EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPFOG00000002682 (Gene tree)
Gene ID
103153373
Gene Symbol
pabpc4
Alias
-
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Poecilia_formosa
Status
putative
Strand
Minus strand
Length
10931 bases
Position
chrKI519618.1:366945-377875
Accession
103153373
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPFOP00000002693PABPPF00658.185.3e-3111
ENSPFOP00000002693RRM_5PF13893.61.4e-0911
ENSPFOP00000002693RRM_1PF00076.221.4e-9014
ENSPFOP00000002693RRM_1PF00076.221.4e-9024
ENSPFOP00000002693RRM_1PF00076.221.4e-9034
ENSPFOP00000002693RRM_1PF00076.221.4e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPFOT00000002697-2631-ENSPFOP00000002693626 (aa)XP_007574344A0A087XA90
Gene Model
Click here to download ENSPFOG00000002682's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000002682's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPFOG00000002682pabpc46532.000ENSPFOG00000015300rbm196332.000
ENSPFOG00000002682pabpc49875.975ENSPFOG00000010815pabpc1a9875.312
ENSPFOG00000002682pabpc45731.447ENSPFOG00000008100trnau1apa7031.056
ENSPFOG00000002682pabpc49876.153ENSPFOG00000005917pabpc1b9976.312
ENSPFOG00000002682pabpc46036.145ENSPFOG00000003436ELAVL27936.145
ENSPFOG00000002682pabpc45930.168ENSPFOG00000003938trnau1apb7430.168
ENSPFOG00000002682pabpc46034.940ENSPFOG00000004811elavl48734.940
ENSPFOG00000002682pabpc46438.636ENSPFOG00000016467si:dkey-205h23.28735.616
ENSPFOG00000002682pabpc45832.450ENSPFOG00000009739ELAVL19131.148
ENSPFOG00000002682pabpc45936.145ENSPFOG00000007754elavl39236.145
ENSPFOG00000002682pabpc49869.032ENSPFOG00000013241pabpc1l10065.679
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPFOG00000002682pabpc410085.008ENSG00000090621PABPC410094.574Homo_sapiens
ENSPFOG00000002682pabpc410096.006ENSAPOG00000001161pabpc49996.006Acanthochromis_polyacanthus
ENSPFOG00000002682pabpc49849.438ENSAMEG00000015083-9948.475Ailuropoda_melanoleuca
ENSPFOG00000002682pabpc410079.790ENSAMEG00000011535-10079.192Ailuropoda_melanoleuca
ENSPFOG00000002682pabpc410095.087ENSACIG00000023343pabpc49995.087Amphilophus_citrinellus
ENSPFOG00000002682pabpc49996.117ENSAOCG00000021529pabpc49995.847Amphiprion_ocellaris
ENSPFOG00000002682pabpc49996.117ENSAPEG00000019196pabpc49995.847Amphiprion_percula
ENSPFOG00000002682pabpc49995.315ENSATEG00000007402pabpc49994.896Anabas_testudineus
ENSPFOG00000002682pabpc49985.512ENSAPLG00000009729-10084.252Anas_platyrhynchos
ENSPFOG00000002682pabpc49885.106ENSACAG00000002544PABPC410083.688Anolis_carolinensis
ENSPFOG00000002682pabpc410082.764ENSANAG00000025079PABPC410082.629Aotus_nancymaae
ENSPFOG00000002682pabpc410095.847ENSACLG00000019558pabpc49995.847Astatotilapia_calliptera
ENSPFOG00000002682pabpc49986.054ENSAMXG00000018779pabpc49985.420Astyanax_mexicanus
ENSPFOG00000002682pabpc410081.555ENSBTAG00000017125PABPC410080.887Bos_taurus
ENSPFOG00000002682pabpc45883.832ENSBTAG00000048536-9383.832Bos_taurus
ENSPFOG00000002682pabpc410082.764ENSCJAG00000002512-10082.473Callithrix_jacchus
ENSPFOG00000002682pabpc47974.219ENSCJAG00000045953-9772.656Callithrix_jacchus
