EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000003497 (Gene tree)
Gene ID: 103138894
Gene Symbol: cnot1
Alias: -
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 27546 bases
Position: chrKI519665.1:470133-497678
Accession: 103138894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000003789	Not1	PF04054.15	1.4e-150	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000003797	-	7516	XM_016672057	ENSPFOP00000003789	2360 (aa)	XP_016527543	A0A087XDD6

Gene Model

Click here to download ENSPFOG00000003497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000003497's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000003497	cnot1	100	90.085	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSPFOG00000003497	cnot1	100	92.422	ENSAPOG00000005042	cnot1	99	92.464	Acanthochromis_polyacanthus
ENSPFOG00000003497	cnot1	100	90.127	ENSAMEG00000017298	CNOT1	99	90.042	Ailuropoda_melanoleuca
ENSPFOG00000003497	cnot1	90	93.982	ENSACIG00000016003	cnot1	99	94.217	Amphilophus_citrinellus
ENSPFOG00000003497	cnot1	100	94.242	ENSAPEG00000022342	cnot1	99	94.285	Amphiprion_percula
ENSPFOG00000003497	cnot1	100	92.298	ENSATEG00000012892	cnot1	99	92.340	Anabas_testudineus
ENSPFOG00000003497	cnot1	100	89.025	ENSAPLG00000007162	CNOT1	99	89.236	Anas_platyrhynchos
ENSPFOG00000003497	cnot1	92	88.270	ENSACAG00000001602	CNOT1	98	88.203	Anolis_carolinensis
ENSPFOG00000003497	cnot1	100	87.037	ENSANAG00000038198	CNOT1	99	88.764	Aotus_nancymaae
ENSPFOG00000003497	cnot1	100	93.559	ENSACLG00000014234	cnot1	99	93.559	Astatotilapia_calliptera
ENSPFOG00000003497	cnot1	100	92.966	ENSAMXG00000013170	cnot1	99	93.263	Astyanax_mexicanus
ENSPFOG00000003497	cnot1	95	95.397	ENSBTAG00000020782	CNOT1	99	96.610	Bos_taurus
ENSPFOG00000003497	cnot1	77	41.118	WBGene00002845	let-711	83	55.869	Caenorhabditis_elegans
ENSPFOG00000003497	cnot1	100	89.767	ENSCJAG00000011318	CNOT1	99	89.683	Callithrix_jacchus
ENSPFOG00000003497	cnot1	100	89.620	ENSCAFG00000008426	CNOT1	99	89.620	Canis_familiaris
ENSPFOG00000003497	cnot1	95	95.513	ENSCAFG00020010156	CNOT1	99	95.923	Canis_lupus_dingo
ENSPFOG00000003497	cnot1	100	89.937	ENSCHIG00000010452	CNOT1	99	89.852	Capra_hircus
ENSPFOG00000003497	cnot1	100	89.894	ENSTSYG00000006888	CNOT1	99	89.944	Carlito_syrichta
ENSPFOG00000003497	cnot1	100	86.004	ENSCPOG00000013026	CNOT1	99	86.089	Cavia_porcellus
ENSPFOG00000003497	cnot1	100	88.245	ENSCCAG00000026333	CNOT1	99	88.304	Cebus_capucinus
ENSPFOG00000003497	cnot1	100	89.852	ENSCATG00000032625	CNOT1	99	89.901	Cercocebus_atys
ENSPFOG00000003497	cnot1	100	89.894	ENSCLAG00000006289	CNOT1	99	89.852	Chinchilla_lanigera
