EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000002841 (Gene tree)
Gene ID: 103156406
Gene Symbol: rnaseh1
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 13935 bases
Position: chrKI520090.1:88170-102104
Accession: 103156406
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000002783	RNase_H	PF00075.24	4.1e-43	1	1
ENSPFOP00000029277	RNase_H	PF00075.24	4.5e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000002787	-	1597	-	ENSPFOP00000002783	294 (aa)	-	A0A087XAI0
ENSPFOT00000022015	-	1289	-	ENSPFOP00000029277	295 (aa)	XP_016519835	A0A096MCY6

Gene Model

Click here to download ENSPFOG00000002841's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000002841's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000002841	rnaseh1	90	56.343	ENSG00000171865	RNASEH1	90	56.343	Homo_sapiens
ENSPFOG00000002841	rnaseh1	100	69.831	ENSAPOG00000000412	rnaseh1	98	69.831	Acanthochromis_polyacanthus
ENSPFOG00000002841	rnaseh1	90	53.903	ENSAMEG00000018433	RNASEH1	89	54.307	Ailuropoda_melanoleuca
ENSPFOG00000002841	rnaseh1	100	72.881	ENSACIG00000014666	rnaseh1	97	72.881	Amphilophus_citrinellus
ENSPFOG00000002841	rnaseh1	100	71.525	ENSAOCG00000015210	rnaseh1	98	71.525	Amphiprion_ocellaris
ENSPFOG00000002841	rnaseh1	100	71.622	ENSAPEG00000014104	rnaseh1	98	71.622	Amphiprion_percula
ENSPFOG00000002841	rnaseh1	100	71.186	ENSATEG00000000598	rnaseh1	96	74.908	Anabas_testudineus
ENSPFOG00000002841	rnaseh1	86	55.426	ENSAPLG00000001961	RNASEH1	100	55.426	Anas_platyrhynchos
ENSPFOG00000002841	rnaseh1	91	48.667	ENSACAG00000016857	rnaseh1	93	48.667	Anolis_carolinensis
ENSPFOG00000002841	rnaseh1	90	57.090	ENSANAG00000024055	RNASEH1	90	57.090	Aotus_nancymaae
ENSPFOG00000002841	rnaseh1	100	72.667	ENSACLG00000006741	rnaseh1	97	73.000	Astatotilapia_calliptera
ENSPFOG00000002841	rnaseh1	99	50.172	ENSAMXG00000042940	rnaseh1	97	55.839	Astyanax_mexicanus
ENSPFOG00000002841	rnaseh1	91	56.716	ENSBTAG00000016235	RNASEH1	91	56.716	Bos_taurus
ENSPFOG00000002841	rnaseh1	89	35.878	WBGene00004382	rnh-1.0	95	35.878	Caenorhabditis_elegans
ENSPFOG00000002841	rnaseh1	90	55.556	ENSCJAG00000035450	RNASEH1	90	55.556	Callithrix_jacchus
ENSPFOG00000002841	rnaseh1	98	51.361	ENSCAFG00000003259	RNASEH1	98	51.361	Canis_familiaris
ENSPFOG00000002841	rnaseh1	51	66.443	ENSCAFG00020004994	RNASEH1	97	65.563	Canis_lupus_dingo
ENSPFOG00000002841	rnaseh1	91	57.249	ENSCHIG00000022264	-	93	54.676	Capra_hircus
ENSPFOG00000002841	rnaseh1	83	46.559	ENSCHIG00000022230	-	99	46.559	Capra_hircus
