EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000001959 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 10466 bases
Position: chrKI519999.1:394566-405031
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000026874	RRM_1	PF00076.22	1e-21	1	2
ENSPFOP00000026874	RRM_1	PF00076.22	1e-21	2	2
ENSPFOP00000001863	RRM_1	PF00076.22	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000001867	-	1020	-	ENSPFOP00000001863	269 (aa)	-	A0A087X7W0
ENSPFOT00000024296	-	1545	-	ENSPFOP00000026874	448 (aa)	-	A0A096M633

Gene Model

Click here to download ENSPFOG00000001959's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000001959's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000001959	-	62	45.126	ENSPFOG00000014895	-	77	40.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000001959	-	100	79.412	ENSAPEG00000002239	-	79	72.576	Amphiprion_percula
ENSPFOG00000001959	-	77	70.822	ENSCSAG00000015908	-	56	47.315	Chlorocebus_sabaeus
ENSPFOG00000001959	-	61	80.212	ENSMUSG00000032621	Srek1	91	76.111	Mus_musculus
ENSPFOG00000001959	-	80	51.121	ENSOGAG00000030859	-	53	68.715	Otolemur_garnettii
ENSPFOG00000001959	-	62	41.516	ENSPNAG00000018440	-	76	39.326	Pygocentrus_nattereri