EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000003578 (Gene tree)
Gene ID: 103152441
Gene Symbol: snrnp48
Alias: -
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 5022 bases
Position: chrKI519920.1:697352-702373
Accession: 103152441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000003427	zf-U11-48K	PF05253.12	6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000003433	-	1324	XM_007572905	ENSPFOP00000003427	342 (aa)	XP_007572967	A0A087XCC4

Gene Model

Click here to download ENSPFOG00000003578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000003578's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000003578	snrnp48	81	45.092	ENSG00000168566	SNRNP48	73	52.191	Homo_sapiens
ENSPFOG00000003578	snrnp48	96	75.610	ENSAPOG00000021430	snrnp48	95	76.074	Acanthochromis_polyacanthus
ENSPFOG00000003578	snrnp48	92	43.844	ENSAMEG00000017349	SNRNP48	71	50.607	Ailuropoda_melanoleuca
ENSPFOG00000003578	snrnp48	94	70.717	ENSACIG00000002032	snrnp48	95	70.859	Amphilophus_citrinellus
ENSPFOG00000003578	snrnp48	95	73.926	ENSAOCG00000010562	snrnp48	95	74.540	Amphiprion_ocellaris
ENSPFOG00000003578	snrnp48	95	74.233	ENSAPEG00000003231	snrnp48	95	74.847	Amphiprion_percula
ENSPFOG00000003578	snrnp48	93	75.701	ENSATEG00000020210	snrnp48	94	76.324	Anabas_testudineus
ENSPFOG00000003578	snrnp48	81	49.320	ENSACAG00000002811	SNRNP48	87	45.302	Anolis_carolinensis
ENSPFOG00000003578	snrnp48	81	45.706	ENSANAG00000033538	SNRNP48	73	52.590	Aotus_nancymaae
ENSPFOG00000003578	snrnp48	94	57.187	ENSAMXG00000015309	snrnp48	78	65.134	Astyanax_mexicanus
ENSPFOG00000003578	snrnp48	92	43.881	ENSBTAG00000001123	SNRNP48	73	49.402	Bos_taurus
ENSPFOG00000003578	snrnp48	93	45.266	ENSCJAG00000021330	SNRNP48	95	45.122	Callithrix_jacchus
ENSPFOG00000003578	snrnp48	92	44.444	ENSCAFG00000009574	SNRNP48	67	48.551	Canis_familiaris
ENSPFOG00000003578	snrnp48	92	44.444	ENSCAFG00020013203	SNRNP48	72	50.403	Canis_lupus_dingo
ENSPFOG00000003578	snrnp48	92	44.179	ENSCHIG00000015216	SNRNP48	73	50.199	Capra_hircus
ENSPFOG00000003578	snrnp48	81	43.865	ENSTSYG00000000698	SNRNP48	73	51.793	Carlito_syrichta
ENSPFOG00000003578	snrnp48	87	44.620	ENSCAPG00000006768	SNRNP48	83	48.249	Cavia_aperea
ENSPFOG00000003578	snrnp48	93	45.266	ENSCPOG00000007910	SNRNP48	82	48.387	Cavia_porcellus
ENSPFOG00000003578	snrnp48	80	45.201	ENSCCAG00000035652	SNRNP48	73	52.016	Cebus_capucinus
ENSPFOG00000003578	snrnp48	93	45.401	ENSCATG00000033947	SNRNP48	73	51.793	Cercocebus_atys
ENSPFOG00000003578	snrnp48	93	44.970	ENSCLAG00000003765	SNRNP48	95	45.122	Chinchilla_lanigera
ENSPFOG00000003578	snrnp48	81	45.399	ENSCSAG00000007409	SNRNP48	73	52.590	Chlorocebus_sabaeus
ENSPFOG00000003578	snrnp48	83	46.865	ENSCPBG00000019146	SNRNP48	66	53.555	Chrysemys_picta_bellii
ENSPFOG00000003578	snrnp48	81	45.399	ENSCANG00000030017	SNRNP48	73	52.590	Colobus_angolensis_palliatus
ENSPFOG00000003578	snrnp48	93	44.543	ENSCGRG00001001076	-	75	50.000	Cricetulus_griseus_chok1gshd
ENSPFOG00000003578	snrnp48	84	41.497	ENSCGRG00001008805	-	80	43.750	Cricetulus_griseus_chok1gshd
