EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPFOG00000003987 (Gene tree)
Gene ID
103139620
Gene Symbol
rpa1
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Poecilia_formosa
Status
putative
Strand
Plus strand
Length
27857 bases
Position
chrKI519673.1:156521-184377
Accession
103139620
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPFOP00000004158tRNA_anti-codonPF01336.252.4e-1211
ENSPFOP00000023576tRNA_anti-codonPF01336.252.5e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPFOT00000004166-2783XM_007554344ENSPFOP00000004158600 (aa)XP_007554406A0A087XEF5
ENSPFOT00000024151-2798-ENSPFOP00000023576605 (aa)-A0A096LWN5
Gene Model
Click here to download ENSPFOG00000003987's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000003987's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPFOG00000003987rpa18957.581ENSPFOG00000012234RPA19957.751
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPFOG00000003987rpa19962.624ENSAPOG00000019409RPA18069.816Acanthochromis_polyacanthus
ENSPFOG00000003987rpa19984.667ENSAPOG00000011658rpa19984.667Acanthochromis_polyacanthus
ENSPFOG00000003987rpa19962.726ENSAMEG00000007706RPA19862.726Ailuropoda_melanoleuca
ENSPFOG00000003987rpa19676.562ENSACIG00000007277rpa19976.562Amphilophus_citrinellus
ENSPFOG00000003987rpa19562.351ENSACIG00000012881RPA19962.351Amphilophus_citrinellus
ENSPFOG00000003987rpa19983.306ENSAOCG00000023376rpa19983.306Amphiprion_ocellaris
ENSPFOG00000003987rpa19959.105ENSAOCG00000009003RPA19959.259Amphiprion_ocellaris
ENSPFOG00000003987rpa19957.768ENSAPEG00000019132RPA19957.768Amphiprion_percula
ENSPFOG00000003987rpa19983.472ENSAPEG00000008634rpa19983.472Amphiprion_percula
ENSPFOG00000003987rpa19582.662ENSATEG00000022024rpa110082.662Anabas_testudineus
ENSPFOG00000003987rpa19959.692ENSATEG00000006443RPA19959.692Anabas_testudineus
ENSPFOG00000003987rpa19755.572ENSAPLG00000012442RPA19955.572Anas_platyrhynchos
ENSPFOG00000003987rpa19956.423ENSACAG00000014490RPA19856.911Anolis_carolinensis
ENSPFOG00000003987rpa19664.516ENSANAG00000023456RPA19864.516Aotus_nancymaae
ENSPFOG00000003987rpa19962.047ENSACLG00000005223RPA19962.047Astatotilapia_calliptera
ENSPFOG00000003987rpa19484.369ENSACLG00000006640rpa19984.369Astatotilapia_calliptera
ENSPFOG00000003987rpa19976.744ENSAMXG00000008418rpa19977.205Astyanax_mexicanus
ENSPFOG00000003987rpa19961.789ENSBTAG00000009711RPA19961.789Bos_taurus
ENSPFOG00000003987rpa17132.488WBGene00017546rpa-16532.488Caenorhabditis_elegans
ENSPFOG00000003987rpa19961.765ENSCJAG00000001848RPA19962.520Callithrix_jacchus
ENSPFOG00000003987rpa19962.459ENSCAFG00000019249RPA19962.787Canis_familiaris
ENSPFOG00000003987rpa19962.459ENSCAFG00020009847RPA19962.787Canis_lupus_dingo
ENSPFOG00000003987rpa19961.526ENSCHIG00000026308RPA19961.889Capra_hircus
ENSPFOG00000003987rpa19962.029ENSTSYG00000003482-9962.029Carlito_syrichta
ENSPFOG00000003987rpa19963.322ENSCPOG00000000035RPA19963.322Cavia_porcellus
ENSPFOG00000003987rpa19951.961ENSCCAG00000010981RPA19952.700Cebus_capucinus
ENSPFOG00000003987rpa19962.829ENSCLAG00000005185-9962.829Chinchilla_lanigera
ENSPFOG00000003987rpa19958.814ENSCLAG00000015045-9858.814Chinchilla_lanigera
ENSPFOG00000003987rpa19952.864ENSCSAG00000013833RPA19953.191Chlorocebus_sabaeus
ENSPFOG00000003987rpa19562.393ENSCHOG00000013540-9962.393Choloepus_hoffmanni
ENSPFOG00000003987rpa17270.439ENSCHOG00000009454-9970.439Choloepus_hoffmanni
ENSPFOG00000003987rpa19963.875ENSCPBG00000020377RPA19964.727Chrysemys_picta_bellii
ENSPFOG00000003987rpa19943.234ENSCING00000023482-9943.234Ciona_intestinalis
ENSPFOG00000003987rpa19762.755ENSCANG00000030911RPA19962.755Colobus_angolensis_palliatus