ENSPFOG00000002841	rnaseh1	90	53.285	ENSTSYG00000012926	RNASEH1	89	53.285	Carlito_syrichta
ENSPFOG00000002841	rnaseh1	83	57.317	ENSCAPG00000004813	RNASEH1	97	57.317	Cavia_aperea
ENSPFOG00000002841	rnaseh1	91	56.134	ENSCPOG00000022278	Rnaseh1	87	56.134	Cavia_porcellus
ENSPFOG00000002841	rnaseh1	90	56.364	ENSCCAG00000038017	RNASEH1	90	56.364	Cebus_capucinus
ENSPFOG00000002841	rnaseh1	90	49.811	ENSCATG00000016818	-	89	49.811	Cercocebus_atys
ENSPFOG00000002841	rnaseh1	90	54.851	ENSCATG00000016515	-	90	54.851	Cercocebus_atys
ENSPFOG00000002841	rnaseh1	89	57.519	ENSCLAG00000002440	RNASEH1	89	57.519	Chinchilla_lanigera
ENSPFOG00000002841	rnaseh1	90	56.391	ENSCSAG00000006943	RNASEH1	90	56.391	Chlorocebus_sabaeus
ENSPFOG00000002841	rnaseh1	52	68.627	ENSCHOG00000008547	RNASEH1	75	68.627	Choloepus_hoffmanni
ENSPFOG00000002841	rnaseh1	90	55.273	ENSCPBG00000021620	RNASEH1	99	55.273	Chrysemys_picta_bellii
ENSPFOG00000002841	rnaseh1	97	36.577	ENSCING00000014054	-	98	36.577	Ciona_intestinalis
ENSPFOG00000002841	rnaseh1	76	37.768	ENSCSAVG00000000009	-	96	37.768	Ciona_savignyi
ENSPFOG00000002841	rnaseh1	90	56.015	ENSCANG00000037763	RNASEH1	90	56.015	Colobus_angolensis_palliatus
ENSPFOG00000002841	rnaseh1	90	56.877	ENSCGRG00001008950	Rnaseh1	90	57.463	Cricetulus_griseus_chok1gshd
ENSPFOG00000002841	rnaseh1	90	56.877	ENSCGRG00000006029	Rnaseh1	90	57.463	Cricetulus_griseus_crigri
ENSPFOG00000002841	rnaseh1	100	63.725	ENSCSEG00000005741	rnaseh1	95	67.509	Cynoglossus_semilaevis
ENSPFOG00000002841	rnaseh1	100	81.356	ENSCVAG00000018717	rnaseh1	98	81.356	Cyprinodon_variegatus
ENSPFOG00000002841	rnaseh1	91	67.636	ENSDARG00000042571	rnaseh1	98	67.636	Danio_rerio
ENSPFOG00000002841	rnaseh1	90	54.682	ENSDNOG00000016056	RNASEH1	90	54.682	Dasypus_novemcinctus
ENSPFOG00000002841	rnaseh1	90	54.815	ENSDORG00000000704	Rnaseh1	90	54.815	Dipodomys_ordii
ENSPFOG00000002841	rnaseh1	91	38.776	FBgn0023171	rnh1	94	38.776	Drosophila_melanogaster
ENSPFOG00000002841	rnaseh1	90	52.256	ENSETEG00000012674	RNASEH1	89	52.256	Echinops_telfairi
ENSPFOG00000002841	rnaseh1	89	42.667	ENSEBUG00000008898	rnaseh1	98	42.667	Eptatretus_burgeri
ENSPFOG00000002841	rnaseh1	89	45.627	ENSEBUG00000006116	rnaseh1	78	45.627	Eptatretus_burgeri
ENSPFOG00000002841	rnaseh1	90	56.716	ENSEASG00005022200	RNASEH1	88	56.716	Equus_asinus_asinus
ENSPFOG00000002841	rnaseh1	90	56.716	ENSECAG00000020695	RNASEH1	88	56.716	Equus_caballus
ENSPFOG00000002841	rnaseh1	99	65.333	ENSELUG00000010112	rnaseh1	99	65.333	Esox_lucius
