EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000001988 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 3047 bases
Position: chrKI519907.1:48109-51155
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000001851	RnaseA	PF00074.20	3e-17	1	1
ENSPFOP00000024644	RnaseA	PF00074.20	5.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000001855	-	375	-	ENSPFOP00000001851	125 (aa)	-	A0A087X7U8
ENSPFOT00000029179	-	432	-	ENSPFOP00000024644	144 (aa)	-	A0A096LZQ3

Gene Model

Click here to download ENSPFOG00000001988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000001988's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000001988	-	93	42.735	ENSPFOG00000000984	-	91	41.739
ENSPFOG00000001988	-	93	42.735	ENSPFOG00000020379	-	71	42.735
ENSPFOG00000001988	-	93	35.345	ENSPFOG00000024337	-	77	35.345
ENSPFOG00000001988	-	94	39.831	ENSPFOG00000021872	-	73	39.831
ENSPFOG00000001988	-	94	39.831	ENSPFOG00000020382	-	77	39.831

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000001988	-	92	37.931	ENSCVAG00000010919	-	85	37.931	Cyprinodon_variegatus
ENSPFOG00000001988	-	92	37.391	ENSFHEG00000010251	-	67	37.288	Fundulus_heteroclitus
ENSPFOG00000001988	-	94	35.772	ENSPLAG00000003823	-	80	35.772	Poecilia_latipinna
ENSPFOG00000001988	-	93	41.880	ENSPLAG00000003830	-	85	41.880	Poecilia_latipinna
ENSPFOG00000001988	-	82	33.654	ENSPLAG00000006697	-	54	33.654	Poecilia_latipinna
ENSPFOG00000001988	-	77	87.500	ENSPMEG00000010403	-	75	87.500	Poecilia_mexicana
ENSPFOG00000001988	-	93	42.735	ENSPMEG00000022740	-	85	42.735	Poecilia_mexicana
ENSPFOG00000001988	-	93	41.026	ENSPMEG00000010387	-	86	38.281	Poecilia_mexicana
ENSPFOG00000001988	-	92	37.931	ENSPMEG00000006775	-	88	37.931	Poecilia_mexicana
ENSPFOG00000001988	-	94	33.898	ENSPMEG00000010366	-	63	33.898	Poecilia_mexicana
ENSPFOG00000001988	-	90	34.821	ENSPREG00000012794	-	75	34.821	Poecilia_reticulata
ENSPFOG00000001988	-	93	41.880	ENSPREG00000012805	-	85	41.880	Poecilia_reticulata
ENSPFOG00000001988	-	93	39.316	ENSXMAG00000000421	-	83	39.316	Xiphophorus_maculatus