EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000002839 (Gene tree)
Gene ID: 103155948
Gene Symbol: nop53
Alias: -
Full Name: NOP53 ribosome biogenesis factor
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 6721 bases
Position: chrKI520067.1:147494-154214
Accession: 103155948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000002908	Nop53	PF07767.11	1.6e-96	1	1
ENSPFOP00000023367	Nop53	PF07767.11	1.2e-75	1	2
ENSPFOP00000023367	Nop53	PF07767.11	1.2e-75	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000024707	-	1477	-	ENSPFOP00000023367	480 (aa)	-	A0A096LW26
ENSPFOT00000002912	-	1441	XM_007577841	ENSPFOP00000002908	468 (aa)	XP_007577903	A0A087XAV5

Gene Model

Click here to download ENSPFOG00000002839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000002839's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000002839	nop53	89	49.415	ENSG00000105373	NOP53	90	75.904	Homo_sapiens
ENSPFOG00000002839	nop53	100	78.846	ENSAPOG00000006446	nop53	100	79.701	Acanthochromis_polyacanthus
ENSPFOG00000002839	nop53	89	46.050	ENSAMEG00000015214	NOP53	88	45.598	Ailuropoda_melanoleuca
ENSPFOG00000002839	nop53	74	73.775	ENSACIG00000002467	nop53	99	73.775	Amphilophus_citrinellus
ENSPFOG00000002839	nop53	100	78.846	ENSAOCG00000007002	nop53	100	79.060	Amphiprion_ocellaris
ENSPFOG00000002839	nop53	100	79.274	ENSAPEG00000024564	nop53	100	79.487	Amphiprion_percula
ENSPFOG00000002839	nop53	96	76.615	ENSATEG00000021860	nop53	100	76.392	Anabas_testudineus
ENSPFOG00000002839	nop53	57	56.000	ENSACAG00000011362	-	93	56.000	Anolis_carolinensis
ENSPFOG00000002839	nop53	97	43.384	ENSANAG00000007933	NOP53	92	44.869	Aotus_nancymaae
ENSPFOG00000002839	nop53	100	76.709	ENSACLG00000011832	nop53	100	76.068	Astatotilapia_calliptera
ENSPFOG00000002839	nop53	97	61.688	ENSAMXG00000014883	nop53	99	62.420	Astyanax_mexicanus
ENSPFOG00000002839	nop53	89	48.499	ENSBTAG00000021192	NOP53	79	48.268	Bos_taurus
ENSPFOG00000002839	nop53	89	48.174	ENSCJAG00000011385	NOP53	88	48.956	Callithrix_jacchus
ENSPFOG00000002839	nop53	97	47.257	ENSCAFG00000004080	NOP53	88	48.848	Canis_familiaris
ENSPFOG00000002839	nop53	89	48.718	ENSCHIG00000009393	NOP53	88	48.485	Capra_hircus
ENSPFOG00000002839	nop53	89	43.692	ENSTSYG00000036631	NOP53	86	44.138	Carlito_syrichta
ENSPFOG00000002839	nop53	84	48.395	ENSCAPG00000013148	NOP53	99	48.395	Cavia_aperea
ENSPFOG00000002839	nop53	89	49.417	ENSCPOG00000015665	NOP53	88	49.417	Cavia_porcellus
ENSPFOG00000002839	nop53	89	49.415	ENSCCAG00000025477	NOP53	87	49.415	Cebus_capucinus
