EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000002908 (Gene tree)
Gene ID: 103148827
Gene Symbol: hnrnpub
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 14630 bases
Position: chrKI519823.1:819189-833818
Accession: 103148827
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000002868	SAP	PF02037.27	2.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000002872	-	5441	-	ENSPFOP00000002868	815 (aa)	XP_007567840	A0A087XAR5

Gene Model

Click here to download ENSPFOG00000002908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000002908's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000002908	hnrnpub	73	33.442	ENSPFOG00000008050	si:ch211-107m4.1	75	37.385
ENSPFOG00000002908	hnrnpub	70	62.857	ENSPFOG00000014230	HNRNPUL1	54	64.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000002908	hnrnpub	89	60.811	ENSG00000153187	HNRNPU	99	63.333	Homo_sapiens
ENSPFOG00000002908	hnrnpub	100	82.540	ENSAPOG00000017400	hnrnpub	100	82.007	Acanthochromis_polyacanthus
ENSPFOG00000002908	hnrnpub	89	60.811	ENSAMEG00000009145	HNRNPU	79	64.062	Ailuropoda_melanoleuca
ENSPFOG00000002908	hnrnpub	100	74.007	ENSACIG00000012138	hnrnpub	96	82.131	Amphilophus_citrinellus
ENSPFOG00000002908	hnrnpub	100	84.371	ENSAOCG00000015843	hnrnpub	100	82.864	Amphiprion_ocellaris
ENSPFOG00000002908	hnrnpub	100	84.371	ENSAPEG00000014679	hnrnpub	100	82.864	Amphiprion_percula
ENSPFOG00000002908	hnrnpub	98	83.002	ENSATEG00000016178	hnrnpub	97	83.706	Anabas_testudineus
ENSPFOG00000002908	hnrnpub	87	66.667	ENSACAG00000004511	HNRNPU	78	66.667	Anolis_carolinensis
ENSPFOG00000002908	hnrnpub	85	54.720	ENSANAG00000033895	-	75	53.744	Aotus_nancymaae
ENSPFOG00000002908	hnrnpub	100	82.195	ENSACLG00000008165	hnrnpub	100	81.585	Astatotilapia_calliptera
ENSPFOG00000002908	hnrnpub	89	60.811	ENSBTAG00000007606	HNRNPU	81	64.062	Bos_taurus
ENSPFOG00000002908	hnrnpub	89	60.811	ENSCJAG00000016914	HNRNPU	81	64.062	Callithrix_jacchus
ENSPFOG00000002908	hnrnpub	80	55.793	ENSCAFG00020000918	HNRNPU	75	54.038	Canis_lupus_dingo
ENSPFOG00000002908	hnrnpub	80	55.793	ENSCHIG00000004900	HNRNPU	75	54.130	Capra_hircus
ENSPFOG00000002908	hnrnpub	89	62.162	ENSCPOG00000011887	HNRNPU	64	65.625	Cavia_porcellus
ENSPFOG00000002908	hnrnpub	89	60.811	ENSCCAG00000037859	-	81	64.062	Cebus_capucinus
ENSPFOG00000002908	hnrnpub	89	60.526	ENSCATG00000035273	HNRNPU	81	64.062	Cercocebus_atys
ENSPFOG00000002908	hnrnpub	89	62.162	ENSCLAG00000007100	HNRNPU	64	65.625	Chinchilla_lanigera
ENSPFOG00000002908	hnrnpub	80	55.488	ENSCSAG00000009219	HNRNPU	75	53.744	Chlorocebus_sabaeus
ENSPFOG00000002908	hnrnpub	86	78.261	ENSCHOG00000001387	HNRNPU	60	78.261	Choloepus_hoffmanni
ENSPFOG00000002908	hnrnpub	86	59.831	ENSCPBG00000009415	HNRNPU	79	67.241	Chrysemys_picta_bellii
