EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000002008 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 47043 bases
Position: chrKI519733.1:73306-120348
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000026860	ResIII	PF04851.15	6.4e-19	1	1
ENSPFOP00000027444	ResIII	PF04851.15	1.2e-14	1	1
ENSPFOP00000026860	DEAD	PF00270.29	2.5e-19	1	1
ENSPFOP00000027444	DEAD	PF00270.29	2.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000028765	-	6617	-	ENSPFOP00000026860	1978 (aa)	-	A0A096M619
ENSPFOT00000002118	-	5214	-	ENSPFOP00000002114	1463 (aa)	-	A0A087X8L1
ENSPFOT00000025027	-	6671	-	ENSPFOP00000027444	1996 (aa)	-	A0A096M7Q3

Gene Model

Click here to download ENSPFOG00000002008's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000002008's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000002008	-	77	63.333	ENSG00000187790	FANCM	97	62.481	Homo_sapiens
ENSPFOG00000002008	-	83	82.182	ENSATEG00000012412	-	80	82.182	Anabas_testudineus
ENSPFOG00000002008	-	99	40.583	ENSANAG00000025075	FANCM	76	50.313	Aotus_nancymaae
ENSPFOG00000002008	-	85	82.222	ENSACLG00000016008	-	85	82.222	Astatotilapia_calliptera
ENSPFOG00000002008	-	68	69.284	ENSAMXG00000020275	-	75	69.284	Astyanax_mexicanus
ENSPFOG00000002008	-	99	39.591	ENSBTAG00000002612	FANCM	95	60.504	Bos_taurus
ENSPFOG00000002008	-	88	50.000	ENSCAFG00000014062	FANCM	56	60.388	Canis_familiaris
ENSPFOG00000002008	-	81	48.828	ENSCPOG00000001446	FANCM	72	48.532	Cavia_porcellus
ENSPFOG00000002008	-	99	40.204	ENSCCAG00000026593	FANCM	99	39.767	Cebus_capucinus
ENSPFOG00000002008	-	99	41.205	ENSCATG00000031379	FANCM	81	42.164	Cercocebus_atys
ENSPFOG00000002008	-	99	40.517	ENSCSAG00000015308	FANCM	81	41.810	Chlorocebus_sabaeus
ENSPFOG00000002008	-	65	58.564	ENSCPBG00000015089	FANCM	64	58.564	Chrysemys_picta_bellii
ENSPFOG00000002008	-	99	41.254	ENSCANG00000029498	FANCM	80	42.634	Colobus_angolensis_palliatus
ENSPFOG00000002008	-	94	54.953	ENSCGRG00001023573	Fancm	91	44.240	Cricetulus_griseus_chok1gshd
ENSPFOG00000002008	-	84	77.964	ENSCSEG00000002313	-	84	77.964	Cynoglossus_semilaevis
ENSPFOG00000002008	-	82	81.997	ENSCVAG00000015579	-	93	82.444	Cyprinodon_variegatus
ENSPFOG00000002008	-	90	49.661	ENSDNOG00000007697	FANCM	68	60.411	Dasypus_novemcinctus
ENSPFOG00000002008	-	75	61.026	ENSDORG00000010095	Fancm	77	55.368	Dipodomys_ordii
ENSPFOG00000002008	-	99	40.242	ENSEASG00005007781	FANCM	97	63.020	Equus_asinus_asinus
ENSPFOG00000002008	-	98	40.092	ENSECAG00000018694	FANCM	80	44.700	Equus_caballus
ENSPFOG00000002008	-	61	66.667	ENSEEUG00000005607	-	61	66.667	Erinaceus_europaeus
ENSPFOG00000002008	-	75	69.074	ENSELUG00000015761	-	82	69.126	Esox_lucius
ENSPFOG00000002008	-	76	54.098	ENSFALG00000001703	FANCM	71	54.098	Ficedula_albicollis
