EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000003118 (Gene tree)
Gene ID: 103129782
Gene Symbol: shq1
Alias: -
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 74887 bases
Position: chrKI520187.1:114998-189884
Accession: 103129782
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000003065	SHQ1	PF04925.15	1.1e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000003069	-	2529	-	ENSPFOP00000003065	542 (aa)	XP_007541036	A0A087XBB2

Gene Model

Click here to download ENSPFOG00000003118's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000003118's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000003118	shq1	97	53.737	ENSG00000144736	SHQ1	100	78.000	Homo_sapiens
ENSPFOG00000003118	shq1	98	68.288	ENSAPOG00000000397	shq1	91	69.730	Acanthochromis_polyacanthus
ENSPFOG00000003118	shq1	97	52.518	ENSAMEG00000015140	SHQ1	76	59.909	Ailuropoda_melanoleuca
ENSPFOG00000003118	shq1	99	68.571	ENSACIG00000021249	shq1	92	68.525	Amphilophus_citrinellus
ENSPFOG00000003118	shq1	98	69.052	ENSAOCG00000023311	shq1	91	70.430	Amphiprion_ocellaris
ENSPFOG00000003118	shq1	98	69.495	ENSAPEG00000021686	shq1	90	70.705	Amphiprion_percula
ENSPFOG00000003118	shq1	98	69.982	ENSATEG00000008475	shq1	90	69.565	Anabas_testudineus
ENSPFOG00000003118	shq1	81	57.333	ENSAPLG00000013926	SHQ1	86	59.318	Anas_platyrhynchos
ENSPFOG00000003118	shq1	78	60.970	ENSACAG00000014809	SHQ1	65	61.086	Anolis_carolinensis
ENSPFOG00000003118	shq1	97	40.255	ENSANAG00000030500	-	72	44.550	Aotus_nancymaae
ENSPFOG00000003118	shq1	97	53.501	ENSANAG00000029241	SHQ1	75	60.137	Aotus_nancymaae
ENSPFOG00000003118	shq1	99	68.525	ENSACLG00000023077	shq1	92	64.555	Astatotilapia_calliptera
ENSPFOG00000003118	shq1	79	61.072	ENSAMXG00000043822	shq1	75	61.521	Astyanax_mexicanus
ENSPFOG00000003118	shq1	97	50.086	ENSBTAG00000005436	SHQ1	75	60.137	Bos_taurus
ENSPFOG00000003118	shq1	97	52.847	ENSCJAG00000015131	SHQ1	75	59.909	Callithrix_jacchus
ENSPFOG00000003118	shq1	97	51.706	ENSCAFG00000006434	SHQ1	75	59.226	Canis_familiaris
ENSPFOG00000003118	shq1	97	51.706	ENSCAFG00020016743	SHQ1	75	59.226	Canis_lupus_dingo
ENSPFOG00000003118	shq1	72	60.100	ENSCHIG00000012271	SHQ1	68	59.453	Capra_hircus
ENSPFOG00000003118	shq1	75	56.867	ENSTSYG00000014439	SHQ1	75	57.110	Carlito_syrichta
ENSPFOG00000003118	shq1	88	46.976	ENSCAPG00000009343	SHQ1	63	65.000	Cavia_aperea
ENSPFOG00000003118	shq1	82	58.150	ENSCPOG00000011443	SHQ1	74	59.361	Cavia_porcellus
ENSPFOG00000003118	shq1	91	44.689	ENSCCAG00000036087	-	73	45.794	Cebus_capucinus