ENSPFOG00000002682pabpc410084.038ENSCAFG00000003081PABPC410082.942Canis_familiaris
ENSPFOG00000002682pabpc410079.940ENSCAFG00020004161PABPC410079.341Canis_lupus_dingo
ENSPFOG00000002682pabpc410079.790ENSCHIG00000019398-10079.042Capra_hircus
ENSPFOG00000002682pabpc410065.224ENSCHIG00000023385-10064.297Capra_hircus
ENSPFOG00000002682pabpc410083.725ENSTSYG00000006532PABPC410082.629Carlito_syrichta
ENSPFOG00000002682pabpc49983.200ENSCAPG00000015984PABPC410082.109Cavia_aperea
ENSPFOG00000002682pabpc410083.413ENSCPOG00000009552PABPC410082.786Cavia_porcellus
ENSPFOG00000002682pabpc410082.764ENSCCAG00000037306PABPC410082.786Cebus_capucinus
ENSPFOG00000002682pabpc410082.919ENSCATG00000042164PABPC410082.786Cercocebus_atys
ENSPFOG00000002682pabpc410083.075ENSCLAG00000011899PABPC410082.786Chinchilla_lanigera
ENSPFOG00000002682pabpc410079.940ENSCSAG00000001135PABPC410079.192Chlorocebus_sabaeus
ENSPFOG00000002682pabpc48789.211ENSCHOG00000005327PABPC47989.757Choloepus_hoffmanni
ENSPFOG00000002682pabpc49986.142ENSCPBG00000001038PABPC410084.882Chrysemys_picta_bellii
ENSPFOG00000002682pabpc49983.150ENSCANG00000034177PABPC410083.016Colobus_angolensis_palliatus
ENSPFOG00000002682pabpc49885.041ENSCGRG00001018166Pabpc410083.599Cricetulus_griseus_chok1gshd
ENSPFOG00000002682pabpc49785.314ENSCGRG00000009777Pabpc410083.845Cricetulus_griseus_crigri
ENSPFOG00000002682pabpc410094.737ENSCSEG00000000130pabpc410094.737Cynoglossus_semilaevis
ENSPFOG00000002682pabpc49998.377ENSCVAG00000019246pabpc410098.377Cyprinodon_variegatus
ENSPFOG00000002682pabpc49892.026ENSDARG00000059259pabpc410091.736Danio_rerio
ENSPFOG00000002682pabpc49981.850ENSDNOG00000018444-10081.690Dasypus_novemcinctus
ENSPFOG00000002682pabpc410081.985ENSDORG00000011581Pabpc410081.011Dipodomys_ordii
ENSPFOG00000002682pabpc48554.679ENSETEG00000009172-9952.973Echinops_telfairi
ENSPFOG00000002682pabpc410090.625ENSETEG00000018453-8490.625Echinops_telfairi
ENSPFOG00000002682pabpc49976.555ENSEBUG00000000992pabpc49975.917Eptatretus_burgeri
ENSPFOG00000002682pabpc49777.724ENSEBUG00000013782pabpc49976.911Eptatretus_burgeri
ENSPFOG00000002682pabpc410079.940ENSEASG00005014119PABPC410079.192Equus_asinus_asinus
ENSPFOG00000002682pabpc410079.940ENSECAG00000009396PABPC410079.192Equus_caballus
ENSPFOG00000002682pabpc49778.528ENSEEUG00000002962PABPC410077.545Erinaceus_europaeus
ENSPFOG00000002682pabpc49892.357ENSELUG00000003195pabpc410091.706Esox_lucius
ENSPFOG00000002682pabpc410084.038ENSFCAG00000015254-10082.942Felis_catus
ENSPFOG00000002682pabpc49985.669ENSFALG00000000543PABPC410084.409Ficedula_albicollis
ENSPFOG00000002682pabpc410080.090ENSFDAG00000020016-10079.042Fukomys_damarensis
ENSPFOG00000002682pabpc48952.830ENSFDAG00000010581-10050.512Fukomys_damarensis
ENSPFOG00000002682pabpc410098.722ENSFHEG00000007548pabpc410098.722Fundulus_heteroclitus
ENSPFOG00000002682pabpc410090.581ENSGMOG00000019025pabpc49990.581Gadus_morhua
ENSPFOG00000002682pabpc49986.299ENSGALG00000003800PABPC410085.039Gallus_gallus