ENSPFOG00000002841	rnaseh1	89	54.924	ENSFCAG00000025832	RNASEH1	89	54.924	Felis_catus
ENSPFOG00000002841	rnaseh1	97	54.054	ENSFALG00000002069	RNASEH1	99	54.054	Ficedula_albicollis
ENSPFOG00000002841	rnaseh1	89	55.639	ENSFDAG00000002035	RNASEH1	79	55.639	Fukomys_damarensis
ENSPFOG00000002841	rnaseh1	99	65.541	ENSGMOG00000013818	rnaseh1	99	65.541	Gadus_morhua
ENSPFOG00000002841	rnaseh1	96	53.448	ENSGALG00000016389	RNASEH1	98	53.448	Gallus_gallus
ENSPFOG00000002841	rnaseh1	99	92.517	ENSGAFG00000001776	rnaseh1	99	92.517	Gambusia_affinis
ENSPFOG00000002841	rnaseh1	100	70.169	ENSGACG00000011935	rnaseh1	97	70.169	Gasterosteus_aculeatus
ENSPFOG00000002841	rnaseh1	90	56.364	ENSGAGG00000009150	RNASEH1	62	57.246	Gopherus_agassizii
ENSPFOG00000002841	rnaseh1	90	55.639	ENSGGOG00000034822	RNASEH1	90	55.639	Gorilla_gorilla
ENSPFOG00000002841	rnaseh1	100	72.000	ENSHBUG00000004666	rnaseh1	97	72.333	Haplochromis_burtoni
ENSPFOG00000002841	rnaseh1	89	55.682	ENSHGLG00000002585	Rnaseh1	82	55.682	Heterocephalus_glaber_female
ENSPFOG00000002841	rnaseh1	89	55.682	ENSHGLG00100005105	Rnaseh1	82	55.682	Heterocephalus_glaber_male
ENSPFOG00000002841	rnaseh1	100	63.245	ENSHCOG00000012329	rnaseh1	97	64.238	Hippocampus_comes
ENSPFOG00000002841	rnaseh1	100	58.725	ENSIPUG00000023060	rnaseh1	98	61.679	Ictalurus_punctatus
ENSPFOG00000002841	rnaseh1	89	56.391	ENSSTOG00000012774	RNASEH1	91	56.391	Ictidomys_tridecemlineatus
ENSPFOG00000002841	rnaseh1	81	52.917	ENSJJAG00000020238	Rnaseh1	90	52.917	Jaculus_jaculus
ENSPFOG00000002841	rnaseh1	90	50.566	ENSJJAG00000021481	-	89	50.566	Jaculus_jaculus
ENSPFOG00000002841	rnaseh1	88	44.788	ENSJJAG00000008994	-	89	44.788	Jaculus_jaculus
ENSPFOG00000002841	rnaseh1	99	73.129	ENSKMAG00000001373	rnaseh1	98	73.129	Kryptolebias_marmoratus
ENSPFOG00000002841	rnaseh1	99	66.553	ENSLBEG00000004480	rnaseh1	97	71.747	Labrus_bergylta
ENSPFOG00000002841	rnaseh1	93	55.789	ENSLACG00000007100	RNASEH1	92	55.789	Latimeria_chalumnae
ENSPFOG00000002841	rnaseh1	91	58.123	ENSLOCG00000017212	rnaseh1	98	58.484	Lepisosteus_oculatus
ENSPFOG00000002841	rnaseh1	89	56.654	ENSLAFG00000015091	RNASEH1	89	56.654	Loxodonta_africana
ENSPFOG00000002841	rnaseh1	90	56.015	ENSMFAG00000000063	-	90	56.015	Macaca_fascicularis
ENSPFOG00000002841	rnaseh1	98	46.865	ENSMFAG00000002323	-	97	46.865	Macaca_fascicularis
ENSPFOG00000002841	rnaseh1	98	46.865	ENSMMUG00000019280	-	97	46.865	Macaca_mulatta
ENSPFOG00000002841	rnaseh1	90	56.391	ENSMNEG00000040183	-	90	56.391	Macaca_nemestrina