ENSPFOG00000002008	-	99	39.137	ENSFDAG00000009043	FANCM	94	45.673	Fukomys_damarensis
ENSPFOG00000002008	-	81	72.496	ENSGMOG00000002019	-	73	72.496	Gadus_morhua
ENSPFOG00000002008	-	67	56.275	ENSGALG00000031182	FANCM	53	49.771	Gallus_gallus
ENSPFOG00000002008	-	84	75.664	ENSGACG00000009448	-	83	75.664	Gasterosteus_aculeatus
ENSPFOG00000002008	-	99	41.242	ENSGGOG00000008546	FANCM	81	42.187	Gorilla_gorilla
ENSPFOG00000002008	-	82	81.944	ENSHBUG00000007085	-	85	81.944	Haplochromis_burtoni
ENSPFOG00000002008	-	99	39.316	ENSHGLG00000013787	FANCM	94	45.673	Heterocephalus_glaber_female
ENSPFOG00000002008	-	99	39.483	ENSHGLG00100006377	FANCM	94	45.673	Heterocephalus_glaber_male
ENSPFOG00000002008	-	79	69.722	ENSIPUG00000014629	fancm	84	69.722	Ictalurus_punctatus
ENSPFOG00000002008	-	73	77.872	ENSLBEG00000004982	-	80	76.975	Labrus_bergylta
ENSPFOG00000002008	-	82	58.365	ENSLACG00000007739	FANCM	82	57.519	Latimeria_chalumnae
ENSPFOG00000002008	-	82	70.083	ENSLOCG00000011318	FANCM	79	70.083	Lepisosteus_oculatus
ENSPFOG00000002008	-	89	49.029	ENSLAFG00000001136	FANCM	59	48.783	Loxodonta_africana
ENSPFOG00000002008	-	99	40.874	ENSMFAG00000000383	FANCM	81	41.672	Macaca_fascicularis
ENSPFOG00000002008	-	99	40.825	ENSMMUG00000016513	FANCM	81	41.672	Macaca_mulatta
ENSPFOG00000002008	-	99	40.825	ENSMNEG00000038659	FANCM	81	41.672	Macaca_nemestrina
ENSPFOG00000002008	-	96	56.812	ENSMLEG00000035743	FANCM	79	56.812	Mandrillus_leucophaeus
ENSPFOG00000002008	-	84	81.032	ENSMAMG00000007087	-	84	81.032	Mastacembelus_armatus
ENSPFOG00000002008	-	84	82.222	ENSMZEG00005004644	-	85	82.222	Maylandia_zebra
ENSPFOG00000002008	-	99	37.898	ENSMAUG00000015450	Fancm	91	45.161	Mesocricetus_auratus
ENSPFOG00000002008	-	99	40.757	ENSMICG00000005811	FANCM	89	47.126	Microcebus_murinus
ENSPFOG00000002008	-	94	42.857	ENSMOCG00000008775	Fancm	66	61.872	Microtus_ochrogaster
ENSPFOG00000002008	-	80	75.448	ENSMMOG00000010215	-	87	75.448	Mola_mola
ENSPFOG00000002008	-	75	57.830	ENSMODG00000007334	FANCM	69	53.383	Monodelphis_domestica
ENSPFOG00000002008	-	67	59.116	MGP_CAROLIEiJ_G0017791	Fancm	58	58.978	Mus_caroli
ENSPFOG00000002008	-	75	60.140	ENSMUSG00000055884	Fancm	95	60.308	Mus_musculus
ENSPFOG00000002008	-	71	54.433	MGP_PahariEiJ_G0029547	Fancm	91	44.712	Mus_pahari
ENSPFOG00000002008	-	75	60.000	MGP_SPRETEiJ_G0018636	Fancm	70	53.995	Mus_spretus
ENSPFOG00000002008	-	99	39.571	ENSMPUG00000004849	FANCM	92	47.596	Mustela_putorius_furo
ENSPFOG00000002008	-	99	39.705	ENSMLUG00000006671	FANCM	82	40.092	Myotis_lucifugus
ENSPFOG00000002008	-	99	38.568	ENSNGAG00000017199	Fancm	82	39.237	Nannospalax_galili
ENSPFOG00000002008	-	99	41.085	ENSNLEG00000004432	FANCM	81	41.706	Nomascus_leucogenys
ENSPFOG00000002008	-	85	82.222	ENSONIG00000003531	-	87	80.707	Oreochromis_niloticus