ENSPFOG00000003118	shq1	97	46.679	ENSCCAG00000027080	SHQ1	73	52.620	Cebus_capucinus
ENSPFOG00000003118	shq1	95	54.797	ENSCATG00000041238	SHQ1	75	61.048	Cercocebus_atys
ENSPFOG00000003118	shq1	81	59.020	ENSCLAG00000004206	SHQ1	75	59.909	Chinchilla_lanigera
ENSPFOG00000003118	shq1	81	50.740	ENSCSAG00000011514	SHQ1	70	58.857	Chlorocebus_sabaeus
ENSPFOG00000003118	shq1	63	50.000	ENSCHOG00000003273	-	84	65.000	Choloepus_hoffmanni
ENSPFOG00000003118	shq1	81	59.111	ENSCPBG00000006441	SHQ1	71	59.685	Chrysemys_picta_bellii
ENSPFOG00000003118	shq1	72	42.821	ENSCING00000008013	-	95	42.334	Ciona_intestinalis
ENSPFOG00000003118	shq1	72	40.355	ENSCSAVG00000002332	-	98	39.401	Ciona_savignyi
ENSPFOG00000003118	shq1	97	52.847	ENSCANG00000039295	SHQ1	76	60.820	Colobus_angolensis_palliatus
ENSPFOG00000003118	shq1	79	59.226	ENSCGRG00001012583	Shq1	77	58.542	Cricetulus_griseus_chok1gshd
ENSPFOG00000003118	shq1	79	59.226	ENSCGRG00000009849	Shq1	77	58.542	Cricetulus_griseus_crigri
ENSPFOG00000003118	shq1	98	64.298	ENSCSEG00000007829	shq1	91	64.613	Cynoglossus_semilaevis
ENSPFOG00000003118	shq1	97	78.771	ENSCVAG00000020049	shq1	93	79.304	Cyprinodon_variegatus
ENSPFOG00000003118	shq1	99	57.274	ENSDARG00000058522	shq1	88	56.538	Danio_rerio
ENSPFOG00000003118	shq1	97	49.479	ENSDNOG00000033937	SHQ1	75	60.592	Dasypus_novemcinctus
ENSPFOG00000003118	shq1	75	53.110	ENSETEG00000005766	SHQ1	76	52.847	Echinops_telfairi
ENSPFOG00000003118	shq1	67	46.341	ENSEBUG00000005445	shq1	78	46.857	Eptatretus_burgeri
ENSPFOG00000003118	shq1	81	59.688	ENSEASG00005002237	SHQ1	75	60.592	Equus_asinus_asinus
ENSPFOG00000003118	shq1	81	60.134	ENSECAG00000015673	SHQ1	74	61.048	Equus_caballus
ENSPFOG00000003118	shq1	81	60.268	ENSEEUG00000010568	SHQ1	76	60.592	Erinaceus_europaeus
ENSPFOG00000003118	shq1	97	64.151	ENSELUG00000003476	shq1	89	62.782	Esox_lucius
ENSPFOG00000003118	shq1	99	52.236	ENSFCAG00000012781	SHQ1	76	59.909	Felis_catus
ENSPFOG00000003118	shq1	76	61.848	ENSFALG00000013428	SHQ1	79	58.859	Ficedula_albicollis
ENSPFOG00000003118	shq1	75	59.809	ENSFDAG00000005595	SHQ1	67	58.998	Fukomys_damarensis
ENSPFOG00000003118	shq1	99	78.559	ENSFHEG00000017552	shq1	94	77.798	Fundulus_heteroclitus
ENSPFOG00000003118	shq1	72	71.795	ENSGMOG00000007350	shq1	99	71.795	Gadus_morhua
ENSPFOG00000003118	shq1	97	52.509	ENSGALG00000007798	SHQ1	71	61.416	Gallus_gallus
ENSPFOG00000003118	shq1	72	76.667	ENSGACG00000011797	shq1	99	76.410	Gasterosteus_aculeatus
