EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000001974 (Gene tree)
Gene ID: 103147702
Gene Symbol: zgc:171482
Alias: -
Full Name: zinc finger matrin-type protein 4-like
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 72770 bases
Position: chrKI519798.1:219345-292114
Accession: 103147702
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000001882	zf-met	PF12874.7	1.6e-25	1	4
ENSPFOP00000001882	zf-met	PF12874.7	1.6e-25	2	4
ENSPFOP00000001882	zf-met	PF12874.7	1.6e-25	3	4
ENSPFOP00000001882	zf-met	PF12874.7	1.6e-25	4	4
ENSPFOP00000001882	zf-C2H2_jaz	PF12171.8	5.4e-20	1	2
ENSPFOP00000001882	zf-C2H2_jaz	PF12171.8	5.4e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000001886	-	6309	-	ENSPFOP00000001882	248 (aa)	XP_007566233	A0A087X7X9

Gene Model

Click here to download ENSPFOG00000001974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000001974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000001974	zgc:171482	95	44.304	ENSPFOG00000018088	znf346	62	44.304
ENSPFOG00000001974	zgc:171482	98	61.885	ENSPFOG00000006742	zmat4a	87	61.885

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000001974	zgc:171482	96	86.192	ENSAPOG00000019970	zgc:171482	99	86.192	Acanthochromis_polyacanthus
ENSPFOG00000001974	zgc:171482	78	97.500	ENSACIG00000021512	zgc:171482	90	97.500	Amphilophus_citrinellus
ENSPFOG00000001974	zgc:171482	78	97.581	ENSAOCG00000000751	zgc:171482	91	97.581	Amphiprion_ocellaris
ENSPFOG00000001974	zgc:171482	79	92.593	ENSAPEG00000014154	zgc:171482	97	92.593	Amphiprion_percula
ENSPFOG00000001974	zgc:171482	96	85.774	ENSATEG00000001371	zgc:171482	99	87.866	Anabas_testudineus
ENSPFOG00000001974	zgc:171482	78	96.000	ENSACLG00000010511	zgc:171482	87	96.000	Astatotilapia_calliptera
ENSPFOG00000001974	zgc:171482	96	79.916	ENSAMXG00000002299	zgc:171482	99	82.427	Astyanax_mexicanus
ENSPFOG00000001974	zgc:171482	96	94.167	ENSCSEG00000006509	zgc:171482	99	94.167	Cynoglossus_semilaevis
ENSPFOG00000001974	zgc:171482	96	87.029	ENSCVAG00000013606	zgc:171482	99	87.029	Cyprinodon_variegatus
ENSPFOG00000001974	zgc:171482	99	83.333	ENSDARG00000074415	zgc:171482	99	95.455	Danio_rerio
ENSPFOG00000001974	zgc:171482	79	61.616	ENSELUG00000017517	-	60	84.444	Esox_lucius
ENSPFOG00000001974	zgc:171482	78	92.623	ENSELUG00000021817	zgc:171482	96	88.722	Esox_lucius
ENSPFOG00000001974	zgc:171482	54	70.345	ENSELUG00000021794	-	93	74.483	Esox_lucius
ENSPFOG00000001974	zgc:171482	88	97.638	ENSFHEG00000002233	zgc:171482	91	97.638	Fundulus_heteroclitus
ENSPFOG00000001974	zgc:171482	96	84.100	ENSGMOG00000010508	zgc:171482	99	84.100	Gadus_morhua
ENSPFOG00000001974	zgc:171482	96	99.167	ENSGAFG00000009398	zgc:171482	99	99.167	Gambusia_affinis
ENSPFOG00000001974	zgc:171482	96	88.703	ENSGACG00000007680	zgc:171482	99	88.703	Gasterosteus_aculeatus
ENSPFOG00000001974	zgc:171482	79	96.063	ENSHBUG00000023289	zgc:171482	95	96.063	Haplochromis_burtoni
ENSPFOG00000001974	zgc:171482	78	91.270	ENSHCOG00000018086	zgc:171482	94	91.270	Hippocampus_comes
ENSPFOG00000001974	zgc:171482	54	76.866	ENSIPUG00000000356	-	82	81.452	Ictalurus_punctatus
