EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000003924 (Gene tree)
Gene ID: 103143460
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 2982 bases
Position: chrKI519722.1:1243090-1246071
Accession: 103143460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000024026	GTP_EFTU	PF00009.27	2.3e-53	1	1
ENSPFOP00000003894	GTP_EFTU	PF00009.27	1.7e-38	1	1
ENSPFOP00000024026	GTP_EFTU_D2	PF03144.25	2.9e-15	1	1
ENSPFOP00000003894	GTP_EFTU_D2	PF03144.25	3.8e-15	1	1
ENSPFOP00000003894	GTP_EFTU_D3	PF03143.17	2.2e-42	1	1
ENSPFOP00000024026	GTP_EFTU_D3	PF03143.17	2.7e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000003902	-	2560	-	ENSPFOP00000003894	413 (aa)	-	A0A087XDP1
ENSPFOT00000022614	-	1784	XM_007560018	ENSPFOP00000024026	466 (aa)	XP_007560080	A0A096LXY5

Gene Model

Click here to download ENSPFOG00000003924's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000003924's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000003924	-	94	38.952	ENSPFOG00000016035	gspt1l	74	38.952
ENSPFOG00000003924	-	100	88.647	ENSPFOG00000003782	-	97	90.402
ENSPFOG00000003924	-	94	42.105	ENSPFOG00000021764	hbs1l	60	42.105
ENSPFOG00000003924	-	80	31.414	ENSPFOG00000007043	tufm	84	31.414
ENSPFOG00000003924	-	94	38.322	ENSPFOG00000005224	-	71	38.375
ENSPFOG00000003924	-	100	66.828	ENSPFOG00000013173	si:dkey-37o8.1	98	68.233
ENSPFOG00000003924	-	100	86.232	ENSPFOG00000013175	eef1a1b	98	87.611
ENSPFOG00000003924	-	99	86.797	ENSPFOG00000004725	eef1a1b	98	87.389