ENSPFOG00000002839	nop53	89	48.946	ENSCATG00000032842	NOP53	87	48.946	Cercocebus_atys
ENSPFOG00000002839	nop53	99	45.773	ENSCLAG00000001860	NOP53	88	48.028	Chinchilla_lanigera
ENSPFOG00000002839	nop53	89	48.946	ENSCSAG00000002928	NOP53	87	48.946	Chlorocebus_sabaeus
ENSPFOG00000002839	nop53	85	50.365	ENSCPBG00000009047	NOP53	94	50.243	Chrysemys_picta_bellii
ENSPFOG00000002839	nop53	89	32.333	ENSCING00000021395	-	96	32.569	Ciona_intestinalis
ENSPFOG00000002839	nop53	89	32.874	ENSCSAVG00000006009	-	95	33.333	Ciona_savignyi
ENSPFOG00000002839	nop53	89	47.630	ENSCANG00000039648	NOP53	86	47.393	Colobus_angolensis_palliatus
ENSPFOG00000002839	nop53	89	48.492	ENSCGRG00001019033	Nop53	88	48.492	Cricetulus_griseus_chok1gshd
ENSPFOG00000002839	nop53	99	66.161	ENSCSEG00000014834	nop53	98	66.594	Cynoglossus_semilaevis
ENSPFOG00000002839	nop53	100	86.966	ENSCVAG00000005940	nop53	100	86.966	Cyprinodon_variegatus
ENSPFOG00000002839	nop53	99	62.420	ENSDARG00000100452	nop53	99	62.420	Danio_rerio
ENSPFOG00000002839	nop53	89	49.074	ENSDNOG00000005165	NOP53	79	48.843	Dasypus_novemcinctus
ENSPFOG00000002839	nop53	93	43.468	ENSEBUG00000012747	nop53	90	42.791	Eptatretus_burgeri
ENSPFOG00000002839	nop53	97	46.695	ENSEASG00005004345	NOP53	84	48.506	Equus_asinus_asinus
ENSPFOG00000002839	nop53	99	44.421	ENSECAG00000026850	NOP53	84	47.955	Equus_caballus
ENSPFOG00000002839	nop53	86	81.250	ENSEEUG00000005287	NOP53	73	81.250	Erinaceus_europaeus
ENSPFOG00000002839	nop53	100	65.171	ENSELUG00000001525	nop53	100	65.171	Esox_lucius
ENSPFOG00000002839	nop53	89	48.157	ENSFCAG00000010861	NOP53	88	47.696	Felis_catus
ENSPFOG00000002839	nop53	89	44.186	ENSFDAG00000010478	NOP53	72	68.675	Fukomys_damarensis
ENSPFOG00000002839	nop53	100	87.179	ENSFHEG00000017763	nop53	97	87.179	Fundulus_heteroclitus
ENSPFOG00000002839	nop53	100	61.996	ENSGMOG00000014299	nop53	100	61.996	Gadus_morhua
ENSPFOG00000002839	nop53	97	46.058	ENSGALG00000039473	NOP53	70	48.753	Gallus_gallus
ENSPFOG00000002839	nop53	99	93.362	ENSGAFG00000013301	nop53	98	93.148	Gambusia_affinis
ENSPFOG00000002839	nop53	100	67.308	ENSGACG00000005766	nop53	100	67.735	Gasterosteus_aculeatus
ENSPFOG00000002839	nop53	89	44.676	ENSGGOG00000024728	-	87	45.221	Gorilla_gorilla
ENSPFOG00000002839	nop53	89	47.307	ENSGGOG00000005462	NOP53	87	47.307	Gorilla_gorilla
ENSPFOG00000002839	nop53	100	76.923	ENSHBUG00000023625	nop53	100	76.282	Haplochromis_burtoni
ENSPFOG00000002839	nop53	89	48.605	ENSHGLG00000018240	NOP53	88	48.605	Heterocephalus_glaber_female
ENSPFOG00000002839	nop53	66	63.717	ENSHGLG00100015613	NOP53	83	63.248	Heterocephalus_glaber_male