ENSPFOG00000003497	cnot1	100	89.852	ENSCSAG00000004731	CNOT1	99	89.767	Chlorocebus_sabaeus
ENSPFOG00000003497	cnot1	80	97.287	ENSCHOG00000009712	CNOT1	82	97.287	Choloepus_hoffmanni
ENSPFOG00000003497	cnot1	93	95.208	ENSCPBG00000026222	CNOT1	97	95.208	Chrysemys_picta_bellii
ENSPFOG00000003497	cnot1	100	58.403	ENSCING00000009149	-	99	58.121	Ciona_intestinalis
ENSPFOG00000003497	cnot1	89	62.389	ENSCSAVG00000002414	-	95	79.470	Ciona_savignyi
ENSPFOG00000003497	cnot1	100	88.077	ENSCANG00000040534	CNOT1	99	88.268	Colobus_angolensis_palliatus
ENSPFOG00000003497	cnot1	100	89.429	ENSCGRG00001016365	Cnot1	99	89.642	Cricetulus_griseus_chok1gshd
ENSPFOG00000003497	cnot1	100	89.429	ENSCGRG00000001714	Cnot1	99	89.642	Cricetulus_griseus_crigri
ENSPFOG00000003497	cnot1	97	99.855	ENSCVAG00000018930	cnot1	99	99.855	Cyprinodon_variegatus
ENSPFOG00000003497	cnot1	100	92.845	ENSDARG00000004174	cnot1	99	92.803	Danio_rerio
ENSPFOG00000003497	cnot1	100	87.616	ENSDNOG00000013250	CNOT1	99	87.616	Dasypus_novemcinctus
ENSPFOG00000003497	cnot1	100	52.411	FBgn0085436	Not1	98	48.100	Drosophila_melanogaster
ENSPFOG00000003497	cnot1	84	93.897	ENSETEG00000012806	CNOT1	83	93.897	Echinops_telfairi
ENSPFOG00000003497	cnot1	79	80.960	ENSEBUG00000011534	cnot1	94	80.960	Eptatretus_burgeri
ENSPFOG00000003497	cnot1	95	95.397	ENSEASG00005005819	CNOT1	99	96.610	Equus_asinus_asinus
ENSPFOG00000003497	cnot1	100	89.725	ENSECAG00000009889	CNOT1	99	89.767	Equus_caballus
ENSPFOG00000003497	cnot1	89	88.634	ENSEEUG00000006015	CNOT1	88	88.634	Erinaceus_europaeus
ENSPFOG00000003497	cnot1	100	93.057	ENSELUG00000014085	cnot1	99	92.765	Esox_lucius
ENSPFOG00000003497	cnot1	100	89.629	ENSFCAG00000025155	CNOT1	99	89.629	Felis_catus
ENSPFOG00000003497	cnot1	100	89.556	ENSFALG00000007285	CNOT1	99	89.471	Ficedula_albicollis
ENSPFOG00000003497	cnot1	100	89.852	ENSFDAG00000013399	CNOT1	99	89.858	Fukomys_damarensis
ENSPFOG00000003497	cnot1	100	97.463	ENSFHEG00000020574	cnot1	99	97.463	Fundulus_heteroclitus
ENSPFOG00000003497	cnot1	92	93.472	ENSGMOG00000012864	cnot1	100	93.426	Gadus_morhua
ENSPFOG00000003497	cnot1	100	89.387	ENSGALG00000002301	CNOT1	99	89.302	Gallus_gallus
ENSPFOG00000003497	cnot1	100	97.203	ENSGAFG00000015005	cnot1	99	97.203	Gambusia_affinis
ENSPFOG00000003497	cnot1	92	94.771	ENSGACG00000002606	cnot1	97	98.250	Gasterosteus_aculeatus
ENSPFOG00000003497	cnot1	100	89.641	ENSGAGG00000022646	CNOT1	99	90.922	Gopherus_agassizii
ENSPFOG00000003497	cnot1	100	89.894	ENSGGOG00000009547	CNOT1	99	89.810	Gorilla_gorilla