ENSPFOG00000002908	hnrnpub	89	60.526	ENSCANG00000022780	HNRNPU	79	64.062	Colobus_angolensis_palliatus
ENSPFOG00000002908	hnrnpub	89	60.000	ENSCGRG00001020525	Hnrnpu	62	66.219	Cricetulus_griseus_chok1gshd
ENSPFOG00000002908	hnrnpub	100	75.474	ENSCSEG00000010804	hnrnpub	100	74.044	Cynoglossus_semilaevis
ENSPFOG00000002908	hnrnpub	92	77.302	ENSCVAG00000004280	hnrnpub	100	82.573	Cyprinodon_variegatus
ENSPFOG00000002908	hnrnpub	100	60.195	ENSDARG00000015206	hnrnpua	100	55.676	Danio_rerio
ENSPFOG00000002908	hnrnpub	100	60.796	ENSDARG00000004735	hnrnpub	100	58.184	Danio_rerio
ENSPFOG00000002908	hnrnpub	86	78.261	ENSDNOG00000000215	HNRNPU	69	78.261	Dasypus_novemcinctus
ENSPFOG00000002908	hnrnpub	80	55.793	ENSDORG00000015491	Hnrnpu	74	54.863	Dipodomys_ordii
ENSPFOG00000002908	hnrnpub	94	55.488	ENSETEG00000014565	HNRNPU	80	64.062	Echinops_telfairi
ENSPFOG00000002908	hnrnpub	81	55.472	ENSEASG00005003017	HNRNPU	58	64.468	Equus_asinus_asinus
ENSPFOG00000002908	hnrnpub	81	55.322	ENSECAG00000007955	HNRNPU	58	64.255	Equus_caballus
ENSPFOG00000002908	hnrnpub	100	71.546	ENSELUG00000010733	hnrnpub	100	70.141	Esox_lucius
ENSPFOG00000002908	hnrnpub	80	55.708	ENSFCAG00000002156	HNRNPU	74	54.038	Felis_catus
ENSPFOG00000002908	hnrnpub	93	67.742	ENSFDAG00000006026	HNRNPU	79	67.742	Fukomys_damarensis
ENSPFOG00000002908	hnrnpub	100	90.557	ENSFHEG00000022639	hnrnpub	74	91.639	Fundulus_heteroclitus
ENSPFOG00000002908	hnrnpub	100	70.484	ENSGMOG00000001755	hnrnpub	80	76.911	Gadus_morhua
ENSPFOG00000002908	hnrnpub	72	70.175	ENSGALG00000010671	HNRNPU	78	70.175	Gallus_gallus
ENSPFOG00000002908	hnrnpub	100	97.232	ENSGAFG00000009369	hnrnpub	100	97.232	Gambusia_affinis
ENSPFOG00000002908	hnrnpub	100	70.890	ENSGACG00000004679	hnrnpub	99	70.455	Gasterosteus_aculeatus
ENSPFOG00000002908	hnrnpub	89	60.811	ENSGGOG00000004061	HNRNPU	64	65.032	Gorilla_gorilla
ENSPFOG00000002908	hnrnpub	100	82.561	ENSHBUG00000012290	hnrnpub	100	81.951	Haplochromis_burtoni
ENSPFOG00000002908	hnrnpub	89	62.162	ENSHGLG00000010594	-	62	66.443	Heterocephalus_glaber_female
ENSPFOG00000002908	hnrnpub	91	80.435	ENSHGLG00100015093	HNRNPU	78	80.435	Heterocephalus_glaber_male
ENSPFOG00000002908	hnrnpub	100	70.833	ENSHCOG00000020091	hnrnpub	83	75.143	Hippocampus_comes
ENSPFOG00000002908	hnrnpub	77	91.489	ENSIPUG00000007749	hnrnpu	79	83.333	Ictalurus_punctatus
ENSPFOG00000002908	hnrnpub	86	83.721	ENSJJAG00000011371	Hnrnpu	81	65.079	Jaculus_jaculus
ENSPFOG00000002908	hnrnpub	100	83.051	ENSKMAG00000004532	hnrnpub	100	81.917	Kryptolebias_marmoratus
ENSPFOG00000002908	hnrnpub	100	81.873	ENSLBEG00000022520	hnrnpub	100	81.630	Labrus_bergylta
ENSPFOG00000002908	hnrnpub	99	45.309	ENSLACG00000017463	HNRNPU	78	71.698	Latimeria_chalumnae