ENSPFOG00000003118	shq1	97	53.203	ENSGGOG00000034818	SHQ1	75	60.364	Gorilla_gorilla
ENSPFOG00000003118	shq1	99	68.468	ENSHBUG00000010857	shq1	92	67.690	Haplochromis_burtoni
ENSPFOG00000003118	shq1	75	58.852	ENSHGLG00000003637	SHQ1	68	58.770	Heterocephalus_glaber_female
ENSPFOG00000003118	shq1	75	58.852	ENSHGLG00100011957	SHQ1	68	58.770	Heterocephalus_glaber_male
ENSPFOG00000003118	shq1	97	64.804	ENSHCOG00000010799	shq1	91	64.060	Hippocampus_comes
ENSPFOG00000003118	shq1	80	63.510	ENSIPUG00000001247	shq1	74	63.972	Ictalurus_punctatus
ENSPFOG00000003118	shq1	97	52.052	ENSSTOG00000010043	SHQ1	79	58.087	Ictidomys_tridecemlineatus
ENSPFOG00000003118	shq1	75	60.287	ENSJJAG00000017611	Shq1	76	60.592	Jaculus_jaculus
ENSPFOG00000003118	shq1	97	72.913	ENSKMAG00000004457	shq1	91	73.234	Kryptolebias_marmoratus
ENSPFOG00000003118	shq1	81	59.375	ENSLACG00000014243	SHQ1	66	59.637	Latimeria_chalumnae
ENSPFOG00000003118	shq1	97	55.752	ENSLOCG00000009970	shq1	76	65.385	Lepisosteus_oculatus
ENSPFOG00000003118	shq1	97	53.025	ENSMFAG00000039148	SHQ1	75	61.048	Macaca_fascicularis
ENSPFOG00000003118	shq1	97	39.522	ENSMFAG00000037396	-	73	42.725	Macaca_fascicularis
ENSPFOG00000003118	shq1	88	50.584	ENSMMUG00000009571	SHQ1	70	59.335	Macaca_mulatta
ENSPFOG00000003118	shq1	97	39.522	ENSMMUG00000021761	-	73	42.725	Macaca_mulatta
ENSPFOG00000003118	shq1	97	53.025	ENSMNEG00000032667	SHQ1	75	61.048	Macaca_nemestrina
ENSPFOG00000003118	shq1	94	55.451	ENSMLEG00000038493	SHQ1	75	60.820	Mandrillus_leucophaeus
ENSPFOG00000003118	shq1	98	69.107	ENSMAMG00000023432	shq1	87	70.893	Mastacembelus_armatus
ENSPFOG00000003118	shq1	99	68.829	ENSMZEG00005008649	shq1	92	68.051	Maylandia_zebra
ENSPFOG00000003118	shq1	97	52.632	ENSMGAG00000009640	SHQ1	72	60.364	Meleagris_gallopavo
ENSPFOG00000003118	shq1	79	59.226	ENSMAUG00000022030	Shq1	77	58.542	Mesocricetus_auratus
ENSPFOG00000003118	shq1	83	56.624	ENSMICG00000009224	SHQ1	75	58.998	Microcebus_murinus
ENSPFOG00000003118	shq1	81	58.352	ENSMOCG00000017836	Shq1	77	58.998	Microtus_ochrogaster
ENSPFOG00000003118	shq1	98	67.455	ENSMMOG00000010569	shq1	92	66.667	Mola_mola
ENSPFOG00000003118	shq1	79	57.955	ENSMODG00000003926	SHQ1	78	57.727	Monodelphis_domestica
ENSPFOG00000003118	shq1	98	72.694	ENSMALG00000008870	shq1	90	70.795	Monopterus_albus
ENSPFOG00000003118	shq1	82	57.522	MGP_CAROLIEiJ_G0028689	Shq1	76	58.542	Mus_caroli
ENSPFOG00000003118	shq1	79	58.770	ENSMUSG00000035378	Shq1	76	58.770	Mus_musculus