ENSPFOG00000002841	rnaseh1	98	46.865	ENSMNEG00000029676	-	97	46.865	Macaca_nemestrina
ENSPFOG00000002841	rnaseh1	98	48.515	ENSMLEG00000028662	-	97	48.515	Mandrillus_leucophaeus
ENSPFOG00000002841	rnaseh1	84	56.048	ENSMLEG00000039352	-	98	56.504	Mandrillus_leucophaeus
ENSPFOG00000002841	rnaseh1	100	69.595	ENSMAMG00000019725	rnaseh1	96	73.162	Mastacembelus_armatus
ENSPFOG00000002841	rnaseh1	100	72.667	ENSMZEG00005013006	rnaseh1	97	73.000	Maylandia_zebra
ENSPFOG00000002841	rnaseh1	81	54.839	ENSMGAG00000013979	RNASEH1	99	54.839	Meleagris_gallopavo
ENSPFOG00000002841	rnaseh1	90	56.667	ENSMAUG00000014957	Rnaseh1	90	56.667	Mesocricetus_auratus
ENSPFOG00000002841	rnaseh1	89	56.818	ENSMICG00000033156	RNASEH1	88	56.818	Microcebus_murinus
ENSPFOG00000002841	rnaseh1	90	55.926	ENSMOCG00000015522	Rnaseh1	90	55.926	Microtus_ochrogaster
ENSPFOG00000002841	rnaseh1	99	70.648	ENSMMOG00000015902	rnaseh1	97	70.648	Mola_mola
ENSPFOG00000002841	rnaseh1	100	51.342	ENSMODG00000014491	-	99	51.342	Monodelphis_domestica
ENSPFOG00000002841	rnaseh1	80	48.945	ENSMODG00000028814	-	91	51.261	Monodelphis_domestica
ENSPFOG00000002841	rnaseh1	100	67.677	ENSMALG00000010565	rnaseh1	98	67.677	Monopterus_albus
ENSPFOG00000002841	rnaseh1	90	56.827	MGP_CAROLIEiJ_G0017660	Rnaseh1	90	56.827	Mus_caroli
ENSPFOG00000002841	rnaseh1	90	57.196	ENSMUSG00000020630	Rnaseh1	90	57.196	Mus_musculus
ENSPFOG00000002841	rnaseh1	89	55.133	MGP_PahariEiJ_G0029418	Rnaseh1	90	56.296	Mus_pahari
ENSPFOG00000002841	rnaseh1	90	57.519	MGP_SPRETEiJ_G0018502	Rnaseh1	90	57.519	Mus_spretus
ENSPFOG00000002841	rnaseh1	51	65.563	ENSMPUG00000012984	RNASEH1	73	65.563	Mustela_putorius_furo
ENSPFOG00000002841	rnaseh1	90	56.391	ENSNGAG00000015966	Rnaseh1	85	56.391	Nannospalax_galili
ENSPFOG00000002841	rnaseh1	100	72.000	ENSNBRG00000008739	rnaseh1	97	72.333	Neolamprologus_brichardi
ENSPFOG00000002841	rnaseh1	90	48.881	ENSNLEG00000015400	RNASEH1	88	48.881	Nomascus_leucogenys
ENSPFOG00000002841	rnaseh1	82	49.180	ENSNLEG00000000059	-	88	49.180	Nomascus_leucogenys
ENSPFOG00000002841	rnaseh1	99	35.593	ENSMEUG00000003610	-	99	35.593	Notamacropus_eugenii
ENSPFOG00000002841	rnaseh1	91	59.259	ENSOPRG00000005072	RNASEH1	90	59.259	Ochotona_princeps
ENSPFOG00000002841	rnaseh1	89	58.271	ENSODEG00000000235	Rnaseh1	86	58.271	Octodon_degus
ENSPFOG00000002841	rnaseh1	92	76.449	ENSONIG00000018697	rnaseh1	99	76.449	Oreochromis_niloticus