ENSPFOG00000002839	nop53	100	69.734	ENSHCOG00000017133	nop53	100	71.369	Hippocampus_comes
ENSPFOG00000002839	nop53	99	62.128	ENSIPUG00000008154	nop53	88	63.113	Ictalurus_punctatus
ENSPFOG00000002839	nop53	89	49.180	ENSSTOG00000022092	NOP53	87	49.180	Ictidomys_tridecemlineatus
ENSPFOG00000002839	nop53	89	46.977	ENSJJAG00000007854	Nop53	88	49.070	Jaculus_jaculus
ENSPFOG00000002839	nop53	96	82.222	ENSKMAG00000020756	nop53	100	82.000	Kryptolebias_marmoratus
ENSPFOG00000002839	nop53	100	73.932	ENSLBEG00000011432	nop53	100	74.359	Labrus_bergylta
ENSPFOG00000002839	nop53	85	53.186	ENSLACG00000018320	NOP53	99	53.186	Latimeria_chalumnae
ENSPFOG00000002839	nop53	100	58.761	ENSLOCG00000014178	nop53	100	59.915	Lepisosteus_oculatus
ENSPFOG00000002839	nop53	89	48.946	ENSMFAG00000045103	NOP53	87	48.946	Macaca_fascicularis
ENSPFOG00000002839	nop53	89	49.180	ENSMMUG00000013348	NOP53	99	66.019	Macaca_mulatta
ENSPFOG00000002839	nop53	89	49.180	ENSMNEG00000042540	NOP53	84	49.180	Macaca_nemestrina
ENSPFOG00000002839	nop53	89	43.160	ENSMLEG00000032475	NOP53	68	66.038	Mandrillus_leucophaeus
ENSPFOG00000002839	nop53	100	76.695	ENSMAMG00000012652	nop53	100	76.907	Mastacembelus_armatus
ENSPFOG00000002839	nop53	100	72.222	ENSMZEG00005005033	nop53	100	71.581	Maylandia_zebra
ENSPFOG00000002839	nop53	89	48.000	ENSMAUG00000012617	Nop53	87	48.235	Mesocricetus_auratus
ENSPFOG00000002839	nop53	91	46.413	ENSMICG00000005580	NOP53	92	47.597	Microcebus_murinus
ENSPFOG00000002839	nop53	89	48.706	ENSMOCG00000008367	Nop53	88	48.706	Microtus_ochrogaster
ENSPFOG00000002839	nop53	100	75.532	ENSMMOG00000006515	nop53	100	75.319	Mola_mola
ENSPFOG00000002839	nop53	99	47.817	ENSMODG00000008721	NOP53	92	46.138	Monodelphis_domestica
ENSPFOG00000002839	nop53	100	76.282	ENSMALG00000020350	nop53	96	77.137	Monopterus_albus
ENSPFOG00000002839	nop53	89	48.157	MGP_CAROLIEiJ_G0029218	Nop53	88	48.276	Mus_caroli
ENSPFOG00000002839	nop53	89	48.037	ENSMUSG00000041560	Nop53	88	48.037	Mus_musculus
ENSPFOG00000002839	nop53	86	46.905	MGP_PahariEiJ_G0021074	-	95	46.905	Mus_pahari
ENSPFOG00000002839	nop53	89	47.552	MGP_SPRETEiJ_G0030298	Nop53	88	47.552	Mus_spretus
ENSPFOG00000002839	nop53	97	45.781	ENSMPUG00000004456	NOP53	88	47.235	Mustela_putorius_furo
ENSPFOG00000002839	nop53	54	65.812	ENSMLUG00000027066	-	99	50.752	Myotis_lucifugus
ENSPFOG00000002839	nop53	97	46.581	ENSNGAG00000019894	Nop53	88	48.148	Nannospalax_galili
ENSPFOG00000002839	nop53	99	67.672	ENSNBRG00000002057	nop53	93	69.128	Neolamprologus_brichardi
