EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000003653 (Gene tree)
Gene ID: 103145569
Gene Symbol: zgc:114130
Alias: -
Full Name: zinc finger protein 36%2C C3H1 type-like 1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 6976 bases
Position: chrKI519754.1:521067-528042
Accession: 103145569
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000028496	zf-CCCH	PF00642.24	1.5e-20	1	2
ENSPFOP00000028496	zf-CCCH	PF00642.24	1.5e-20	2	2
ENSPFOP00000003503	zf-CCCH	PF00642.24	2.1e-20	1	2
ENSPFOP00000003503	zf-CCCH	PF00642.24	2.1e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000028403	-	1038	-	ENSPFOP00000028496	345 (aa)	-	A0A096MAQ5
ENSPFOT00000003509	-	4002	-	ENSPFOP00000003503	433 (aa)	XP_007563108	A0A087XCK0

Gene Model

Click here to download ENSPFOG00000003653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000003653's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000003653	zgc:114130	100	68.481	ENSAPOG00000014912	zgc:114130	98	68.707	Acanthochromis_polyacanthus
ENSPFOG00000003653	zgc:114130	99	66.197	ENSACIG00000017364	zgc:114130	96	67.606	Amphilophus_citrinellus
ENSPFOG00000003653	zgc:114130	100	67.800	ENSAOCG00000022227	zgc:114130	98	67.574	Amphiprion_ocellaris
ENSPFOG00000003653	zgc:114130	100	67.574	ENSAPEG00000015497	zgc:114130	98	67.347	Amphiprion_percula
ENSPFOG00000003653	zgc:114130	100	67.760	ENSATEG00000008781	zgc:114130	98	65.837	Anabas_testudineus
ENSPFOG00000003653	zgc:114130	100	66.017	ENSACLG00000022113	zgc:114130	98	65.297	Astatotilapia_calliptera
ENSPFOG00000003653	zgc:114130	74	38.209	ENSAMXG00000034874	sb:cb81	73	36.607	Astyanax_mexicanus
ENSPFOG00000003653	zgc:114130	100	45.799	ENSAMXG00000038581	zgc:114130	95	43.016	Astyanax_mexicanus
ENSPFOG00000003653	zgc:114130	100	59.417	ENSCSEG00000018290	zgc:114130	98	60.135	Cynoglossus_semilaevis
ENSPFOG00000003653	zgc:114130	100	78.753	ENSCVAG00000018574	zgc:114130	100	77.367	Cyprinodon_variegatus
ENSPFOG00000003653	zgc:114130	99	35.909	ENSDARG00000040503	sb:cb81	99	35.056	Danio_rerio
ENSPFOG00000003653	zgc:114130	100	45.169	ENSDARG00000040725	zgc:114130	96	44.595	Danio_rerio
ENSPFOG00000003653	zgc:114130	99	38.136	ENSELUG00000013045	sb:cb81	74	36.283	Esox_lucius
ENSPFOG00000003653	zgc:114130	99	50.575	ENSELUG00000013151	zgc:114130	97	46.050	Esox_lucius
ENSPFOG00000003653	zgc:114130	100	75.632	ENSFHEG00000000656	zgc:114130	100	76.552	Fundulus_heteroclitus
ENSPFOG00000003653	zgc:114130	93	54.908	ENSGMOG00000017223	zgc:114130	99	56.135	Gadus_morhua
ENSPFOG00000003653	zgc:114130	98	91.150	ENSGAFG00000009949	zgc:114130	94	89.676	Gambusia_affinis
ENSPFOG00000003653	zgc:114130	93	70.497	ENSGACG00000008344	zgc:114130	99	69.350	Gasterosteus_aculeatus
ENSPFOG00000003653	zgc:114130	100	66.295	ENSHBUG00000015051	zgc:114130	98	65.982	Haplochromis_burtoni
ENSPFOG00000003653	zgc:114130	100	62.011	ENSHCOG00000015800	zgc:114130	96	55.631	Hippocampus_comes
ENSPFOG00000003653	zgc:114130	100	46.132	ENSIPUG00000018256	zgc:114130	79	39.908	Ictalurus_punctatus