ENSPFOG00000003578	snrnp48	93	44.543	ENSCGRG00000007781	Snrnp48	75	50.000	Cricetulus_griseus_crigri
ENSPFOG00000003578	snrnp48	75	70.703	ENSCSEG00000000722	snrnp48	76	69.030	Cynoglossus_semilaevis
ENSPFOG00000003578	snrnp48	92	83.387	ENSCVAG00000019829	snrnp48	72	86.331	Cyprinodon_variegatus
ENSPFOG00000003578	snrnp48	92	54.062	ENSDARG00000039989	snrnp48	79	57.778	Danio_rerio
ENSPFOG00000003578	snrnp48	80	47.500	ENSDNOG00000014978	SNRNP48	81	44.643	Dasypus_novemcinctus
ENSPFOG00000003578	snrnp48	93	44.048	ENSDORG00000015140	Snrnp48	74	50.794	Dipodomys_ordii
ENSPFOG00000003578	snrnp48	80	47.872	ENSEASG00005012021	SNRNP48	73	51.793	Equus_asinus_asinus
ENSPFOG00000003578	snrnp48	80	47.872	ENSECAG00000026937	SNRNP48	73	51.793	Equus_caballus
ENSPFOG00000003578	snrnp48	93	31.642	ENSEEUG00000015437	SNRNP48	79	35.055	Erinaceus_europaeus
ENSPFOG00000003578	snrnp48	94	60.177	ENSELUG00000009766	snrnp48	73	64.751	Esox_lucius
ENSPFOG00000003578	snrnp48	80	43.963	ENSFCAG00000018853	SNRNP48	73	50.806	Felis_catus
ENSPFOG00000003578	snrnp48	68	53.750	ENSFALG00000007797	SNRNP48	72	55.459	Ficedula_albicollis
ENSPFOG00000003578	snrnp48	93	45.723	ENSFDAG00000009231	SNRNP48	73	51.793	Fukomys_damarensis
ENSPFOG00000003578	snrnp48	64	88.341	ENSFHEG00000014647	snrnp48	95	85.921	Fundulus_heteroclitus
ENSPFOG00000003578	snrnp48	90	61.846	ENSGMOG00000018599	-	83	69.925	Gadus_morhua
ENSPFOG00000003578	snrnp48	77	51.119	ENSGALG00000013005	SNRNP48	68	58.049	Gallus_gallus
ENSPFOG00000003578	snrnp48	95	95.092	ENSGAFG00000021639	snrnp48	95	95.092	Gambusia_affinis
ENSPFOG00000003578	snrnp48	73	77.200	ENSGACG00000017756	-	76	77.953	Gasterosteus_aculeatus
ENSPFOG00000003578	snrnp48	83	46.711	ENSGAGG00000000865	SNRNP48	69	52.830	Gopherus_agassizii
ENSPFOG00000003578	snrnp48	81	45.706	ENSGGOG00000013220	SNRNP48	73	52.590	Gorilla_gorilla
ENSPFOG00000003578	snrnp48	94	76.636	ENSHBUG00000017066	snrnp48	94	76.074	Haplochromis_burtoni
ENSPFOG00000003578	snrnp48	93	43.491	ENSHGLG00000015241	SNRNP48	95	43.902	Heterocephalus_glaber_female
ENSPFOG00000003578	snrnp48	93	43.491	ENSHGLG00100010027	SNRNP48	95	43.902	Heterocephalus_glaber_male
ENSPFOG00000003578	snrnp48	74	73.228	ENSHCOG00000014066	snrnp48	94	66.265	Hippocampus_comes
ENSPFOG00000003578	snrnp48	93	45.266	ENSSTOG00000014635	SNRNP48	95	44.817	Ictidomys_tridecemlineatus
ENSPFOG00000003578	snrnp48	79	49.281	ENSJJAG00000011495	Snrnp48	72	51.822	Jaculus_jaculus
ENSPFOG00000003578	snrnp48	95	78.593	ENSKMAG00000016514	snrnp48	95	78.593	Kryptolebias_marmoratus
ENSPFOG00000003578	snrnp48	81	74.820	ENSLBEG00000026249	snrnp48	95	73.394	Labrus_bergylta
ENSPFOG00000003578	snrnp48	91	50.746	ENSLACG00000003958	SNRNP48	80	53.114	Latimeria_chalumnae
ENSPFOG00000003578	snrnp48	85	59.450	ENSLOCG00000004187	snrnp48	81	60.219	Lepisosteus_oculatus
ENSPFOG00000003578	snrnp48	80	48.763	ENSLAFG00000011152	SNRNP48	73	51.984	Loxodonta_africana
ENSPFOG00000003578	snrnp48	81	45.399	ENSMFAG00000045216	SNRNP48	73	52.590	Macaca_fascicularis
