86.667	Otolemur_garnettii
ENSPFOG00000001579	rab12	78	87.435	ENSOARG00000000728	RAB12	88	85.581	Ovis_aries
ENSPFOG00000001579	rab12	84	82.609	ENSPPAG00000009152	RAB12	97	86.893	Pan_paniscus
ENSPFOG00000001579	rab12	93	81.579	ENSPPRG00000024521	RAB12	100	82.186	Panthera_pardus
ENSPFOG00000001579	rab12	93	81.579	ENSPTRG00000009853	RAB12	100	82.186	Pan_troglodytes
ENSPFOG00000001579	rab12	93	82.895	ENSPANG00000009320	RAB12	100	82.591	Papio_anubis
ENSPFOG00000001579	rab12	100	86.531	ENSPKIG00000008579	rab12	100	86.939	Paramormyrops_kingsleyae
ENSPFOG00000001579	rab12	100	90.164	ENSPMGG00000001890	rab12	100	90.574	Periophthalmus_magnuspinnatus
ENSPFOG00000001579	rab12	93	82.456	ENSPEMG00000021032	Rab12	84	81.377	Peromyscus_maniculatus_bairdii
ENSPFOG00000001579	rab12	88	84.793	ENSPCIG00000010453	RAB12	56	86.222	Phascolarctos_cinereus
ENSPFOG00000001579	rab12	100	100.000	ENSPLAG00000013594	rab12	100	100.000	Poecilia_latipinna
ENSPFOG00000001579	rab12	100	100.000	ENSPMEG00000010417	rab12	100	100.000	Poecilia_mexicana
ENSPFOG00000001579	rab12	100	99.590	ENSPREG00000017487	rab12	100	99.590	Poecilia_reticulata
ENSPFOG00000001579	rab12	93	81.579	ENSPPYG00000009015	-	72	82.186	Pongo_abelii
ENSPFOG00000001579	rab12	93	81.579	ENSPCAG00000015007	RAB12	100	81.781	Procavia_capensis
ENSPFOG00000001579	rab12	93	81.579	ENSPCOG00000019816	RAB12	100	82.186	Propithecus_coquereli
ENSPFOG00000001579	rab12	93	82.018	ENSPVAG00000002757	RAB12	100	82.591	Pteropus_vampyrus
ENSPFOG00000001579	rab12	100	96.311	ENSPNYG00000023905	rab12	100	96.311	Pundamilia_nyererei
ENSPFOG00000001579	rab12	100	96.311	ENSPNYG00000005654	rab12	100	96.311	Pundamilia_nyererei
ENSPFOG00000001579	rab12	100	86.585	ENSPNAG00000015031	rab12	100	86.992	Pygocentrus_nattereri
ENSPFOG00000001579	rab12	93	80.786	ENSRNOG00000019295	Rab12	91	79.913	Rattus_norvegicus
ENSPFOG00000001579	rab12	91	82.589	ENSRBIG00000028760	RAB12	97	85.778	Rhinopithecus_bieti
ENSPFOG00000001579	rab12	91	82.589	ENSRROG00000019249	RAB12	94	85.778	Rhinopithecus_roxellana
ENSPFOG00000001579	rab12	94	77.489	ENSSBOG00000021125	RAB12	80	86.603	Saimiri_boliviensis_boliviensis
ENSPFOG00000001579	rab12	93	81.579	ENSSHAG00000001489	RAB12	91	86.341	Sarcophilus_harrisii
ENSPFOG00000001579	rab12	100	92.623	ENSSMAG00000012678	rab12	100	92.623	Scophthalmus_maximus
ENSPFOG00000001579	rab12	100	94.672	ENSSDUG00000008505	rab12	100	94.672	Seriola_dumerili
ENSPFOG00000001579	rab12	100	94.672	ENSSLDG00000022239	rab12	100	94.672	Seriola_lalandi_dorsalis
ENSPFOG00000001579	rab12	83	87.745	ENSSPUG00000003222	RAB12	92	86.283	Sphenodon_punctatus
ENSPFOG00000001579	rab12	100	94.672	ENSSPAG00000010822	rab12	100	94.672	Stegastes_partitus
ENSPFOG00000001579	rab12	100	80.162	ENSSSCG00000038026	RAB12	100	82.591	Sus_scrofa
ENSPFOG00000001579	rab12	93	81.385	ENSTGUG00000009889	RAB12	100	81.200	Taeniopygia_guttata
ENSPFOG00000001579	rab12	100	90.164	ENSTRUG00000024455	rab12	100	89.754	Takifugu_rubripes
ENSPFOG00000001579	rab12	100	91.803	ENSTNIG00000014859	rab12	100	91.393	Tetraodon_nigroviridis
ENSPFOG00000001579	rab12	89	82.648	ENSTTRG00000008711	RAB12	99	86.301	Tursiops_truncatus
ENSPFOG00000001579	rab12	93	81.579	ENSUAMG00000018092	RAB12	100	82.186	Ursus_americanus
ENSPFOG00000001579	rab12	90	81.900	ENSVVUG00000011748	RAB12	99	85.520	Vulpes_vulpes
ENSPFOG00000001579	rab12	95	82.128	ENSXETG00000004289	rab12	79	81.855	Xenopus_tropicalis
ENSPFOG00000001579	rab12	100	97.541	ENSXCOG00000019310	rab12	100	97.541	Xiphophorus_couchianus
ENSPFOG00000001579	rab12	100	97.951	ENSXMAG00000023617	rab12	100	97.951	Xiphophorus_maculatus