ENSPFOG00000001974	zgc:171482	79	94.017	ENSIPUG00000000361	zgc:171482	85	94.017	Ictalurus_punctatus
ENSPFOG00000001974	zgc:171482	98	86.008	ENSKMAG00000005077	zgc:171482	87	86.008	Kryptolebias_marmoratus
ENSPFOG00000001974	zgc:171482	78	95.276	ENSLBEG00000023823	zgc:171482	89	96.800	Labrus_bergylta
ENSPFOG00000001974	zgc:171482	97	80.417	ENSLOCG00000008863	zgc:171482	97	83.333	Lepisosteus_oculatus
ENSPFOG00000001974	zgc:171482	96	96.800	ENSMAMG00000001031	zgc:171482	80	96.850	Mastacembelus_armatus
ENSPFOG00000001974	zgc:171482	96	84.519	ENSMZEG00005027721	zgc:171482	99	84.519	Maylandia_zebra
ENSPFOG00000001974	zgc:171482	78	96.094	ENSMMOG00000010523	zgc:171482	98	96.094	Mola_mola
ENSPFOG00000001974	zgc:171482	96	87.029	ENSMALG00000017883	zgc:171482	99	88.285	Monopterus_albus
ENSPFOG00000001974	zgc:171482	78	95.041	ENSNBRG00000021035	zgc:171482	90	95.041	Neolamprologus_brichardi
ENSPFOG00000001974	zgc:171482	98	90.083	ENSONIG00000018365	zgc:171482	99	90.083	Oreochromis_niloticus
ENSPFOG00000001974	zgc:171482	96	86.192	ENSORLG00000007607	zgc:171482	99	89.286	Oryzias_latipes
ENSPFOG00000001974	zgc:171482	96	83.884	ENSORLG00020003563	zgc:171482	99	88.571	Oryzias_latipes_hni
ENSPFOG00000001974	zgc:171482	96	86.192	ENSORLG00015008552	zgc:171482	99	86.192	Oryzias_latipes_hsok
ENSPFOG00000001974	zgc:171482	79	97.638	ENSOMEG00000003526	zgc:171482	89	97.638	Oryzias_melastigma
ENSPFOG00000001974	zgc:171482	78	95.690	ENSPKIG00000015911	-	81	95.690	Paramormyrops_kingsleyae
ENSPFOG00000001974	zgc:171482	96	90.947	ENSPMGG00000020230	zgc:171482	100	90.947	Periophthalmus_magnuspinnatus
ENSPFOG00000001974	zgc:171482	96	90.377	ENSPLAG00000003327	zgc:171482	99	90.377	Poecilia_latipinna
ENSPFOG00000001974	zgc:171482	96	85.417	ENSPMEG00000004988	zgc:171482	99	85.417	Poecilia_mexicana
ENSPFOG00000001974	zgc:171482	78	100.000	ENSPREG00000019241	zgc:171482	91	100.000	Poecilia_reticulata
ENSPFOG00000001974	zgc:171482	78	96.000	ENSPNYG00000007773	zgc:171482	87	96.000	Pundamilia_nyererei
ENSPFOG00000001974	zgc:171482	99	81.301	ENSPNAG00000007619	zgc:171482	100	86.179	Pygocentrus_nattereri
ENSPFOG00000001974	zgc:171482	78	81.818	ENSSFOG00015021238	zgc:171482	92	80.282	Scleropages_formosus
ENSPFOG00000001974	zgc:171482	79	93.284	ENSSMAG00000002715	zgc:171482	86	93.284	Scophthalmus_maximus
ENSPFOG00000001974	zgc:171482	78	98.400	ENSSDUG00000008773	zgc:171482	88	98.400	Seriola_dumerili
ENSPFOG00000001974	zgc:171482	78	98.400	ENSSLDG00000019510	zgc:171482	88	98.400	Seriola_lalandi_dorsalis
ENSPFOG00000001974	zgc:171482	78	97.581	ENSSPAG00000013724	zgc:171482	98	97.581	Stegastes_partitus
ENSPFOG00000001974	zgc:171482	83	92.742	ENSTRUG00000005705	zgc:171482	73	92.742	Takifugu_rubripes
ENSPFOG00000001974	zgc:171482	96	76.151	ENSTNIG00000008679	zgc:171482	99	76.151	Tetraodon_nigroviridis
ENSPFOG00000001974	zgc:171482	82	58.278	ENSXETG00000013525	zmat4	83	60.284	Xenopus_tropicalis
ENSPFOG00000001974	zgc:171482	96	88.430	ENSXMAG00000002641	zgc:171482	99	88.430	Xiphophorus_maculatus