ENSPFOG00000003578	snrnp48	81	45.399	ENSMMUG00000014785	SNRNP48	73	52.590	Macaca_mulatta
ENSPFOG00000003578	snrnp48	81	45.706	ENSMNEG00000042269	SNRNP48	73	52.988	Macaca_nemestrina
ENSPFOG00000003578	snrnp48	81	45.399	ENSMLEG00000034004	SNRNP48	73	52.590	Mandrillus_leucophaeus
ENSPFOG00000003578	snrnp48	95	67.890	ENSMAMG00000018673	snrnp48	83	72.477	Mastacembelus_armatus
ENSPFOG00000003578	snrnp48	81	47.368	ENSMGAG00000006037	SNRNP48	68	58.537	Meleagris_gallopavo
ENSPFOG00000003578	snrnp48	96	43.529	ENSMAUG00000011944	Snrnp48	85	47.569	Mesocricetus_auratus
ENSPFOG00000003578	snrnp48	80	49.470	ENSMICG00000012497	SNRNP48	73	51.190	Microcebus_murinus
ENSPFOG00000003578	snrnp48	93	45.619	ENSMOCG00000015555	Snrnp48	84	48.592	Microtus_ochrogaster
ENSPFOG00000003578	snrnp48	56	80.208	ENSMMOG00000003072	-	61	80.208	Mola_mola
ENSPFOG00000003578	snrnp48	83	47.635	ENSMODG00000009996	SNRNP48	77	47.902	Monodelphis_domestica
ENSPFOG00000003578	snrnp48	96	72.866	ENSMALG00000005725	snrnp48	95	76.147	Monopterus_albus
ENSPFOG00000003578	snrnp48	93	44.838	MGP_CAROLIEiJ_G0018441	Snrnp48	84	47.887	Mus_caroli
ENSPFOG00000003578	snrnp48	93	44.838	ENSMUSG00000021431	Snrnp48	75	50.196	Mus_musculus
ENSPFOG00000003578	snrnp48	93	45.133	MGP_PahariEiJ_G0019509	Snrnp48	75	50.588	Mus_pahari
ENSPFOG00000003578	snrnp48	93	43.953	MGP_SPRETEiJ_G0019321	Snrnp48	75	50.196	Mus_spretus
ENSPFOG00000003578	snrnp48	93	44.838	ENSNGAG00000004849	Snrnp48	82	49.462	Nannospalax_galili
ENSPFOG00000003578	snrnp48	94	76.636	ENSNBRG00000012127	snrnp48	94	76.074	Neolamprologus_brichardi
ENSPFOG00000003578	snrnp48	81	45.399	ENSNLEG00000011667	SNRNP48	73	52.590	Nomascus_leucogenys
ENSPFOG00000003578	snrnp48	86	45.659	ENSOPRG00000015471	SNRNP48	77	52.016	Ochotona_princeps
ENSPFOG00000003578	snrnp48	94	77.259	ENSONIG00000001520	snrnp48	94	76.687	Oreochromis_niloticus
ENSPFOG00000003578	snrnp48	52	37.313	ENSOANG00000019888	-	99	37.321	Ornithorhynchus_anatinus
ENSPFOG00000003578	snrnp48	79	48.188	ENSOCUG00000005168	SNRNP48	83	50.781	Oryctolagus_cuniculus
ENSPFOG00000003578	snrnp48	87	75.168	ENSORLG00000015654	snrnp48	94	73.926	Oryzias_latipes
ENSPFOG00000003578	snrnp48	87	73.490	ENSORLG00020015976	snrnp48	80	73.313	Oryzias_latipes_hni
ENSPFOG00000003578	snrnp48	87	73.154	ENSORLG00015022379	snrnp48	80	73.006	Oryzias_latipes_hsok
ENSPFOG00000003578	snrnp48	94	74.143	ENSOMEG00000022007	snrnp48	94	73.926	Oryzias_melastigma
ENSPFOG00000003578	snrnp48	76	50.000	ENSOGAG00000005275	SNRNP48	84	50.000	Otolemur_garnettii
ENSPFOG00000003578	snrnp48	82	46.441	ENSOARG00000017319	SNRNP48	75	52.941	Ovis_aries
ENSPFOG00000003578	snrnp48	81	45.399	ENSPPAG00000032873	SNRNP48	81	48.387	Pan_paniscus
ENSPFOG00000003578	snrnp48	81	44.172	ENSPPRG00000004283	SNRNP48	73	50.996	Panthera_pardus
ENSPFOG00000003578	snrnp48	69	45.552	ENSPTIG00000013502	SNRNP48	71	54.369	Panthera_tigris_altaica
ENSPFOG00000003578	snrnp48	81	45.399	ENSPTRG00000017703	SNRNP48	81	48.387	Pan_troglodytes
ENSPFOG00000003578	snrnp48	81	45.399	ENSPANG00000000771	SNRNP48	73	52.590	Papio_anubis