ENSPFOG00000003118	shq1	82	58.022	MGP_PahariEiJ_G0022440	Shq1	76	59.453	Mus_pahari
ENSPFOG00000003118	shq1	89	54.527	MGP_SPRETEiJ_G0029717	Shq1	76	58.770	Mus_spretus
ENSPFOG00000003118	shq1	97	52.228	ENSMPUG00000017006	SHQ1	74	59.909	Mustela_putorius_furo
ENSPFOG00000003118	shq1	73	55.037	ENSMLUG00000013539	SHQ1	74	56.122	Myotis_lucifugus
ENSPFOG00000003118	shq1	90	49.184	ENSNGAG00000023317	Shq1	76	51.843	Nannospalax_galili
ENSPFOG00000003118	shq1	82	67.382	ENSNBRG00000024004	shq1	90	66.452	Neolamprologus_brichardi
ENSPFOG00000003118	shq1	97	53.915	ENSNLEG00000002731	SHQ1	75	60.820	Nomascus_leucogenys
ENSPFOG00000003118	shq1	75	56.481	ENSMEUG00000009350	-	70	56.481	Notamacropus_eugenii
ENSPFOG00000003118	shq1	97	51.306	ENSODEG00000009192	SHQ1	74	66.250	Octodon_degus
ENSPFOG00000003118	shq1	99	68.525	ENSONIG00000020264	shq1	92	67.928	Oreochromis_niloticus
ENSPFOG00000003118	shq1	97	50.000	ENSOCUG00000016695	SHQ1	74	60.364	Oryctolagus_cuniculus
ENSPFOG00000003118	shq1	97	70.455	ENSORLG00000023538	shq1	94	69.129	Oryzias_latipes
ENSPFOG00000003118	shq1	97	70.356	ENSORLG00020003697	shq1	94	68.797	Oryzias_latipes_hni
ENSPFOG00000003118	shq1	97	70.076	ENSORLG00015021040	shq1	94	68.750	Oryzias_latipes_hsok
ENSPFOG00000003118	shq1	98	68.901	ENSOMEG00000001225	shq1	96	68.529	Oryzias_melastigma
ENSPFOG00000003118	shq1	97	51.590	ENSOGAG00000003898	SHQ1	77	59.050	Otolemur_garnettii
ENSPFOG00000003118	shq1	82	55.895	ENSOARG00000009547	SHQ1	75	58.597	Ovis_aries
ENSPFOG00000003118	shq1	97	53.737	ENSPPAG00000027714	SHQ1	75	61.048	Pan_paniscus
ENSPFOG00000003118	shq1	97	40.147	ENSPPAG00000043263	-	73	41.995	Pan_paniscus
ENSPFOG00000003118	shq1	97	49.655	ENSPPRG00000004769	SHQ1	76	59.909	Panthera_pardus
ENSPFOG00000003118	shq1	97	47.652	ENSPTIG00000011478	SHQ1	75	57.373	Panthera_tigris_altaica
ENSPFOG00000003118	shq1	97	39.890	ENSPTRG00000048303	-	73	42.361	Pan_troglodytes
ENSPFOG00000003118	shq1	97	53.915	ENSPTRG00000015106	SHQ1	75	61.048	Pan_troglodytes
ENSPFOG00000003118	shq1	94	55.075	ENSPANG00000002881	SHQ1	75	61.276	Papio_anubis
ENSPFOG00000003118	shq1	78	66.118	ENSPKIG00000021517	shq1	72	64.806	Paramormyrops_kingsleyae
ENSPFOG00000003118	shq1	81	59.645	ENSPSIG00000005536	SHQ1	72	60.948	Pelodiscus_sinensis
ENSPFOG00000003118	shq1	98	59.672	ENSPMGG00000008838	shq1	92	60.073	Periophthalmus_magnuspinnatus
ENSPFOG00000003118	shq1	72	59.850	ENSPEMG00000000251	Shq1	76	58.542	Peromyscus_maniculatus_bairdii
ENSPFOG00000003118	shq1	81	56.659	ENSPMAG00000005372	shq1	94	58.413	Petromyzon_marinus