ENSPFOG00000002908	hnrnpub	92	68.351	ENSLOCG00000016652	hnrnpua	83	65.766	Lepisosteus_oculatus
ENSPFOG00000002908	hnrnpub	99	50.173	ENSLAFG00000021377	HNRNPU	64	64.606	Loxodonta_africana
ENSPFOG00000002908	hnrnpub	89	60.526	ENSMFAG00000037308	HNRNPU	81	64.062	Macaca_fascicularis
ENSPFOG00000002908	hnrnpub	80	55.488	ENSMMUG00000021098	HNRNPU	76	53.744	Macaca_mulatta
ENSPFOG00000002908	hnrnpub	89	60.526	ENSMNEG00000043645	HNRNPU	81	64.062	Macaca_nemestrina
ENSPFOG00000002908	hnrnpub	100	84.634	ENSMAMG00000007196	hnrnpub	100	84.390	Mastacembelus_armatus
ENSPFOG00000002908	hnrnpub	100	82.195	ENSMZEG00005003185	hnrnpub	100	81.585	Maylandia_zebra
ENSPFOG00000002908	hnrnpub	91	60.000	ENSMAUG00000008842	Hnrnpu	64	65.079	Mesocricetus_auratus
ENSPFOG00000002908	hnrnpub	89	60.526	ENSMICG00000004616	HNRNPU	78	64.062	Microcebus_murinus
ENSPFOG00000002908	hnrnpub	92	58.442	ENSMOCG00000015623	Hnrnpu	64	65.079	Microtus_ochrogaster
ENSPFOG00000002908	hnrnpub	88	63.077	ENSMODG00000006515	HNRNPU	64	64.615	Monodelphis_domestica
ENSPFOG00000002908	hnrnpub	96	83.249	ENSMALG00000018243	hnrnpub	99	83.036	Monopterus_albus
ENSPFOG00000002908	hnrnpub	80	56.402	MGP_CAROLIEiJ_G0014962	Hnrnpu	59	64.043	Mus_caroli
ENSPFOG00000002908	hnrnpub	80	56.402	ENSMUSG00000039630	Hnrnpu	59	64.043	Mus_musculus
ENSPFOG00000002908	hnrnpub	80	55.690	MGP_PahariEiJ_G0028193	Hnrnpu	76	53.235	Mus_pahari
ENSPFOG00000002908	hnrnpub	80	56.402	MGP_SPRETEiJ_G0015761	Hnrnpu	59	64.043	Mus_spretus
ENSPFOG00000002908	hnrnpub	90	59.459	ENSMLUG00000000475	HNRNPU	65	64.680	Myotis_lucifugus
ENSPFOG00000002908	hnrnpub	99	49.481	ENSNGAG00000019075	Hnrnpu	59	64.043	Nannospalax_galili
ENSPFOG00000002908	hnrnpub	100	82.195	ENSNBRG00000017855	hnrnpub	100	81.585	Neolamprologus_brichardi
ENSPFOG00000002908	hnrnpub	80	63.077	ENSMEUG00000000541	HNRNPU	64	64.615	Notamacropus_eugenii
ENSPFOG00000002908	hnrnpub	100	79.804	ENSONIG00000001260	hnrnpub	100	79.804	Oreochromis_niloticus
ENSPFOG00000002908	hnrnpub	81	60.811	ENSOCUG00000014469	HNRNPU	61	65.245	Oryctolagus_cuniculus
ENSPFOG00000002908	hnrnpub	100	81.273	ENSORLG00000016114	hnrnpub	100	81.395	Oryzias_latipes
ENSPFOG00000002908	hnrnpub	100	81.518	ENSORLG00020005363	hnrnpub	100	81.640	Oryzias_latipes_hni
ENSPFOG00000002908	hnrnpub	100	81.296	ENSORLG00015001190	hnrnpub	100	81.540	Oryzias_latipes_hsok
ENSPFOG00000002908	hnrnpub	100	82.375	ENSOMEG00000014951	hnrnpub	100	82.007	Oryzias_melastigma
ENSPFOG00000002908	hnrnpub	80	55.793	ENSOGAG00000014024	HNRNPU	58	64.255	Otolemur_garnettii
ENSPFOG00000002908	hnrnpub	88	64.615	ENSOARG00000004985	HNRNPU	71	65.000	Ovis_aries
ENSPFOG00000002908	hnrnpub	89	60.811	ENSPPAG00000038652	HNRNPU	81	64.062	Pan_paniscus
ENSPFOG00000002908	hnrnpub	92	60.811	ENSPPRG00000002662	HNRNPU	81	64.062	Panthera_pardus