ENSPFOG00000002008	-	80	59.479	ENSOANG00000013997	FANCM	77	59.479	Ornithorhynchus_anatinus
ENSPFOG00000002008	-	99	39.990	ENSOCUG00000007539	FANCM	81	41.469	Oryctolagus_cuniculus
ENSPFOG00000002008	-	85	80.417	ENSORLG00000014503	-	85	80.417	Oryzias_latipes
ENSPFOG00000002008	-	86	80.694	ENSORLG00020013516	-	85	80.694	Oryzias_latipes_hni
ENSPFOG00000002008	-	85	80.556	ENSORLG00015012100	-	85	80.556	Oryzias_latipes_hsok
ENSPFOG00000002008	-	86	80.250	ENSOMEG00000010717	-	89	80.417	Oryzias_melastigma
ENSPFOG00000002008	-	82	61.657	ENSOGAG00000003015	FANCM	75	61.517	Otolemur_garnettii
ENSPFOG00000002008	-	93	43.542	ENSOARG00000009429	FANCM	93	43.805	Ovis_aries
ENSPFOG00000002008	-	99	40.719	ENSPPAG00000028944	FANCM	81	42.177	Pan_paniscus
ENSPFOG00000002008	-	99	41.136	ENSPTRG00000006307	FANCM	81	42.058	Pan_troglodytes
ENSPFOG00000002008	-	99	40.905	ENSPANG00000023200	FANCM	81	41.849	Papio_anubis
ENSPFOG00000002008	-	71	57.931	ENSPEMG00000005619	Fancm	66	57.895	Peromyscus_maniculatus_bairdii
ENSPFOG00000002008	-	83	100.000	ENSPLAG00000014164	-	94	98.901	Poecilia_latipinna
ENSPFOG00000002008	-	85	99.567	ENSPMEG00000010746	-	95	97.802	Poecilia_mexicana
ENSPFOG00000002008	-	87	96.667	ENSPREG00000019849	-	94	96.667	Poecilia_reticulata
ENSPFOG00000002008	-	93	45.469	ENSPPYG00000005781	FANCM	75	45.192	Pongo_abelii
ENSPFOG00000002008	-	67	78.351	ENSPCOG00000014388	FANCM	52	78.351	Propithecus_coquereli
ENSPFOG00000002008	-	81	59.727	ENSPNAG00000013558	-	76	59.603	Pygocentrus_nattereri
ENSPFOG00000002008	-	93	53.178	ENSRNOG00000056721	Fancm	93	45.161	Rattus_norvegicus
ENSPFOG00000002008	-	99	40.620	ENSRBIG00000011451	FANCM	81	41.588	Rhinopithecus_bieti
ENSPFOG00000002008	-	99	40.843	ENSRROG00000028917	FANCM	81	41.731	Rhinopithecus_roxellana
ENSPFOG00000002008	-	99	40.480	ENSSBOG00000030882	FANCM	77	59.448	Saimiri_boliviensis_boliviensis
ENSPFOG00000002008	-	72	54.332	ENSSHAG00000000507	FANCM	69	54.208	Sarcophilus_harrisii
ENSPFOG00000002008	-	86	77.763	ENSSMAG00000019903	-	86	77.763	Scophthalmus_maximus
ENSPFOG00000002008	-	55	81.361	ENSSDUG00000016682	-	91	85.430	Seriola_dumerili
ENSPFOG00000002008	-	83	81.361	ENSSLDG00000003408	-	79	81.361	Seriola_lalandi_dorsalis
ENSPFOG00000002008	-	74	60.631	ENSSARG00000002618	FANCM	72	60.631	Sorex_araneus
ENSPFOG00000002008	-	67	60.082	ENSSSCG00000005000	FANCM	73	45.161	Sus_scrofa
ENSPFOG00000002008	-	84	79.109	ENSTNIG00000017277	-	89	74.737	Tetraodon_nigroviridis
ENSPFOG00000002008	-	90	48.031	ENSTTRG00000006669	FANCM	72	47.736	Tursiops_truncatus
ENSPFOG00000002008	-	62	70.290	ENSVPAG00000005763	FANCM	53	60.114	Vicugna_pacos
ENSPFOG00000002008	-	88	48.444	ENSVVUG00000000357	FANCM	59	48.633	Vulpes_vulpes
ENSPFOG00000002008	-	88	90.278	ENSXMAG00000007702	-	91	90.278	Xiphophorus_maculatus