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000003924	-	98	92.556	ENSAPOG00000004714	-	98	93.348	Acanthochromis_polyacanthus
ENSPFOG00000003924	-	100	93.947	ENSACIG00000001219	-	97	94.045	Amphilophus_citrinellus
ENSPFOG00000003924	-	100	89.588	ENSAOCG00000022039	-	98	90.466	Amphiprion_ocellaris
ENSPFOG00000003924	-	98	94.789	ENSAOCG00000022002	-	98	94.789	Amphiprion_ocellaris
ENSPFOG00000003924	-	100	90.315	ENSAPEG00000016361	-	98	91.131	Amphiprion_percula
ENSPFOG00000003924	-	98	95.833	ENSATEG00000003244	-	96	95.833	Anabas_testudineus
ENSPFOG00000003924	-	100	93.705	ENSACLG00000022560	-	98	94.457	Astatotilapia_calliptera
ENSPFOG00000003924	-	99	82.251	WBGene00001168	eef-1A.1	98	82.743	Caenorhabditis_elegans
ENSPFOG00000003924	-	99	82.251	WBGene00001169	eef-1A.2	98	82.743	Caenorhabditis_elegans
ENSPFOG00000003924	-	98	84.498	ENSCING00000021478	-	98	85.078	Ciona_intestinalis
ENSPFOG00000003924	-	99	77.825	ENSCING00000007703	-	98	77.996	Ciona_intestinalis
ENSPFOG00000003924	-	97	80.617	ENSCING00000018894	-	97	80.617	Ciona_intestinalis
ENSPFOG00000003924	-	98	80.590	ENSCING00000005126	-	98	81.319	Ciona_intestinalis
ENSPFOG00000003924	-	98	84.683	ENSCSAVG00000006357	-	96	94.000	Ciona_savignyi
ENSPFOG00000003924	-	98	81.034	ENSCSAVG00000009663	-	98	81.978	Ciona_savignyi
ENSPFOG00000003924	-	99	75.000	ENSCSAVG00000001085	-	89	76.906	Ciona_savignyi
ENSPFOG00000003924	-	98	80.196	ENSCSAVG00000003196	-	98	80.828	Ciona_savignyi
ENSPFOG00000003924	-	99	85.680	ENSCSEG00000007992	-	97	85.856	Cynoglossus_semilaevis
ENSPFOG00000003924	-	100	85.749	ENSCSEG00000007972	-	98	86.139	Cynoglossus_semilaevis
ENSPFOG00000003924	-	98	95.037	ENSCSEG00000008011	-	98	95.344	Cynoglossus_semilaevis
ENSPFOG00000003924	-	100	98.305	ENSCVAG00000019356	-	100	98.482	Cyprinodon_variegatus
ENSPFOG00000003924	-	100	85.990	FBgn0284245	eEF1alpha1	97	87.277	Drosophila_melanogaster
ENSPFOG00000003924	-	98	84.653	FBgn0000557	eEF1alpha2	98	85.619	Drosophila_melanogaster
ENSPFOG00000003924	-	99	82.609	ENSEBUG00000015814	-	98	83.149	Eptatretus_burgeri
ENSPFOG00000003924	-	100	97.579	ENSFHEG00000015054	-	100	97.831	Fundulus_heteroclitus
ENSPFOG00000003924	-	100	99.758	ENSGAFG00000014646	-	100	99.783	Gambusia_affinis
ENSPFOG00000003924	-	98	95.285	ENSGACG00000002182	-	98	95.565	Gasterosteus_aculeatus
ENSPFOG00000003924	-	100	92.978	ENSGACG00000002143	-	98	93.792	Gasterosteus_aculeatus
ENSPFOG00000003924	-	62	91.406	ENSHBUG00000017166	-	92	91.463	Haplochromis_burtoni
ENSPFOG00000003924	-	99	85.033	ENSHCOG00000008489	-	97	85.268	Hippocampus_comes
ENSPFOG00000003924	-	98	95.285	ENSHCOG00000008468	-	98	95.344	Hippocampus_comes
ENSPFOG00000003924	-	98	94.045	ENSLBEG00000002759	-	98	94.457	Labrus_bergylta
ENSPFOG00000003924	-	99	84.348	ENSLBEG00000002955	-	98	84.479	Labrus_bergylta
ENSPFOG00000003924	-	100	96.852	ENSMAMG00000007715	-	100	97.180	Mastacembelus_armatus
ENSPFOG00000003924	-	99	75.430	ENSMMOG00000018160	-	95	86.957	Mola_mola
ENSPFOG00000003924	-	99	85.870	ENSMMOG00000001106	-	98	86.253	Mola_mola
ENSPFOG00000003924	-	98	92.060	ENSMMOG00000001165	-	100	94.444	Mola_mola
ENSPFOG00000003924	-	99	83.117	ENSNBRG00000017346	-	97	82.965	Neolamprologus_brichardi
ENSPFOG00000003924	-	77	91.317	ENSONIG00000017760	-	99	91.317	Oreochromis_niloticus
ENSPFOG00000003924	-	100	97.094	ENSORLG00000007614	eef1a	100	97.180	Oryzias_latipes
ENSPFOG00000003924	-	100	97.094	ENSORLG00015002397	-	100	97.180	Oryzias_latipes_hsok
ENSPFOG00000003924	-	100	98.063	ENSOMEG00000018226	-	100	98.265	Oryzias_melastigma
ENSPFOG00000003924	-	98	49.015	ENSPMGG00000022427	-	97	60.000	Periophthalmus_magnuspinnatus
ENSPFOG00000003924	-	98	94.059	ENSPMGG00000023911	-	100	97.674	Periophthalmus_magnuspinnatus
ENSPFOG00000003924	-	100	100.000	ENSPLAG00000004316	-	100	100.000	Poecilia_latipinna
ENSPFOG00000003924	-	100	99.758	ENSPMEG00000001010	-	100	99.783	Poecilia_mexicana
ENSPFOG00000003924	-	100	99.516	ENSPREG00000008243	-	100	99.349	Poecilia_reticulata
ENSPFOG00000003924	-	100	93.705	ENSPNYG00000007263	-	98	94.457	Pundamilia_nyererei
ENSPFOG00000003924	-	95	81.124	YPR080W	TEF1	98	80.488	Saccharomyces_cerevisiae
ENSPFOG00000003924	-	95	81.124	YBR118W	TEF2	98	80.488	Saccharomyces_cerevisiae
ENSPFOG00000003924	-	59	93.033	ENSSMAG00000016277	-	96	93.033	Scophthalmus_maximus
ENSPFOG00000003924	-	97	83.510	ENSSMAG00000018469	-	98	83.510	Scophthalmus_maximus
ENSPFOG00000003924	-	98	95.533	ENSSDUG00000008198	-	98	95.787	Seriola_dumerili
ENSPFOG00000003924	-	98	93.797	ENSSPAG00000001710	-	98	93.570	Stegastes_partitus
ENSPFOG00000003924	-	98	95.285	ENSTRUG00000005727	ef-1a	98	95.565	Takifugu_rubripes
ENSPFOG00000003924	-	99	85.870	ENSTRUG00000005066	-	98	86.253	Takifugu_rubripes
ENSPFOG00000003924	-	99	81.957	ENSTNIG00000002617	-	94	83.742	Tetraodon_nigroviridis
ENSPFOG00000003924	-	98	94.293	ENSTNIG00000002619	-	98	94.678	Tetraodon_nigroviridis
ENSPFOG00000003924	-	100	100.000	ENSXCOG00000001542	-	100	100.000	Xiphophorus_couchianus