ENSPFOG00000002839	nop53	89	39.180	ENSNLEG00000028326	-	89	40.732	Nomascus_leucogenys
ENSPFOG00000002839	nop53	89	49.415	ENSNLEG00000003143	NOP53	87	49.415	Nomascus_leucogenys
ENSPFOG00000002839	nop53	76	42.623	ENSMEUG00000002525	-	99	41.644	Notamacropus_eugenii
ENSPFOG00000002839	nop53	89	48.409	ENSODEG00000006707	NOP53	88	49.074	Octodon_degus
ENSPFOG00000002839	nop53	100	77.137	ENSONIG00000016624	nop53	100	76.923	Oreochromis_niloticus
ENSPFOG00000002839	nop53	100	71.855	ENSORLG00000008659	nop53	100	71.642	Oryzias_latipes
ENSPFOG00000002839	nop53	100	69.510	ENSORLG00020019916	nop53	97	69.296	Oryzias_latipes_hni
ENSPFOG00000002839	nop53	100	74.468	ENSORLG00015001315	nop53	100	74.468	Oryzias_latipes_hsok
ENSPFOG00000002839	nop53	97	75.435	ENSOMEG00000018244	nop53	100	75.424	Oryzias_melastigma
ENSPFOG00000002839	nop53	89	79.104	ENSOGAG00000024300	NOP53	89	43.699	Otolemur_garnettii
ENSPFOG00000002839	nop53	88	36.512	ENSOARG00000011414	NOP53	87	35.765	Ovis_aries
ENSPFOG00000002839	nop53	97	42.004	ENSPPAG00000029337	-	87	42.657	Pan_paniscus
ENSPFOG00000002839	nop53	89	47.775	ENSPPAG00000002927	-	87	47.775	Pan_paniscus
ENSPFOG00000002839	nop53	58	80.000	ENSPPAG00000032995	-	86	42.019	Pan_paniscus
ENSPFOG00000002839	nop53	89	47.696	ENSPPRG00000008954	NOP53	88	47.235	Panthera_pardus
ENSPFOG00000002839	nop53	89	49.415	ENSPTRG00000011215	NOP53	87	49.415	Pan_troglodytes
ENSPFOG00000002839	nop53	97	42.857	ENSPTRG00000052493	-	87	43.590	Pan_troglodytes
ENSPFOG00000002839	nop53	89	46.495	ENSPTRG00000043520	-	87	46.495	Pan_troglodytes
ENSPFOG00000002839	nop53	89	49.180	ENSPANG00000002964	NOP53	87	49.180	Papio_anubis
ENSPFOG00000002839	nop53	99	60.171	ENSPKIG00000000127	nop53	99	60.385	Paramormyrops_kingsleyae
ENSPFOG00000002839	nop53	100	69.427	ENSPMGG00000021579	nop53	100	69.427	Periophthalmus_magnuspinnatus
ENSPFOG00000002839	nop53	89	48.724	ENSPEMG00000006856	Nop53	88	48.492	Peromyscus_maniculatus_bairdii
ENSPFOG00000002839	nop53	50	41.176	ENSPMAG00000001501	-	88	41.176	Petromyzon_marinus
ENSPFOG00000002839	nop53	97	44.731	ENSPCIG00000016718	NOP53	88	45.455	Phascolarctos_cinereus
ENSPFOG00000002839	nop53	100	99.573	ENSPLAG00000006675	nop53	100	99.573	Poecilia_latipinna
ENSPFOG00000002839	nop53	60	99.647	ENSPLAG00000009285	-	88	99.647	Poecilia_latipinna
ENSPFOG00000002839	nop53	60	99.293	ENSPMEG00000006978	nop53	88	99.293	Poecilia_mexicana
ENSPFOG00000002839	nop53	100	98.718	ENSPMEG00000009589	nop53	100	98.718	Poecilia_mexicana
ENSPFOG00000002839	nop53	100	86.752	ENSPREG00000008711	nop53	100	86.538	Poecilia_reticulata