ENSPFOG00000002682pabpc410097.615ENSGAFG00000018195pabpc410097.615Gambusia_affinis
ENSPFOG00000002682pabpc410092.812ENSGACG00000007179pabpc49992.812Gasterosteus_aculeatus
ENSPFOG00000002682pabpc49986.299ENSGAGG00000001888PABPC410085.039Gopherus_agassizii
ENSPFOG00000002682pabpc410082.764ENSGGOG00000004002PABPC410082.629Gorilla_gorilla
ENSPFOG00000002682pabpc410095.687ENSHBUG00000020206pabpc49995.687Haplochromis_burtoni
ENSPFOG00000002682pabpc410083.075ENSHGLG00000011162PABPC410082.629Heterocephalus_glaber_female
ENSPFOG00000002682pabpc410083.075ENSHGLG00100001580PABPC410082.629Heterocephalus_glaber_male
ENSPFOG00000002682pabpc410093.770ENSHCOG00000012694pabpc49994.728Hippocampus_comes
ENSPFOG00000002682pabpc49791.452ENSIPUG00000016620pabpc410090.536Ictalurus_punctatus
ENSPFOG00000002682pabpc410085.008ENSSTOG00000010416PABPC410083.892Ictidomys_tridecemlineatus
ENSPFOG00000002682pabpc410080.581ENSJJAG00000007781Pabpc410079.786Jaculus_jaculus
ENSPFOG00000002682pabpc410095.056ENSKMAG00000013597pabpc410095.056Kryptolebias_marmoratus
ENSPFOG00000002682pabpc410094.286ENSLBEG00000013654pabpc410094.286Labrus_bergylta
ENSPFOG00000002682pabpc49986.950ENSLACG00000011907PABPC410086.299Latimeria_chalumnae
ENSPFOG00000002682pabpc49991.181ENSLOCG00000001877pabpc410091.181Lepisosteus_oculatus
ENSPFOG00000002682pabpc410085.167ENSLAFG00000000151PABPC410084.051Loxodonta_africana
ENSPFOG00000002682pabpc410082.919ENSMFAG00000041481PABPC410082.786Macaca_fascicularis
ENSPFOG00000002682pabpc410079.940ENSMMUG00000007497PABPC410079.192Macaca_mulatta
ENSPFOG00000002682pabpc410082.919ENSMNEG00000043054PABPC410082.786Macaca_nemestrina
ENSPFOG00000002682pabpc410082.919ENSMLEG00000040716PABPC410082.786Mandrillus_leucophaeus
ENSPFOG00000002682pabpc49995.793ENSMAMG00000010025pabpc49995.048Mastacembelus_armatus
ENSPFOG00000002682pabpc410095.687ENSMZEG00005006141pabpc49995.687Maylandia_zebra
ENSPFOG00000002682pabpc49882.770ENSMGAG00000005408PABPC410081.419Meleagris_gallopavo
ENSPFOG00000002682pabpc47790.625ENSMAUG00000019763-8488.679Mesocricetus_auratus
ENSPFOG00000002682pabpc45879.532ENSMAUG00000004089-9279.532Mesocricetus_auratus
ENSPFOG00000002682pabpc47279.524ENSMAUG00000001295-9778.571Mesocricetus_auratus
ENSPFOG00000002682pabpc48884.685ENSMICG00000016633-10083.784Microcebus_murinus
ENSPFOG00000002682pabpc49975.313ENSMICG00000036729-10073.882Microcebus_murinus
ENSPFOG00000002682pabpc49884.168ENSMOCG00000006763Pabpc49982.316Microtus_ochrogaster
ENSPFOG00000002682pabpc410091.374ENSMMOG00000002363pabpc49990.895Mola_mola
ENSPFOG00000002682pabpc46071.467ENSMODG00000018051-9671.467Monodelphis_domestica
ENSPFOG00000002682pabpc49783.513ENSMODG00000017657-10081.694Monodelphis_domestica
ENSPFOG00000002682pabpc49995.484ENSMALG00000011017pabpc49994.268Monopterus_albus
ENSPFOG00000002682pabpc410079.641MGP_CAROLIEiJ_G0026435-10095.745Mus_caroli
ENSPFOG00000002682pabpc49972.902MGP_CAROLIEiJ_G0024864-10072.920Mus_caroli
ENSPFOG00000002682pabpc410085.008ENSMUSG00000011257Pabpc410094.048Mus_musculus
ENSPFOG00000002682pabpc49980.121MGP_PahariEiJ_G0028765Pabpc410096.454Mus_pahari