ENSPFOG00000002841	rnaseh1	90	55.351	ENSOCUG00000006117	RNASEH1	90	55.762	Oryctolagus_cuniculus
ENSPFOG00000002841	rnaseh1	92	72.894	ENSORLG00000018127	rnaseh1	97	72.894	Oryzias_latipes
ENSPFOG00000002841	rnaseh1	100	69.257	ENSORLG00020013660	rnaseh1	98	69.257	Oryzias_latipes_hni
ENSPFOG00000002841	rnaseh1	100	69.257	ENSORLG00015011338	rnaseh1	98	69.257	Oryzias_latipes_hsok
ENSPFOG00000002841	rnaseh1	91	69.517	ENSOMEG00000004710	rnaseh1	99	69.517	Oryzias_melastigma
ENSPFOG00000002841	rnaseh1	89	57.090	ENSOGAG00000017176	RNASEH1	89	57.090	Otolemur_garnettii
ENSPFOG00000002841	rnaseh1	93	48.611	ENSOARG00000005386	RNASEH1	93	48.611	Ovis_aries
ENSPFOG00000002841	rnaseh1	90	56.343	ENSPPAG00000034221	RNASEH1	90	56.343	Pan_paniscus
ENSPFOG00000002841	rnaseh1	90	54.511	ENSPPRG00000015513	RNASEH1	89	54.511	Panthera_pardus
ENSPFOG00000002841	rnaseh1	84	54.839	ENSPTIG00000019034	RNASEH1	83	54.839	Panthera_tigris_altaica
ENSPFOG00000002841	rnaseh1	83	48.606	ENSPTRG00000043403	-	91	48.606	Pan_troglodytes
ENSPFOG00000002841	rnaseh1	90	56.343	ENSPTRG00000011614	RNASEH1	90	56.343	Pan_troglodytes
ENSPFOG00000002841	rnaseh1	90	54.779	ENSPANG00000000443	RNASEH1	98	54.688	Papio_anubis
ENSPFOG00000002841	rnaseh1	90	50.189	ENSPANG00000018246	-	89	50.189	Papio_anubis
ENSPFOG00000002841	rnaseh1	92	59.420	ENSPKIG00000003146	rnaseh1	99	61.232	Paramormyrops_kingsleyae
ENSPFOG00000002841	rnaseh1	90	54.613	ENSPSIG00000002937	RNASEH1	99	54.613	Pelodiscus_sinensis
ENSPFOG00000002841	rnaseh1	98	63.574	ENSPMGG00000017463	rnaseh1	99	63.574	Periophthalmus_magnuspinnatus
ENSPFOG00000002841	rnaseh1	90	54.579	ENSPEMG00000022465	-	90	57.090	Peromyscus_maniculatus_bairdii
ENSPFOG00000002841	rnaseh1	52	33.548	ENSPCIG00000026047	-	87	33.548	Phascolarctos_cinereus
ENSPFOG00000002841	rnaseh1	100	49.664	ENSPCIG00000023334	-	99	49.664	Phascolarctos_cinereus
ENSPFOG00000002841	rnaseh1	75	79.730	ENSPLAG00000021349	-	85	79.730	Poecilia_latipinna
ENSPFOG00000002841	rnaseh1	100	98.983	ENSPMEG00000016826	rnaseh1	100	98.983	Poecilia_mexicana
ENSPFOG00000002841	rnaseh1	100	93.688	ENSPREG00000012197	rnaseh1	100	93.688	Poecilia_reticulata
ENSPFOG00000002841	rnaseh1	82	52.439	ENSPPYG00000008067	-	90	52.439	Pongo_abelii
ENSPFOG00000002841	rnaseh1	90	45.522	ENSPPYG00000025873	RNASEH1	88	45.522	Pongo_abelii
ENSPFOG00000002841	rnaseh1	91	54.613	ENSPCAG00000002500	RNASEH1	90	54.613	Procavia_capensis
ENSPFOG00000002841	rnaseh1	90	50.000	ENSPCOG00000019444	RNASEH1	89	50.000	Propithecus_coquereli