ENSPFOG00000003653	zgc:114130	100	68.767	ENSKMAG00000019287	zgc:114130	98	67.191	Kryptolebias_marmoratus
ENSPFOG00000003653	zgc:114130	100	63.812	ENSLBEG00000018387	zgc:114130	98	61.048	Labrus_bergylta
ENSPFOG00000003653	zgc:114130	99	36.219	ENSLACG00000015732	sb:cb81	99	34.932	Latimeria_chalumnae
ENSPFOG00000003653	zgc:114130	76	36.000	ENSLOCG00000014587	sb:cb81	77	36.872	Lepisosteus_oculatus
ENSPFOG00000003653	zgc:114130	100	67.131	ENSMAMG00000007511	zgc:114130	96	64.450	Mastacembelus_armatus
ENSPFOG00000003653	zgc:114130	59	39.033	ENSMAMG00000007516	zgc:162730	58	39.493	Mastacembelus_armatus
ENSPFOG00000003653	zgc:114130	100	66.295	ENSMZEG00005014410	zgc:114130	98	65.525	Maylandia_zebra
ENSPFOG00000003653	zgc:114130	51	47.475	ENSMZEG00005016001	-	60	44.981	Maylandia_zebra
ENSPFOG00000003653	zgc:114130	100	68.768	ENSMMOG00000011504	zgc:114130	96	69.628	Mola_mola
ENSPFOG00000003653	zgc:114130	66	66.667	ENSMALG00000021140	-	96	68.421	Monopterus_albus
ENSPFOG00000003653	zgc:114130	94	67.378	ENSNBRG00000013703	zgc:114130	94	66.768	Neolamprologus_brichardi
ENSPFOG00000003653	zgc:114130	93	67.683	ENSONIG00000005004	zgc:114130	99	68.389	Oreochromis_niloticus
ENSPFOG00000003653	zgc:114130	77	47.037	ENSONIG00000001259	sb:cb81	60	45.353	Oreochromis_niloticus
ENSPFOG00000003653	zgc:114130	54	44.737	ENSONIG00000005003	zgc:162730	67	41.739	Oreochromis_niloticus
ENSPFOG00000003653	zgc:114130	78	43.431	ENSOCUG00000003168	ZFP36L1	66	39.493	Oryctolagus_cuniculus
ENSPFOG00000003653	zgc:114130	100	98.383	ENSPLAG00000000947	zgc:114130	100	98.383	Poecilia_latipinna
ENSPFOG00000003653	zgc:114130	100	97.460	ENSPMEG00000015335	zgc:114130	100	97.460	Poecilia_mexicana
ENSPFOG00000003653	zgc:114130	100	94.457	ENSPREG00000021254	zgc:114130	100	93.533	Poecilia_reticulata
ENSPFOG00000003653	zgc:114130	100	66.760	ENSPNYG00000015546	zgc:114130	98	64.612	Pundamilia_nyererei
ENSPFOG00000003653	zgc:114130	100	39.785	ENSPNAG00000023029	zgc:114130	96	39.741	Pygocentrus_nattereri
ENSPFOG00000003653	zgc:114130	99	35.099	ENSPNAG00000030063	sb:cb81	75	34.402	Pygocentrus_nattereri
ENSPFOG00000003653	zgc:114130	77	39.777	ENSSFOG00015003179	sb:cb81	99	31.020	Scleropages_formosus
ENSPFOG00000003653	zgc:114130	100	65.565	ENSSMAG00000018621	zgc:114130	95	63.492	Scophthalmus_maximus
ENSPFOG00000003653	zgc:114130	100	71.038	ENSSDUG00000002237	zgc:114130	100	66.444	Seriola_dumerili
ENSPFOG00000003653	zgc:114130	100	70.685	ENSSLDG00000008496	zgc:114130	100	66.222	Seriola_lalandi_dorsalis
ENSPFOG00000003653	zgc:114130	100	69.178	ENSSPAG00000006856	zgc:114130	98	68.721	Stegastes_partitus
ENSPFOG00000003653	zgc:114130	99	61.433	ENSTRUG00000022473	zgc:114130	98	59.184	Takifugu_rubripes
ENSPFOG00000003653	zgc:114130	99	77.843	ENSXCOG00000012792	zgc:114130	96	75.573	Xiphophorus_couchianus
ENSPFOG00000003653	zgc:114130	100	93.995	ENSXMAG00000026836	zgc:114130	100	93.072	Xiphophorus_maculatus