EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000003261 (Gene tree)
Gene ID: -
Gene Symbol: scaf4b
Alias: -
Full Name: SR-related CTD-associated factor 4b
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 23090 bases
Position: chrKI519838.1:382862-405951
Accession: ZDB-GENE-050506-42
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000003188	RRM_1	PF00076.22	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000003192	-	2727	-	ENSPFOP00000003188	909 (aa)	-	A0A087XBN5

Gene Model

Click here to download ENSPFOG00000003261's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000003261's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000003261	scaf4b	53	55.738	ENSAPOG00000002946	scaf4a	71	46.133	Acanthochromis_polyacanthus
ENSPFOG00000003261	scaf4b	78	70.000	ENSAPOG00000019615	scaf4b	83	70.000	Acanthochromis_polyacanthus
ENSPFOG00000003261	scaf4b	78	71.852	ENSAOCG00000010433	scaf4b	98	55.748	Amphiprion_ocellaris
ENSPFOG00000003261	scaf4b	78	71.852	ENSAPEG00000010913	scaf4b	98	55.531	Amphiprion_percula
ENSPFOG00000003261	scaf4b	78	71.004	ENSATEG00000011758	scaf4b	83	71.111	Anabas_testudineus
ENSPFOG00000003261	scaf4b	80	69.742	ENSACLG00000024833	scaf4b	83	69.742	Astatotilapia_calliptera
ENSPFOG00000003261	scaf4b	62	66.387	ENSCSEG00000012808	-	81	64.045	Cynoglossus_semilaevis
ENSPFOG00000003261	scaf4b	79	74.815	ENSCVAG00000009142	scaf4b	91	74.815	Cyprinodon_variegatus
ENSPFOG00000003261	scaf4b	72	53.020	ENSCVAG00000000925	SCAF8	55	52.096	Cyprinodon_variegatus
ENSPFOG00000003261	scaf4b	51	58.019	ENSDARG00000077093	scaf4a	60	54.198	Danio_rerio
ENSPFOG00000003261	scaf4b	79	74.265	ENSFHEG00000007634	scaf4b	83	75.368	Fundulus_heteroclitus
ENSPFOG00000003261	scaf4b	72	59.341	ENSFHEG00000008284	SCAF8	55	55.769	Fundulus_heteroclitus
ENSPFOG00000003261	scaf4b	76	70.849	ENSKMAG00000005742	scaf4b	96	53.252	Kryptolebias_marmoratus
ENSPFOG00000003261	scaf4b	67	47.244	ENSLACG00000013913	SCAF4	64	48.905	Latimeria_chalumnae
ENSPFOG00000003261	scaf4b	76	56.316	ENSORLG00000017358	SCAF8	60	37.188	Oryzias_latipes
ENSPFOG00000003261	scaf4b	65	71.429	ENSORLG00000003420	scaf4b	81	71.371	Oryzias_latipes
ENSPFOG00000003261	scaf4b	64	71.146	ENSORLG00020013853	scaf4b	84	65.714	Oryzias_latipes_hni
ENSPFOG00000003261	scaf4b	99	74.917	ENSPLAG00000004403	-	98	74.917	Poecilia_latipinna
ENSPFOG00000003261	scaf4b	86	83.700	ENSPMEG00000006666	-	98	75.361	Poecilia_mexicana
ENSPFOG00000003261	scaf4b	79	89.513	ENSPREG00000013510	scaf4b	98	72.364	Poecilia_reticulata
ENSPFOG00000003261	scaf4b	80	70.111	ENSPNYG00000010526	scaf4b	83	70.111	Pundamilia_nyererei
ENSPFOG00000003261	scaf4b	80	70.370	ENSSMAG00000003738	scaf4b	81	70.480	Scophthalmus_maximus
ENSPFOG00000003261	scaf4b	78	69.286	ENSSDUG00000012380	scaf4b	83	69.395	Seriola_dumerili
ENSPFOG00000003261	scaf4b	78	68.929	ENSSLDG00000023152	-	83	69.039	Seriola_lalandi_dorsalis
ENSPFOG00000003261	scaf4b	63	64.662	ENSTRUG00000009536	-	80	62.903	Takifugu_rubripes
ENSPFOG00000003261	scaf4b	62	52.239	ENSXETG00000007351	scaf4	63	48.438	Xenopus_tropicalis