ENSPFOG00000002682pabpc49970.588MGP_SPRETEiJ_G0027415Pabpc410096.454Mus_spretus
ENSPFOG00000002682pabpc49546.293ENSMPUG00000006836-10045.545Mustela_putorius_furo
ENSPFOG00000002682pabpc410079.940ENSMPUG00000014414-10079.341Mustela_putorius_furo
ENSPFOG00000002682pabpc410085.008ENSMLUG00000012068PABPC410084.051Myotis_lucifugus
ENSPFOG00000002682pabpc410085.167ENSNGAG00000018292Pabpc410084.051Nannospalax_galili
ENSPFOG00000002682pabpc46598.795ENSNBRG00000010047-7298.795Neolamprologus_brichardi
ENSPFOG00000002682pabpc46098.077ENSNBRG00000009708pabpc49898.077Neolamprologus_brichardi
ENSPFOG00000002682pabpc410082.919ENSNLEG00000011928PABPC410082.786Nomascus_leucogenys
ENSPFOG00000002682pabpc48593.651ENSOPRG00000011984PABPC48693.651Ochotona_princeps
ENSPFOG00000002682pabpc410082.919ENSODEG00000006592-10082.160Octodon_degus
ENSPFOG00000002682pabpc45382.143ENSODEG00000013457-10082.143Octodon_degus
ENSPFOG00000002682pabpc49974.066ENSODEG00000017434-10072.407Octodon_degus
ENSPFOG00000002682pabpc410095.847ENSONIG00000008176pabpc49995.847Oreochromis_niloticus
ENSPFOG00000002682pabpc49986.299ENSOANG00000010001PABPC410085.197Ornithorhynchus_anatinus
ENSPFOG00000002682pabpc49580.220ENSOCUG00000000562PABPC48879.435Oryctolagus_cuniculus
ENSPFOG00000002682pabpc49997.531ENSORLG00000017479pabpc49997.531Oryzias_latipes
ENSPFOG00000002682pabpc49997.531ENSORLG00020018644pabpc49997.531Oryzias_latipes_hni
ENSPFOG00000002682pabpc49997.531ENSORLG00015015042pabpc49997.531Oryzias_latipes_hsok
ENSPFOG00000002682pabpc49995.793ENSOMEG00000014410pabpc49995.048Oryzias_melastigma
ENSPFOG00000002682pabpc410081.402ENSOGAG00000004067PABPC410080.793Otolemur_garnettii
ENSPFOG00000002682pabpc410079.790ENSOARG00000020060PABPC410079.042Ovis_aries
ENSPFOG00000002682pabpc410082.764ENSPPAG00000043625PABPC410082.629Pan_paniscus
ENSPFOG00000002682pabpc410084.038ENSPPRG00000024727PABPC410082.942Panthera_pardus
ENSPFOG00000002682pabpc410084.038ENSPTIG00000005829PABPC410082.942Panthera_tigris_altaica
ENSPFOG00000002682pabpc410082.764ENSPTRG00000000573PABPC410082.629Pan_troglodytes
ENSPFOG00000002682pabpc410082.919ENSPANG00000009484PABPC410082.786Papio_anubis
ENSPFOG00000002682pabpc49990.079ENSPKIG00000025356pabpc49990.079Paramormyrops_kingsleyae
ENSPFOG00000002682pabpc49986.614ENSPSIG00000016892PABPC410085.354Pelodiscus_sinensis
ENSPFOG00000002682pabpc410090.735ENSPMGG00000009073pabpc49989.936Periophthalmus_magnuspinnatus
ENSPFOG00000002682pabpc410082.298ENSPEMG00000023569-10082.316Peromyscus_maniculatus_bairdii
ENSPFOG00000002682pabpc410079.938ENSPEMG00000024193-10079.160Peromyscus_maniculatus_bairdii
ENSPFOG00000002682pabpc48874.913ENSPMAG00000002836pabpc410075.784Petromyzon_marinus
ENSPFOG00000002682pabpc49674.580ENSPMAG00000007885pabpc410072.912Petromyzon_marinus
ENSPFOG00000002682pabpc49787.480ENSPCIG00000020674PABPC49995.146Phascolarctos_cinereus
ENSPFOG00000002682pabpc410099.840ENSPLAG00000010112pabpc410099.840Poecilia_latipinna
ENSPFOG00000002682pabpc410099.681ENSPMEG00000019739pabpc410099.681Poecilia_mexicana