ENSPFOG00000003497	cnot1	100	93.644	ENSHBUG00000001729	cnot1	99	93.644	Haplochromis_burtoni
ENSPFOG00000003497	cnot1	100	89.767	ENSHGLG00000014322	CNOT1	99	89.771	Heterocephalus_glaber_female
ENSPFOG00000003497	cnot1	100	93.911	ENSHCOG00000006501	cnot1	99	93.996	Hippocampus_comes
ENSPFOG00000003497	cnot1	100	91.213	ENSIPUG00000011915	cnot1	99	91.213	Ictalurus_punctatus
ENSPFOG00000003497	cnot1	100	89.818	ENSSTOG00000005490	CNOT1	99	89.780	Ictidomys_tridecemlineatus
ENSPFOG00000003497	cnot1	100	89.302	ENSJJAG00000000633	Cnot1	99	89.340	Jaculus_jaculus
ENSPFOG00000003497	cnot1	100	96.232	ENSKMAG00000006149	cnot1	99	96.232	Kryptolebias_marmoratus
ENSPFOG00000003497	cnot1	95	97.699	ENSLBEG00000004740	cnot1	99	98.109	Labrus_bergylta
ENSPFOG00000003497	cnot1	100	89.937	ENSLACG00000010869	CNOT1	99	89.894	Latimeria_chalumnae
ENSPFOG00000003497	cnot1	100	92.839	ENSLOCG00000006324	cnot1	99	92.797	Lepisosteus_oculatus
ENSPFOG00000003497	cnot1	100	89.734	ENSLAFG00000000098	CNOT1	99	89.734	Loxodonta_africana
ENSPFOG00000003497	cnot1	100	90.085	ENSMFAG00000035888	CNOT1	99	90.000	Macaca_fascicularis
ENSPFOG00000003497	cnot1	100	89.810	ENSMMUG00000014625	CNOT1	94	98.545	Macaca_mulatta
ENSPFOG00000003497	cnot1	100	87.310	ENSMNEG00000031820	CNOT1	99	89.390	Macaca_nemestrina
ENSPFOG00000003497	cnot1	100	88.491	ENSMLEG00000040933	CNOT1	99	88.779	Mandrillus_leucophaeus
ENSPFOG00000003497	cnot1	100	92.506	ENSMAMG00000016524	cnot1	99	92.549	Mastacembelus_armatus
ENSPFOG00000003497	cnot1	100	89.725	ENSMZEG00005016210	cnot1	99	89.451	Maylandia_zebra
ENSPFOG00000003497	cnot1	100	89.661	ENSMGAG00000001908	CNOT1	99	89.576	Meleagris_gallopavo
ENSPFOG00000003497	cnot1	100	89.852	ENSMICG00000007071	CNOT1	99	89.987	Microcebus_murinus
ENSPFOG00000003497	cnot1	100	89.641	ENSMOCG00000017969	Cnot1	99	89.642	Microtus_ochrogaster
ENSPFOG00000003497	cnot1	100	90.940	ENSMMOG00000019134	cnot1	99	91.025	Mola_mola
ENSPFOG00000003497	cnot1	100	89.485	ENSMODG00000014199	CNOT1	99	89.603	Monodelphis_domestica
ENSPFOG00000003497	cnot1	100	93.480	ENSMALG00000008645	cnot1	99	93.565	Monopterus_albus
ENSPFOG00000003497	cnot1	95	96.190	MGP_CAROLIEiJ_G0031430	Cnot1	91	96.190	Mus_caroli
ENSPFOG00000003497	cnot1	100	89.831	ENSMUSG00000036550	Cnot1	99	89.788	Mus_musculus
ENSPFOG00000003497	cnot1	100	89.556	MGP_PahariEiJ_G0023028	Cnot1	99	89.685	Mus_pahari
ENSPFOG00000003497	cnot1	100	89.556	MGP_SPRETEiJ_G0032549	Cnot1	99	89.685	Mus_spretus
ENSPFOG00000003497	cnot1	100	89.894	ENSMPUG00000004830	CNOT1	99	89.810	Mustela_putorius_furo
ENSPFOG00000003497	cnot1	100	89.767	ENSMLUG00000003728	CNOT1	99	89.641	Myotis_lucifugus