ENSPFOG00000003578	snrnp48	91	54.624	ENSPKIG00000013703	snrnp48	54	63.529	Paramormyrops_kingsleyae
ENSPFOG00000003578	snrnp48	77	47.312	ENSPSIG00000002213	SNRNP48	64	54.589	Pelodiscus_sinensis
ENSPFOG00000003578	snrnp48	76	65.672	ENSPMGG00000008120	snrnp48	94	65.672	Periophthalmus_magnuspinnatus
ENSPFOG00000003578	snrnp48	93	45.266	ENSPEMG00000008872	Snrnp48	75	51.172	Peromyscus_maniculatus_bairdii
ENSPFOG00000003578	snrnp48	69	99.576	ENSPLAG00000002290	snrnp48	96	85.017	Poecilia_latipinna
ENSPFOG00000003578	snrnp48	100	99.415	ENSPMEG00000018033	snrnp48	100	99.415	Poecilia_mexicana
ENSPFOG00000003578	snrnp48	100	96.784	ENSPREG00000018541	snrnp48	100	96.784	Poecilia_reticulata
ENSPFOG00000003578	snrnp48	81	45.399	ENSPPYG00000016209	SNRNP48	73	52.590	Pongo_abelii
ENSPFOG00000003578	snrnp48	70	38.956	ENSPCAG00000011991	SNRNP48	97	39.464	Procavia_capensis
ENSPFOG00000003578	snrnp48	82	46.853	ENSPVAG00000002854	SNRNP48	75	49.412	Pteropus_vampyrus
ENSPFOG00000003578	snrnp48	92	76.582	ENSPNYG00000015399	snrnp48	89	77.338	Pundamilia_nyererei
ENSPFOG00000003578	snrnp48	93	45.562	ENSRNOG00000013756	Snrnp48	75	50.781	Rattus_norvegicus
ENSPFOG00000003578	snrnp48	80	49.291	ENSRBIG00000043856	SNRNP48	88	50.179	Rhinopithecus_bieti
ENSPFOG00000003578	snrnp48	81	45.399	ENSRROG00000043229	SNRNP48	73	52.590	Rhinopithecus_roxellana
ENSPFOG00000003578	snrnp48	81	46.012	ENSSBOG00000019486	SNRNP48	73	52.988	Saimiri_boliviensis_boliviensis
ENSPFOG00000003578	snrnp48	81	47.973	ENSSHAG00000014483	SNRNP48	80	48.763	Sarcophilus_harrisii
ENSPFOG00000003578	snrnp48	73	62.745	ENSSFOG00015006610	snrnp48	67	60.351	Scleropages_formosus
ENSPFOG00000003578	snrnp48	95	74.312	ENSSDUG00000014953	snrnp48	95	74.312	Seriola_dumerili
ENSPFOG00000003578	snrnp48	95	73.860	ENSSLDG00000005989	snrnp48	95	73.860	Seriola_lalandi_dorsalis
ENSPFOG00000003578	snrnp48	75	50.558	ENSSPUG00000006257	SNRNP48	60	53.991	Sphenodon_punctatus
ENSPFOG00000003578	snrnp48	96	76.758	ENSSPAG00000006454	snrnp48	95	77.301	Stegastes_partitus
ENSPFOG00000003578	snrnp48	79	48.763	ENSTGUG00000007575	SNRNP48	68	56.075	Taeniopygia_guttata
ENSPFOG00000003578	snrnp48	74	72.266	ENSTRUG00000007031	snrnp48	86	67.931	Takifugu_rubripes
ENSPFOG00000003578	snrnp48	98	65.774	ENSTNIG00000012977	-	82	69.597	Tetraodon_nigroviridis
ENSPFOG00000003578	snrnp48	73	48.828	ENSTBEG00000015620	SNRNP48	75	49.219	Tupaia_belangeri
ENSPFOG00000003578	snrnp48	85	44.479	ENSTTRG00000016715	SNRNP48	73	50.403	Tursiops_truncatus
ENSPFOG00000003578	snrnp48	92	44.681	ENSUAMG00000003690	SNRNP48	72	50.607	Ursus_americanus
ENSPFOG00000003578	snrnp48	59	54.634	ENSVPAG00000003557	SNRNP48	70	54.634	Vicugna_pacos
ENSPFOG00000003578	snrnp48	92	44.444	ENSVVUG00000004996	SNRNP48	72	50.403	Vulpes_vulpes
ENSPFOG00000003578	snrnp48	83	47.751	ENSXETG00000020447	snrnp48	77	49.811	Xenopus_tropicalis
ENSPFOG00000003578	snrnp48	95	86.810	ENSXCOG00000004478	snrnp48	95	86.810	Xiphophorus_couchianus
ENSPFOG00000003578	snrnp48	95	96.012	ENSXMAG00000013595	snrnp48	95	96.012	Xiphophorus_maculatus