ENSPFOG00000002682pabpc410099.042ENSPREG00000001589pabpc410099.042Poecilia_reticulata
ENSPFOG00000002682pabpc410079.790ENSPPYG00000001506PABPC410079.042Pongo_abelii
ENSPFOG00000002682pabpc410075.150ENSPCAG00000003341PABPC410074.401Procavia_capensis
ENSPFOG00000002682pabpc49968.596ENSPCOG00000025882-9582.692Propithecus_coquereli
ENSPFOG00000002682pabpc410082.791ENSPCOG00000023725-10082.656Propithecus_coquereli
ENSPFOG00000002682pabpc49879.104ENSPVAG00000002187PABPC410077.944Pteropus_vampyrus
ENSPFOG00000002682pabpc410095.847ENSPNYG00000006134pabpc49995.847Pundamilia_nyererei
ENSPFOG00000002682pabpc49992.868ENSPNAG00000024355pabpc410092.868Pygocentrus_nattereri
ENSPFOG00000002682pabpc410079.695ENSRNOG00000028592AABR07035074.110078.714Rattus_norvegicus
ENSPFOG00000002682pabpc410081.832ENSRNOG00000015642Pabpc410080.858Rattus_norvegicus
ENSPFOG00000002682pabpc410082.919ENSRBIG00000039761PABPC410082.786Rhinopithecus_bieti
ENSPFOG00000002682pabpc410082.919ENSRROG00000033355PABPC410082.786Rhinopithecus_roxellana
ENSPFOG00000002682pabpc410082.764ENSSBOG00000026193PABPC410082.786Saimiri_boliviensis_boliviensis
ENSPFOG00000002682pabpc49787.319ENSSHAG00000018139PABPC410085.354Sarcophilus_harrisii
ENSPFOG00000002682pabpc49990.033ENSSFOG00015023514pabpc410090.033Scleropages_formosus
ENSPFOG00000002682pabpc410094.577ENSSMAG00000009007pabpc410094.577Scophthalmus_maximus
ENSPFOG00000002682pabpc49995.793ENSSDUG00000012683pabpc49995.208Seriola_dumerili
ENSPFOG00000002682pabpc49995.793ENSSLDG00000013025pabpc49995.208Seriola_lalandi_dorsalis
ENSPFOG00000002682pabpc410073.653ENSSARG00000000310PABPC410072.754Sorex_araneus
ENSPFOG00000002682pabpc49986.804ENSSPUG00000003204PABPC410085.533Sphenodon_punctatus
ENSPFOG00000002682pabpc49995.793ENSSPAG00000009252pabpc49995.367Stegastes_partitus
ENSPFOG00000002682pabpc48843.915ENSSSCG00000036170-9644.092Sus_scrofa
ENSPFOG00000002682pabpc410082.919ENSSSCG00000003660-10082.786Sus_scrofa
ENSPFOG00000002682pabpc49981.381ENSTGUG00000001266PABPC410081.053Taeniopygia_guttata
ENSPFOG00000002682pabpc410093.610ENSTRUG00000005907pabpc49993.610Takifugu_rubripes
ENSPFOG00000002682pabpc410086.581ENSTNIG00000016902pabpc49986.262Tetraodon_nigroviridis
ENSPFOG00000002682pabpc49968.988ENSTBEG00000009035PABPC410067.993Tupaia_belangeri
ENSPFOG00000002682pabpc49959.649ENSTTRG00000014340PABPC410067.330Tursiops_truncatus
ENSPFOG00000002682pabpc410084.038ENSUAMG00000000303PABPC410082.942Ursus_americanus
ENSPFOG00000002682pabpc410087.330ENSUMAG00000019585PABPC410090.115Ursus_maritimus
ENSPFOG00000002682pabpc47870.206ENSVPAG00000010041PABPC47270.206Vicugna_pacos
ENSPFOG00000002682pabpc410084.038ENSVVUG00000005215PABPC410082.942Vulpes_vulpes
ENSPFOG00000002682pabpc46895.833ENSXETG00000027221-10095.833Xenopus_tropicalis
ENSPFOG00000002682pabpc49982.520ENSXETG00000010946pabpc410081.260Xenopus_tropicalis
ENSPFOG00000002682pabpc49995.782ENSXCOG00000013190pabpc49698.585Xiphophorus_couchianus
ENSPFOG00000002682pabpc410099.201ENSXMAG00000019007pabpc410099.201Xiphophorus_maculatus

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