ENSPFOG00000002841	rnaseh1	91	53.358	ENSPVAG00000002070	RNASEH1	91	53.358	Pteropus_vampyrus
ENSPFOG00000002841	rnaseh1	100	72.333	ENSPNYG00000001292	rnaseh1	97	72.667	Pundamilia_nyererei
ENSPFOG00000002841	rnaseh1	99	61.333	ENSPNAG00000022344	rnaseh1	99	61.333	Pygocentrus_nattereri
ENSPFOG00000002841	rnaseh1	89	58.175	ENSRNOG00000008584	Rnaseh1	90	56.667	Rattus_norvegicus
ENSPFOG00000002841	rnaseh1	90	55.639	ENSRBIG00000034222	RNASEH1	89	55.639	Rhinopithecus_bieti
ENSPFOG00000002841	rnaseh1	90	55.639	ENSRROG00000041761	RNASEH1	89	55.639	Rhinopithecus_roxellana
ENSPFOG00000002841	rnaseh1	89	52.273	YMR234W	-	85	52.273	Saccharomyces_cerevisiae
ENSPFOG00000002841	rnaseh1	89	57.037	ENSSBOG00000025411	RNASEH1	89	57.037	Saimiri_boliviensis_boliviensis
ENSPFOG00000002841	rnaseh1	91	55.678	ENSSHAG00000013051	RNASEH1	88	55.678	Sarcophilus_harrisii
ENSPFOG00000002841	rnaseh1	99	59.355	ENSSFOG00015002709	rnaseh1	98	59.871	Scleropages_formosus
ENSPFOG00000002841	rnaseh1	99	69.863	ENSSMAG00000007586	rnaseh1	96	69.863	Scophthalmus_maximus
ENSPFOG00000002841	rnaseh1	96	72.085	ENSSDUG00000008217	rnaseh1	94	74.532	Seriola_dumerili
ENSPFOG00000002841	rnaseh1	93	69.343	ENSSLDG00000000442	rnaseh1	97	71.875	Seriola_lalandi_dorsalis
ENSPFOG00000002841	rnaseh1	91	55.678	ENSSPUG00000006644	RNASEH1	93	55.678	Sphenodon_punctatus
ENSPFOG00000002841	rnaseh1	99	72.260	ENSSPAG00000009353	rnaseh1	96	72.260	Stegastes_partitus
ENSPFOG00000002841	rnaseh1	91	56.835	ENSSSCG00000025305	RNASEH1	90	56.835	Sus_scrofa
ENSPFOG00000002841	rnaseh1	91	55.914	ENSTGUG00000012980	RNASEH1	93	55.830	Taeniopygia_guttata
ENSPFOG00000002841	rnaseh1	95	70.819	ENSTRUG00000015774	rnaseh1	96	72.491	Takifugu_rubripes
ENSPFOG00000002841	rnaseh1	91	73.234	ENSTNIG00000010715	rnaseh1	96	73.234	Tetraodon_nigroviridis
ENSPFOG00000002841	rnaseh1	91	54.182	ENSTTRG00000001615	RNASEH1	90	54.182	Tursiops_truncatus
ENSPFOG00000002841	rnaseh1	51	65.772	ENSUAMG00000018254	RNASEH1	78	64.901	Ursus_americanus
ENSPFOG00000002841	rnaseh1	77	49.789	ENSUMAG00000003941	RNASEH1	74	49.789	Ursus_maritimus
ENSPFOG00000002841	rnaseh1	91	48.718	ENSVPAG00000011589	RNASEH1	90	48.718	Vicugna_pacos
ENSPFOG00000002841	rnaseh1	98	52.041	ENSVVUG00000008633	RNASEH1	88	52.041	Vulpes_vulpes
ENSPFOG00000002841	rnaseh1	89	37.643	ENSXETG00000030371	-	99	37.643	Xenopus_tropicalis
ENSPFOG00000002841	rnaseh1	90	56.667	ENSXETG00000001212	rnaseh1	99	49.677	Xenopus_tropicalis
ENSPFOG00000002841	rnaseh1	99	93.174	ENSXMAG00000002357	rnaseh1	99	93.174	Xiphophorus_maculatus