ENSPFOG00000003118	shq1	84	98.234	ENSPMEG00000011076	shq1	100	98.724	Poecilia_mexicana
ENSPFOG00000003118	shq1	94	90.643	ENSPREG00000000591	shq1	98	90.058	Poecilia_reticulata
ENSPFOG00000003118	shq1	97	53.286	ENSPPYG00000013717	SHQ1	75	61.048	Pongo_abelii
ENSPFOG00000003118	shq1	76	60.900	ENSPCAG00000009035	SHQ1	76	60.455	Procavia_capensis
ENSPFOG00000003118	shq1	75	58.852	ENSPCOG00000008415	SHQ1	75	59.681	Propithecus_coquereli
ENSPFOG00000003118	shq1	97	53.036	ENSPVAG00000017392	SHQ1	76	59.909	Pteropus_vampyrus
ENSPFOG00000003118	shq1	99	68.345	ENSPNYG00000003878	shq1	92	67.748	Pundamilia_nyererei
ENSPFOG00000003118	shq1	79	66.589	ENSPNAG00000026840	shq1	71	66.282	Pygocentrus_nattereri
ENSPFOG00000003118	shq1	81	58.259	ENSRNOG00000005433	Shq1	72	59.050	Rattus_norvegicus
ENSPFOG00000003118	shq1	97	51.444	ENSRBIG00000026280	SHQ1	75	59.165	Rhinopithecus_bieti
ENSPFOG00000003118	shq1	97	53.203	ENSRROG00000034126	SHQ1	76	61.276	Rhinopithecus_roxellana
ENSPFOG00000003118	shq1	75	54.545	ENSSBOG00000021038	SHQ1	73	54.670	Saimiri_boliviensis_boliviensis
ENSPFOG00000003118	shq1	79	59.091	ENSSHAG00000015077	SHQ1	77	59.091	Sarcophilus_harrisii
ENSPFOG00000003118	shq1	82	66.816	ENSSFOG00015016241	shq1	78	67.285	Scleropages_formosus
ENSPFOG00000003118	shq1	98	70.182	ENSSMAG00000016151	shq1	91	68.852	Scophthalmus_maximus
ENSPFOG00000003118	shq1	99	69.858	ENSSDUG00000011986	shq1	92	69.627	Seriola_dumerili
ENSPFOG00000003118	shq1	99	68.984	ENSSLDG00000013908	shq1	92	68.750	Seriola_lalandi_dorsalis
ENSPFOG00000003118	shq1	62	57.558	ENSSARG00000007119	SHQ1	60	56.395	Sorex_araneus
ENSPFOG00000003118	shq1	81	48.195	ENSSPUG00000011526	-	87	48.620	Sphenodon_punctatus
ENSPFOG00000003118	shq1	97	50.173	ENSSSCG00000011518	SHQ1	75	60.364	Sus_scrofa
ENSPFOG00000003118	shq1	75	61.905	ENSTGUG00000009933	SHQ1	76	61.486	Taeniopygia_guttata
ENSPFOG00000003118	shq1	98	63.521	ENSTRUG00000009446	shq1	93	63.603	Takifugu_rubripes
ENSPFOG00000003118	shq1	79	69.425	ENSTNIG00000007354	shq1	96	69.495	Tetraodon_nigroviridis
ENSPFOG00000003118	shq1	82	57.363	ENSTTRG00000005320	SHQ1	75	58.770	Tursiops_truncatus
ENSPFOG00000003118	shq1	99	51.068	ENSUMAG00000024031	SHQ1	74	60.233	Ursus_maritimus
ENSPFOG00000003118	shq1	88	43.945	ENSVPAG00000004880	SHQ1	73	52.430	Vicugna_pacos
ENSPFOG00000003118	shq1	97	51.526	ENSVVUG00000013906	SHQ1	75	59.226	Vulpes_vulpes
ENSPFOG00000003118	shq1	81	59.910	ENSXETG00000032215	shq1	71	60.046	Xenopus_tropicalis