EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000003199 (Gene tree)
Gene ID: 103143860
Gene Symbol: r3hdm4
Alias: -
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 8975 bases
Position: chrKI519726.1:930399-939373
Accession: 103143860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000003116	R3H	PF01424.22	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000003120	-	3946	XM_007560565	ENSPFOP00000003116	254 (aa)	XP_007560627	A0A087XBG3

Gene Model

Click here to download ENSPFOG00000003199's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000003199's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000003199	r3hdm4	93	55.823	ENSG00000198858	R3HDM4	97	55.417	Homo_sapiens
ENSPFOG00000003199	r3hdm4	92	57.322	ENSAMEG00000003001	R3HDM4	97	57.322	Ailuropoda_melanoleuca
ENSPFOG00000003199	r3hdm4	100	85.938	ENSACIG00000004672	r3hdm4	100	85.938	Amphilophus_citrinellus
ENSPFOG00000003199	r3hdm4	98	80.159	ENSATEG00000015913	r3hdm4	99	80.159	Anabas_testudineus
ENSPFOG00000003199	r3hdm4	92	56.723	ENSANAG00000029748	R3HDM4	98	56.723	Aotus_nancymaae
ENSPFOG00000003199	r3hdm4	93	56.225	ENSBTAG00000046406	R3HDM4	91	56.225	Bos_taurus
ENSPFOG00000003199	r3hdm4	93	56.048	ENSCJAG00000020114	R3HDM4	92	56.048	Callithrix_jacchus
ENSPFOG00000003199	r3hdm4	92	57.143	ENSCAFG00000019665	R3HDM4	87	57.143	Canis_familiaris
ENSPFOG00000003199	r3hdm4	92	57.563	ENSCAFG00020016880	R3HDM4	87	57.563	Canis_lupus_dingo
ENSPFOG00000003199	r3hdm4	93	56.627	ENSCHIG00000020110	R3HDM4	91	57.563	Capra_hircus
ENSPFOG00000003199	r3hdm4	92	56.303	ENSCCAG00000019955	R3HDM4	86	56.303	Cebus_capucinus
ENSPFOG00000003199	r3hdm4	93	55.378	ENSCATG00000037269	R3HDM4	93	56.175	Cercocebus_atys
ENSPFOG00000003199	r3hdm4	92	56.118	ENSCLAG00000007094	R3HDM4	97	56.118	Chinchilla_lanigera
ENSPFOG00000003199	r3hdm4	93	56.000	ENSCSAG00000012574	R3HDM4	93	56.000	Chlorocebus_sabaeus
ENSPFOG00000003199	r3hdm4	100	59.623	ENSCPBG00000009805	R3HDM4	100	59.623	Chrysemys_picta_bellii
ENSPFOG00000003199	r3hdm4	92	57.322	ENSCANG00000040439	R3HDM4	83	57.322	Colobus_angolensis_palliatus
ENSPFOG00000003199	r3hdm4	91	55.696	ENSCGRG00001021650	R3hdm4	89	55.696	Cricetulus_griseus_chok1gshd
ENSPFOG00000003199	r3hdm4	91	55.696	ENSCGRG00000013169	R3hdm4	89	55.696	Cricetulus_griseus_crigri
ENSPFOG00000003199	r3hdm4	100	75.391	ENSCSEG00000018211	r3hdm4	100	75.391	Cynoglossus_semilaevis
ENSPFOG00000003199	r3hdm4	100	90.588	ENSCVAG00000017127	r3hdm4	100	90.588	Cyprinodon_variegatus
ENSPFOG00000003199	r3hdm4	91	55.649	ENSDORG00000006605	R3hdm4	96	55.649	Dipodomys_ordii
ENSPFOG00000003199	r3hdm4	92	56.723	ENSEASG00005021556	R3HDM4	86	56.723	Equus_asinus_asinus
ENSPFOG00000003199	r3hdm4	92	56.723	ENSECAG00000000003	R3HDM4	87	56.723	Equus_caballus
ENSPFOG00000003199	r3hdm4	93	56.627	ENSFCAG00000042437	R3HDM4	92	56.627	Felis_catus
ENSPFOG00000003199	r3hdm4	90	61.638	ENSFALG00000013938	R3HDM4	96	61.638	Ficedula_albicollis
ENSPFOG00000003199	r3hdm4	92	55.882	ENSFDAG00000017040	R3HDM4	97	55.882	Fukomys_damarensis
ENSPFOG00000003199	r3hdm4	100	90.196	ENSFHEG00000017636	r3hdm4	100	90.196	Fundulus_heteroclitus
ENSPFOG00000003199	r3hdm4	95	70.661	ENSGMOG00000001231	r3hdm4	100	70.661	Gadus_morhua