ENSPFOG00000002908	hnrnpub	89	60.811	ENSPTRG00000002182	HNRNPU	81	64.062	Pan_troglodytes
ENSPFOG00000002908	hnrnpub	85	54.720	ENSPANG00000011643	HNRNPU	76	53.744	Papio_anubis
ENSPFOG00000002908	hnrnpub	100	64.243	ENSPKIG00000006885	hnrnpua	100	63.441	Paramormyrops_kingsleyae
ENSPFOG00000002908	hnrnpub	100	63.744	ENSPKIG00000022332	hnrnpub	61	73.101	Paramormyrops_kingsleyae
ENSPFOG00000002908	hnrnpub	88	63.077	ENSPCIG00000008657	HNRNPU	80	64.615	Phascolarctos_cinereus
ENSPFOG00000002908	hnrnpub	100	99.632	ENSPLAG00000004160	hnrnpub	100	99.632	Poecilia_latipinna
ENSPFOG00000002908	hnrnpub	80	53.823	ENSPCOG00000003883	-	59	63.169	Propithecus_coquereli
ENSPFOG00000002908	hnrnpub	89	60.526	ENSPCOG00000018655	-	64	64.819	Propithecus_coquereli
ENSPFOG00000002908	hnrnpub	89	60.811	ENSPVAG00000002581	HNRNPU	64	65.245	Pteropus_vampyrus
ENSPFOG00000002908	hnrnpub	100	82.439	ENSPNYG00000021642	hnrnpub	100	81.829	Pundamilia_nyererei
ENSPFOG00000002908	hnrnpub	100	64.748	ENSPNAG00000001055	hnrnpub	100	60.599	Pygocentrus_nattereri
ENSPFOG00000002908	hnrnpub	80	56.317	ENSRNOG00000033790	Hnrnpu	58	64.592	Rattus_norvegicus
ENSPFOG00000002908	hnrnpub	85	54.036	ENSRBIG00000031519	HNRNPU	64	63.734	Rhinopithecus_bieti
ENSPFOG00000002908	hnrnpub	85	54.422	ENSRROG00000041642	HNRNPU	75	53.744	Rhinopithecus_roxellana
ENSPFOG00000002908	hnrnpub	100	63.550	ENSSFOG00015019004	hnrnpu	98	63.672	Scleropages_formosus
ENSPFOG00000002908	hnrnpub	100	64.769	ENSSFOG00015001124	hnrnpub	82	68.398	Scleropages_formosus
ENSPFOG00000002908	hnrnpub	85	84.582	ENSSMAG00000003607	hnrnpub	100	78.040	Scophthalmus_maximus
ENSPFOG00000002908	hnrnpub	100	82.667	ENSSDUG00000005912	hnrnpub	100	83.758	Seriola_dumerili
ENSPFOG00000002908	hnrnpub	100	81.884	ENSSLDG00000004899	hnrnpub	100	83.092	Seriola_lalandi_dorsalis
ENSPFOG00000002908	hnrnpub	87	82.927	ENSSPUG00000011393	HNRNPU	80	74.000	Sphenodon_punctatus
ENSPFOG00000002908	hnrnpub	100	82.864	ENSSPAG00000011853	hnrnpub	100	83.231	Stegastes_partitus
ENSPFOG00000002908	hnrnpub	89	60.811	ENSSSCG00000010877	HNRNPU	64	64.606	Sus_scrofa
ENSPFOG00000002908	hnrnpub	100	75.899	ENSTRUG00000007759	hnrnpub	100	74.251	Takifugu_rubripes
ENSPFOG00000002908	hnrnpub	89	60.811	ENSUAMG00000021120	HNRNPU	79	54.154	Ursus_americanus
ENSPFOG00000002908	hnrnpub	100	51.171	ENSUMAG00000012322	HNRNPU	84	58.462	Ursus_maritimus
ENSPFOG00000002908	hnrnpub	83	60.811	ENSVPAG00000010520	HNRNPU	85	64.062	Vicugna_pacos
ENSPFOG00000002908	hnrnpub	80	55.793	ENSVVUG00000026524	HNRNPU	72	64.468	Vulpes_vulpes
ENSPFOG00000002908	hnrnpub	99	48.284	ENSXETG00000011386	hnrnpu	56	63.576	Xenopus_tropicalis
ENSPFOG00000002908	hnrnpub	100	98.776	ENSXMAG00000010356	hnrnpub	100	98.776	Xiphophorus_maculatus