ENSPFOG00000003497	cnot1	100	89.725	ENSNGAG00000018628	Cnot1	99	89.728	Nannospalax_galili
ENSPFOG00000003497	cnot1	97	87.385	ENSNBRG00000019358	cnot1	99	86.893	Neolamprologus_brichardi
ENSPFOG00000003497	cnot1	100	89.814	ENSNLEG00000003566	CNOT1	99	89.901	Nomascus_leucogenys
ENSPFOG00000003497	cnot1	87	91.051	ENSMEUG00000006145	CNOT1	87	91.051	Notamacropus_eugenii
ENSPFOG00000003497	cnot1	86	97.500	ENSOPRG00000005604	CNOT1	85	97.500	Ochotona_princeps
ENSPFOG00000003497	cnot1	100	89.810	ENSODEG00000016337	CNOT1	99	89.771	Octodon_degus
ENSPFOG00000003497	cnot1	100	95.381	ENSONIG00000007358	cnot1	99	95.381	Oreochromis_niloticus
ENSPFOG00000003497	cnot1	92	89.130	ENSOANG00000012109	CNOT1	99	89.491	Ornithorhynchus_anatinus
ENSPFOG00000003497	cnot1	100	89.776	ENSOCUG00000006911	CNOT1	99	89.767	Oryctolagus_cuniculus
ENSPFOG00000003497	cnot1	100	95.002	ENSORLG00000013734	cnot1	99	94.833	Oryzias_latipes
ENSPFOG00000003497	cnot1	98	94.735	ENSORLG00020017012	cnot1	99	94.648	Oryzias_latipes_hni
ENSPFOG00000003497	cnot1	98	94.691	ENSORLG00015007091	cnot1	99	94.605	Oryzias_latipes_hsok
ENSPFOG00000003497	cnot1	98	94.090	ENSOMEG00000015124	cnot1	99	94.176	Oryzias_melastigma
ENSPFOG00000003497	cnot1	100	89.937	ENSOGAG00000000543	CNOT1	99	89.852	Otolemur_garnettii
ENSPFOG00000003497	cnot1	100	89.937	ENSOARG00000001567	CNOT1	99	89.852	Ovis_aries
ENSPFOG00000003497	cnot1	100	89.852	ENSPPAG00000022013	CNOT1	99	89.901	Pan_paniscus
ENSPFOG00000003497	cnot1	100	89.894	ENSPPRG00000004867	CNOT1	99	89.810	Panthera_pardus
ENSPFOG00000003497	cnot1	100	89.894	ENSPTIG00000012589	CNOT1	99	89.810	Panthera_tigris_altaica
ENSPFOG00000003497	cnot1	100	89.587	ENSPTRG00000008183	CNOT1	99	89.901	Pan_troglodytes
ENSPFOG00000003497	cnot1	100	86.858	ENSPANG00000020901	CNOT1	99	86.773	Papio_anubis
ENSPFOG00000003497	cnot1	100	93.220	ENSPKIG00000023538	CNOT1	99	93.263	Paramormyrops_kingsleyae
ENSPFOG00000003497	cnot1	100	86.446	ENSPKIG00000002914	CNOT1	99	86.031	Paramormyrops_kingsleyae
ENSPFOG00000003497	cnot1	100	89.471	ENSPSIG00000005499	CNOT1	99	89.471	Pelodiscus_sinensis
ENSPFOG00000003497	cnot1	100	79.255	ENSPMAG00000009381	cnot1	99	79.052	Petromyzon_marinus
ENSPFOG00000003497	cnot1	95	95.607	ENSPCIG00000007343	CNOT1	99	96.822	Phascolarctos_cinereus
ENSPFOG00000003497	cnot1	95	98.360	ENSPLAG00000014018	cnot1	99	98.360	Poecilia_latipinna
ENSPFOG00000003497	cnot1	95	98.326	ENSPMEG00000005868	cnot1	99	98.326	Poecilia_mexicana
ENSPFOG00000003497	cnot1	95	98.190	ENSPREG00000018793	cnot1	99	98.190	Poecilia_reticulata