ENSPFOG00000003199	r3hdm4	91	60.759	ENSGALG00000001998	R3HDM4	90	60.759	Gallus_gallus
ENSPFOG00000003199	r3hdm4	100	94.510	ENSGAFG00000004173	r3hdm4	100	94.510	Gambusia_affinis
ENSPFOG00000003199	r3hdm4	100	59.623	ENSGAGG00000019698	R3HDM4	100	59.623	Gopherus_agassizii
ENSPFOG00000003199	r3hdm4	92	57.143	ENSGGOG00000008040	R3HDM4	97	57.143	Gorilla_gorilla
ENSPFOG00000003199	r3hdm4	100	85.547	ENSHBUG00000014810	r3hdm4	100	85.547	Haplochromis_burtoni
ENSPFOG00000003199	r3hdm4	92	54.852	ENSHGLG00000016194	R3HDM4	88	55.042	Heterocephalus_glaber_female
ENSPFOG00000003199	r3hdm4	99	77.647	ENSHCOG00000008422	r3hdm4	99	77.647	Hippocampus_comes
ENSPFOG00000003199	r3hdm4	100	67.442	ENSIPUG00000006716	r3hdm4	100	67.442	Ictalurus_punctatus
ENSPFOG00000003199	r3hdm4	92	55.462	ENSSTOG00000023015	R3HDM4	97	55.462	Ictidomys_tridecemlineatus
ENSPFOG00000003199	r3hdm4	91	55.319	ENSJJAG00000012475	R3hdm4	89	55.319	Jaculus_jaculus
ENSPFOG00000003199	r3hdm4	100	85.156	ENSKMAG00000005853	r3hdm4	100	85.156	Kryptolebias_marmoratus
ENSPFOG00000003199	r3hdm4	100	82.031	ENSLBEG00000000730	r3hdm4	100	82.031	Labrus_bergylta
ENSPFOG00000003199	r3hdm4	100	61.832	ENSLACG00000016445	R3HDM4	100	61.832	Latimeria_chalumnae
ENSPFOG00000003199	r3hdm4	100	68.582	ENSLOCG00000002423	r3hdm4	100	68.582	Lepisosteus_oculatus
ENSPFOG00000003199	r3hdm4	91	56.356	ENSLAFG00000017796	R3HDM4	91	56.356	Loxodonta_africana
ENSPFOG00000003199	r3hdm4	93	56.400	ENSMFAG00000044131	R3HDM4	93	56.400	Macaca_fascicularis
ENSPFOG00000003199	r3hdm4	87	57.778	ENSMMUG00000009682	R3HDM4	90	57.778	Macaca_mulatta
ENSPFOG00000003199	r3hdm4	92	57.322	ENSMNEG00000044115	R3HDM4	96	57.322	Macaca_nemestrina
ENSPFOG00000003199	r3hdm4	93	55.556	ENSMLEG00000035693	R3HDM4	89	56.379	Mandrillus_leucophaeus
ENSPFOG00000003199	r3hdm4	87	81.166	ENSMAMG00000005652	r3hdm4	91	81.166	Mastacembelus_armatus
ENSPFOG00000003199	r3hdm4	89	55.794	ENSMAUG00000010611	R3hdm4	90	55.794	Mesocricetus_auratus
ENSPFOG00000003199	r3hdm4	92	56.303	ENSMICG00000010124	R3HDM4	88	56.303	Microcebus_murinus
ENSPFOG00000003199	r3hdm4	91	54.894	ENSMOCG00000002646	R3hdm4	89	55.932	Microtus_ochrogaster
ENSPFOG00000003199	r3hdm4	100	81.569	ENSMMOG00000008253	r3hdm4	100	81.569	Mola_mola
ENSPFOG00000003199	r3hdm4	89	59.130	ENSMODG00000005698	R3HDM4	99	59.130	Monodelphis_domestica
ENSPFOG00000003199	r3hdm4	100	79.688	ENSMALG00000018856	r3hdm4	100	79.688	Monopterus_albus
ENSPFOG00000003199	r3hdm4	91	54.894	MGP_CAROLIEiJ_G0015551	R3hdm4	89	56.170	Mus_caroli
ENSPFOG00000003199	r3hdm4	91	54.741	ENSMUSG00000035781	R3hdm4	89	56.034	Mus_musculus
ENSPFOG00000003199	r3hdm4	91	54.321	MGP_PahariEiJ_G0030964	R3hdm4	99	52.852	Mus_pahari
ENSPFOG00000003199	r3hdm4	99	52.091	MGP_SPRETEiJ_G0016369	-	84	53.232	Mus_spretus
ENSPFOG00000003199	r3hdm4	93	58.025	ENSMPUG00000009394	R3HDM4	90	58.025	Mustela_putorius_furo
ENSPFOG00000003199	r3hdm4	100	84.766	ENSNBRG00000004438	r3hdm4	100	84.766	Neolamprologus_brichardi
ENSPFOG00000003199	r3hdm4	87	53.478	ENSNLEG00000001022	R3HDM4	99	53.478	Nomascus_leucogenys
ENSPFOG00000003199	r3hdm4	92	57.563	ENSMEUG00000011020	R3HDM4	99	57.563	Notamacropus_eugenii
