EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000001606 (Gene tree)
Gene ID: 103132058
Gene Symbol: -
Alias: -
Full Name: helicase with zinc finger 2
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 21281 bases
Position: chrKI520520.1:8794-30074
Accession: 103132058
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000024425	RNB	PF00773.19	1.8e-59	1	1
ENSPFOP00000001655	RNB	PF00773.19	2.1e-59	1	1
ENSPFOP00000021579	RNB	PF00773.19	2.2e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000027448	-	10208	-	ENSPFOP00000024425	2190 (aa)	-	A0A096LZ34
ENSPFOT00000001658	-	7205	XM_016667127	ENSPFOP00000001655	2342 (aa)	XP_016522613	A0A087X7A2
ENSPFOT00000031486	-	7145	-	ENSPFOP00000021579	2367 (aa)	-	A0A096LQY8

Gene Model

Click here to download ENSPFOG00000001606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000001606's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000001606	-	100	63.930	ENSAPOG00000023564	-	81	63.051	Acanthochromis_polyacanthus
ENSPFOG00000001606	-	99	58.771	ENSACIG00000009644	-	98	64.017	Amphilophus_citrinellus
ENSPFOG00000001606	-	100	64.809	ENSAOCG00000005001	-	81	64.075	Amphiprion_ocellaris
ENSPFOG00000001606	-	100	64.513	ENSAPEG00000002204	-	81	64.033	Amphiprion_percula
ENSPFOG00000001606	-	100	61.450	ENSATEG00000002831	-	81	60.671	Anabas_testudineus
ENSPFOG00000001606	-	100	58.646	ENSACLG00000026636	-	97	57.723	Astatotilapia_calliptera
ENSPFOG00000001606	-	100	51.296	ENSCSEG00000013505	-	85	51.005	Cynoglossus_semilaevis
ENSPFOG00000001606	-	99	68.537	ENSCVAG00000009143	-	81	70.408	Cyprinodon_variegatus
ENSPFOG00000001606	-	96	53.279	ENSGMOG00000015715	-	91	53.279	Gadus_morhua
ENSPFOG00000001606	-	100	58.428	ENSGACG00000011518	-	93	58.247	Gasterosteus_aculeatus
ENSPFOG00000001606	-	100	58.811	ENSHBUG00000011353	-	84	57.406	Haplochromis_burtoni
ENSPFOG00000001606	-	100	67.402	ENSKMAG00000017824	-	81	66.889	Kryptolebias_marmoratus
ENSPFOG00000001606	-	99	56.572	ENSLBEG00000004602	-	83	56.572	Labrus_bergylta
ENSPFOG00000001606	-	100	59.619	ENSMAMG00000023766	-	81	58.726	Mastacembelus_armatus
ENSPFOG00000001606	-	100	58.811	ENSMZEG00005005021	-	85	57.445	Maylandia_zebra
ENSPFOG00000001606	-	100	61.770	ENSMALG00000015934	-	82	61.063	Monopterus_albus
ENSPFOG00000001606	-	99	57.452	ENSNBRG00000018910	-	86	57.399	Neolamprologus_brichardi
ENSPFOG00000001606	-	100	59.064	ENSONIG00000003110	-	85	59.013	Oreochromis_niloticus
ENSPFOG00000001606	-	100	60.616	ENSORLG00000010672	-	81	59.817	Oryzias_latipes
ENSPFOG00000001606	-	100	60.118	ENSORLG00020004477	-	81	59.535	Oryzias_latipes_hni
ENSPFOG00000001606	-	100	60.616	ENSORLG00015022035	-	81	59.817	Oryzias_latipes_hsok
ENSPFOG00000001606	-	100	59.375	ENSOMEG00000001349	-	81	58.451	Oryzias_melastigma
ENSPFOG00000001606	-	98	94.041	ENSPLAG00000011020	-	82	94.041	Poecilia_latipinna
ENSPFOG00000001606	-	100	97.523	ENSPMEG00000014289	-	80	97.523	Poecilia_mexicana
ENSPFOG00000001606	-	98	91.639	ENSPREG00000013870	-	91	91.639	Poecilia_reticulata
ENSPFOG00000001606	-	100	58.811	ENSPNYG00000007526	-	85	57.617	Pundamilia_nyererei
ENSPFOG00000001606	-	100	62.442	ENSSDUG00000007057	-	81	61.615	Seriola_dumerili
ENSPFOG00000001606	-	99	62.063	ENSSLDG00000020104	-	99	61.883	Seriola_lalandi_dorsalis
ENSPFOG00000001606	-	100	65.193	ENSSPAG00000003658	-	81	64.327	Stegastes_partitus
ENSPFOG00000001606	-	90	53.380	ENSTRUG00000009427	-	98	53.380	Takifugu_rubripes
ENSPFOG00000001606	-	99	54.410	ENSTNIG00000003119	-	93	54.410	Tetraodon_nigroviridis
ENSPFOG00000001606	-	100	86.434	ENSXCOG00000003833	-	86	86.434	Xiphophorus_couchianus
ENSPFOG00000001606	-	99	86.088	ENSXMAG00000009019	-	85	86.088	Xiphophorus_maculatus