ENSPFOG00000003497	cnot1	100	89.894	ENSPPYG00000007410	CNOT1	99	89.810	Pongo_abelii
ENSPFOG00000003497	cnot1	87	88.298	ENSPCAG00000003241	CNOT1	87	88.298	Procavia_capensis
ENSPFOG00000003497	cnot1	100	89.545	ENSPCOG00000027139	CNOT1	99	89.944	Propithecus_coquereli
ENSPFOG00000003497	cnot1	100	87.104	ENSPVAG00000004243	CNOT1	99	87.357	Pteropus_vampyrus
ENSPFOG00000003497	cnot1	100	91.822	ENSPNYG00000012919	cnot1	99	91.543	Pundamilia_nyererei
ENSPFOG00000003497	cnot1	100	91.907	ENSPNAG00000000246	cnot1	99	91.992	Pygocentrus_nattereri
ENSPFOG00000003497	cnot1	100	89.514	ENSRNOG00000012271	Cnot1	99	89.598	Rattus_norvegicus
ENSPFOG00000003497	cnot1	100	87.690	ENSRBIG00000044598	CNOT1	99	87.872	Rhinopithecus_bieti
ENSPFOG00000003497	cnot1	100	89.852	ENSRROG00000000906	CNOT1	99	89.901	Rhinopithecus_roxellana
ENSPFOG00000003497	cnot1	100	85.618	ENSSBOG00000029155	CNOT1	99	85.751	Saimiri_boliviensis_boliviensis
ENSPFOG00000003497	cnot1	100	89.565	ENSSHAG00000012187	CNOT1	99	89.556	Sarcophilus_harrisii
ENSPFOG00000003497	cnot1	98	92.725	ENSSFOG00015017614	cnot1	99	92.510	Scleropages_formosus
ENSPFOG00000003497	cnot1	100	94.423	ENSSMAG00000013844	cnot1	99	94.507	Scophthalmus_maximus
ENSPFOG00000003497	cnot1	100	92.044	ENSSDUG00000021491	cnot1	99	92.086	Seriola_dumerili
ENSPFOG00000003497	cnot1	100	95.733	ENSSLDG00000014816	cnot1	99	95.733	Seriola_lalandi_dorsalis
ENSPFOG00000003497	cnot1	78	97.400	ENSSARG00000000762	CNOT1	88	97.400	Sorex_araneus
ENSPFOG00000003497	cnot1	100	94.539	ENSSPAG00000018802	cnot1	99	94.539	Stegastes_partitus
ENSPFOG00000003497	cnot1	95	95.397	ENSSSCG00000002799	CNOT1	99	96.610	Sus_scrofa
ENSPFOG00000003497	cnot1	100	89.485	ENSTGUG00000005919	CNOT1	99	89.400	Taeniopygia_guttata
ENSPFOG00000003497	cnot1	100	93.038	ENSTNIG00000018706	cnot1	99	93.038	Tetraodon_nigroviridis
ENSPFOG00000003497	cnot1	80	98.592	ENSTBEG00000000720	CNOT1	79	98.592	Tupaia_belangeri
ENSPFOG00000003497	cnot1	95	88.622	ENSTTRG00000008460	CNOT1	94	88.504	Tursiops_truncatus
ENSPFOG00000003497	cnot1	100	89.894	ENSUAMG00000009251	CNOT1	99	89.810	Ursus_americanus
ENSPFOG00000003497	cnot1	100	89.894	ENSUMAG00000021291	CNOT1	99	89.810	Ursus_maritimus
ENSPFOG00000003497	cnot1	97	91.648	ENSVPAG00000008846	CNOT1	96	91.648	Vicugna_pacos
ENSPFOG00000003497	cnot1	95	95.513	ENSVVUG00000024037	CNOT1	99	95.923	Vulpes_vulpes
ENSPFOG00000003497	cnot1	100	84.391	ENSXETG00000015900	cnot1	99	84.349	Xenopus_tropicalis
ENSPFOG00000003497	cnot1	100	97.331	ENSXCOG00000013552	cnot1	99	97.331	Xiphophorus_couchianus
ENSPFOG00000003497	cnot1	100	97.373	ENSXMAG00000006031	cnot1	99	97.373	Xiphophorus_maculatus