ENSPFOG00000002839	nop53	89	46.512	ENSPPYG00000010181	NOP53	87	46.495	Pongo_abelii
ENSPFOG00000002839	nop53	99	44.937	ENSPCAG00000007692	NOP53	89	46.572	Procavia_capensis
ENSPFOG00000002839	nop53	72	62.832	ENSPCOG00000016124	NOP53	79	64.151	Propithecus_coquereli
ENSPFOG00000002839	nop53	73	49.810	ENSPVAG00000014671	NOP53	72	49.810	Pteropus_vampyrus
ENSPFOG00000002839	nop53	100	77.137	ENSPNYG00000001341	nop53	100	76.496	Pundamilia_nyererei
ENSPFOG00000002839	nop53	99	63.326	ENSPNAG00000012520	nop53	99	62.947	Pygocentrus_nattereri
ENSPFOG00000002839	nop53	89	48.492	ENSRNOG00000013023	Nop53	88	48.492	Rattus_norvegicus
ENSPFOG00000002839	nop53	89	49.649	ENSRBIG00000036427	NOP53	87	49.649	Rhinopithecus_bieti
ENSPFOG00000002839	nop53	89	49.649	ENSRROG00000042298	NOP53	88	49.649	Rhinopithecus_roxellana
ENSPFOG00000002839	nop53	89	49.415	ENSSBOG00000033115	NOP53	87	49.415	Saimiri_boliviensis_boliviensis
ENSPFOG00000002839	nop53	85	47.101	ENSSHAG00000002239	NOP53	99	45.985	Sarcophilus_harrisii
ENSPFOG00000002839	nop53	100	64.103	ENSSFOG00015007062	gltscr2	100	63.675	Scleropages_formosus
ENSPFOG00000002839	nop53	100	73.248	ENSSMAG00000000212	nop53	100	73.673	Scophthalmus_maximus
ENSPFOG00000002839	nop53	100	77.350	ENSSDUG00000010575	nop53	100	77.778	Seriola_dumerili
ENSPFOG00000002839	nop53	100	75.000	ENSSLDG00000000140	nop53	97	75.427	Seriola_lalandi_dorsalis
ENSPFOG00000002839	nop53	72	48.276	ENSSARG00000014109	NOP53	72	48.266	Sorex_araneus
ENSPFOG00000002839	nop53	96	39.545	ENSSPUG00000004420	NOP53	83	46.457	Sphenodon_punctatus
ENSPFOG00000002839	nop53	100	78.846	ENSSPAG00000000318	nop53	100	78.419	Stegastes_partitus
ENSPFOG00000002839	nop53	89	47.281	ENSSSCG00000022774	NOP53	87	47.518	Sus_scrofa
ENSPFOG00000002839	nop53	100	73.077	ENSTRUG00000004944	nop53	100	73.077	Takifugu_rubripes
ENSPFOG00000002839	nop53	54	78.968	ENSTNIG00000014330	nop53	95	78.968	Tetraodon_nigroviridis
ENSPFOG00000002839	nop53	65	64.602	ENSTBEG00000008708	NOP53	65	63.248	Tupaia_belangeri
ENSPFOG00000002839	nop53	89	47.907	ENSTTRG00000011831	NOP53	88	47.674	Tursiops_truncatus
ENSPFOG00000002839	nop53	89	45.853	ENSUAMG00000028254	NOP53	88	46.083	Ursus_americanus
ENSPFOG00000002839	nop53	76	42.021	ENSVVUG00000023365	NOP53	66	40.541	Vulpes_vulpes
ENSPFOG00000002839	nop53	87	63.393	ENSXETG00000002782	nop53	91	48.478	Xenopus_tropicalis
ENSPFOG00000002839	nop53	100	91.667	ENSXCOG00000004436	nop53	100	91.026	Xiphophorus_couchianus
ENSPFOG00000002839	nop53	100	94.231	ENSXMAG00000002589	nop53	100	93.590	Xiphophorus_maculatus