ENSPFOG00000003199	r3hdm4	92	56.118	ENSODEG00000011745	R3HDM4	88	56.118	Octodon_degus
ENSPFOG00000003199	r3hdm4	100	84.766	ENSONIG00000012675	r3hdm4	92	84.766	Oreochromis_niloticus
ENSPFOG00000003199	r3hdm4	100	83.529	ENSOMEG00000003005	r3hdm4	100	83.529	Oryzias_melastigma
ENSPFOG00000003199	r3hdm4	91	57.203	ENSOGAG00000025656	R3HDM4	89	57.203	Otolemur_garnettii
ENSPFOG00000003199	r3hdm4	92	56.723	ENSOARG00000009945	R3HDM4	97	56.723	Ovis_aries
ENSPFOG00000003199	r3hdm4	92	56.723	ENSPPAG00000042371	R3HDM4	97	56.723	Pan_paniscus
ENSPFOG00000003199	r3hdm4	93	56.400	ENSPANG00000015203	R3HDM4	93	56.400	Papio_anubis
ENSPFOG00000003199	r3hdm4	100	63.740	ENSPKIG00000007421	r3hdm4	100	65.267	Paramormyrops_kingsleyae
ENSPFOG00000003199	r3hdm4	100	72.656	ENSPMGG00000020467	r3hdm4	100	72.656	Periophthalmus_magnuspinnatus
ENSPFOG00000003199	r3hdm4	91	57.447	ENSPEMG00000008365	Tmem259	97	57.447	Peromyscus_maniculatus_bairdii
ENSPFOG00000003199	r3hdm4	100	99.606	ENSPMEG00000014183	r3hdm4	100	99.606	Poecilia_mexicana
ENSPFOG00000003199	r3hdm4	100	98.425	ENSPREG00000010709	r3hdm4	100	98.425	Poecilia_reticulata
ENSPFOG00000003199	r3hdm4	92	56.780	ENSPPYG00000009297	R3HDM4	88	56.780	Pongo_abelii
ENSPFOG00000003199	r3hdm4	58	59.603	ENSPCAG00000010997	R3HDM4	55	59.603	Procavia_capensis
ENSPFOG00000003199	r3hdm4	92	57.983	ENSPCOG00000016785	R3HDM4	88	57.983	Propithecus_coquereli
ENSPFOG00000003199	r3hdm4	100	85.547	ENSPNYG00000017489	r3hdm4	100	85.547	Pundamilia_nyererei
ENSPFOG00000003199	r3hdm4	91	54.430	ENSRNOG00000011489	R3hdm4	89	55.508	Rattus_norvegicus
ENSPFOG00000003199	r3hdm4	92	57.322	ENSRROG00000028842	R3HDM4	88	57.322	Rhinopithecus_roxellana
ENSPFOG00000003199	r3hdm4	92	56.198	ENSSBOG00000019298	R3HDM4	73	56.225	Saimiri_boliviensis_boliviensis
ENSPFOG00000003199	r3hdm4	57	59.589	ENSSHAG00000003036	-	100	59.589	Sarcophilus_harrisii
ENSPFOG00000003199	r3hdm4	97	70.161	ENSSFOG00015020574	r3hdm4	91	69.880	Scleropages_formosus
ENSPFOG00000003199	r3hdm4	100	81.641	ENSSMAG00000021090	r3hdm4	74	81.641	Scophthalmus_maximus
ENSPFOG00000003199	r3hdm4	100	84.766	ENSSDUG00000008488	r3hdm4	100	84.766	Seriola_dumerili
ENSPFOG00000003199	r3hdm4	100	84.375	ENSSLDG00000025328	r3hdm4	100	84.375	Seriola_lalandi_dorsalis
ENSPFOG00000003199	r3hdm4	93	60.000	ENSSPUG00000005434	R3HDM4	93	60.000	Sphenodon_punctatus
ENSPFOG00000003199	r3hdm4	99	79.688	ENSSPAG00000002562	r3hdm4	99	79.688	Stegastes_partitus
ENSPFOG00000003199	r3hdm4	93	57.028	ENSSSCG00000013419	R3HDM4	91	57.028	Sus_scrofa
ENSPFOG00000003199	r3hdm4	77	53.960	ENSTGUG00000000663	R3HDM4	97	54.455	Taeniopygia_guttata
ENSPFOG00000003199	r3hdm4	92	58.051	ENSTTRG00000001470	R3HDM4	97	58.051	Tursiops_truncatus
ENSPFOG00000003199	r3hdm4	93	52.016	ENSUAMG00000005751	R3HDM4	100	57.333	Ursus_americanus
ENSPFOG00000003199	r3hdm4	93	56.225	ENSVVUG00000022685	R3HDM4	91	56.225	Vulpes_vulpes
ENSPFOG00000003199	r3hdm4	97	45.565	ENSXETG00000033624	R3HDM4	96	45.565	Xenopus_tropicalis
ENSPFOG00000003199	r3hdm4	100	94.531	ENSXCOG00000005127	r3hdm4	100	94.531	Xiphophorus_couchianus
ENSPFOG00000003199	r3hdm4	100	94.902	ENSXMAG00000022875	r3hdm4	100	94.902	Xiphophorus_maculatus