ENSPFOG00000003987rpa19962.175ENSCGRG00001008197Rpa19962.175Cricetulus_griseus_chok1gshd
ENSPFOG00000003987rpa18164.427ENSCGRG00000000582Rpa19964.427Cricetulus_griseus_crigri
ENSPFOG00000003987rpa19955.449ENSCSEG00000012726RPA19957.045Cynoglossus_semilaevis
ENSPFOG00000003987rpa110079.242ENSCSEG00000013066rpa110079.242Cynoglossus_semilaevis
ENSPFOG00000003987rpa19067.139ENSCVAG00000013446-9655.452Cyprinodon_variegatus
ENSPFOG00000003987rpa110090.115ENSCVAG00000019431rpa110090.280Cyprinodon_variegatus
ENSPFOG00000003987rpa19974.624ENSDARG00000003938rpa19974.624Danio_rerio
ENSPFOG00000003987rpa19863.079ENSDNOG00000017218RPA19863.079Dasypus_novemcinctus
ENSPFOG00000003987rpa19962.908ENSDORG00000006199Rpa19962.908Dipodomys_ordii
ENSPFOG00000003987rpa19942.741FBgn0010173RpA-709943.770Drosophila_melanogaster
ENSPFOG00000003987rpa18274.468ENSETEG00000017608RPA18174.468Echinops_telfairi
ENSPFOG00000003987rpa19664.334ENSEASG00005009372RPA19863.588Equus_asinus_asinus
ENSPFOG00000003987rpa19962.890ENSECAG00000023886RPA19962.890Equus_caballus
ENSPFOG00000003987rpa17070.406ENSEEUG00000002186-6870.406Erinaceus_europaeus
ENSPFOG00000003987rpa19978.607ENSELUG00000021071rpa19978.607Esox_lucius
ENSPFOG00000003987rpa18861.338ENSELUG00000006136RPA19961.338Esox_lucius
ENSPFOG00000003987rpa19962.480ENSFCAG00000006306RPA19962.480Felis_catus
ENSPFOG00000003987rpa19963.591ENSFALG00000006575RPA19863.591Ficedula_albicollis
ENSPFOG00000003987rpa19962.993ENSFDAG00000007720RPA19962.993Fukomys_damarensis
ENSPFOG00000003987rpa110090.248ENSFHEG00000003580rpa110090.248Fundulus_heteroclitus
ENSPFOG00000003987rpa19976.174ENSGMOG00000010382rpa19976.174Gadus_morhua
ENSPFOG00000003987rpa19962.086ENSGALG00000003072RPA19862.086Gallus_gallus
ENSPFOG00000003987rpa19958.040ENSGAFG00000020953RPA19957.492Gambusia_affinis
ENSPFOG00000003987rpa110096.333ENSGAFG00000012916rpa110096.333Gambusia_affinis
ENSPFOG00000003987rpa110080.929ENSGACG00000010856rpa110080.929Gasterosteus_aculeatus
ENSPFOG00000003987rpa19963.218ENSGAGG00000013611RPA19963.218Gopherus_agassizii
ENSPFOG00000003987rpa19963.333ENSGGOG00000014186RPA19963.333Gorilla_gorilla
ENSPFOG00000003987rpa19986.833ENSHBUG00000017773rpa19986.833Haplochromis_burtoni
ENSPFOG00000003987rpa19557.439ENSHBUG00000009348RPA19857.439Haplochromis_burtoni
ENSPFOG00000003987rpa19962.623ENSHGLG00000008846RPA19962.664Heterocephalus_glaber_female
ENSPFOG00000003987rpa19958.882ENSHGLG00100000799-9858.882Heterocephalus_glaber_male
ENSPFOG00000003987rpa19953.038ENSHGLG00100002005-9952.769Heterocephalus_glaber_male
ENSPFOG00000003987rpa19962.623ENSHGLG00100017755-9962.664Heterocephalus_glaber_male
ENSPFOG00000003987rpa19446.316ENSHCOG00000000351RPA19246.316Hippocampus_comes
ENSPFOG00000003987rpa110074.715ENSHCOG00000001401rpa110074.551Hippocampus_comes
ENSPFOG00000003987rpa19975.124ENSIPUG00000004400rpa19975.124Ictalurus_punctatus
ENSPFOG00000003987rpa19162.500ENSSTOG00000022475RPA19562.500Ictidomys_tridecemlineatus
ENSPFOG00000003987rpa19663.898ENSJJAG00000000876Rpa19863.898Jaculus_jaculus
ENSPFOG00000003987rpa110080.719ENSKMAG00000005605rpa110081.240Kryptolebias_marmoratus
ENSPFOG00000003987rpa19960.496ENSKMAG00000000234RPA19960.496Kryptolebias_marmoratus
ENSPFOG00000003987rpa19967.489ENSLBEG00000002281RPA18767.489Labrus_bergylta
ENSPFOG00000003987rpa19981.623ENSLBEG00000021604rpa19981.623Labrus_bergylta
ENSPFOG00000003987rpa18161.200ENSLACG00000007210RPA19961.200Latimeria_chalumnae
ENSPFOG00000003987rpa19971.786ENSLOCG00000006397rpa19971.786Lepisosteus_oculatus
ENSPFOG00000003987rpa19961.327ENSLAFG00000015354RPA19961.327Loxodonta_africana
ENSPFOG00000003987rpa18060.404ENSMFAG00000036138-9860.808Macaca_fascicularis
ENSPFOG00000003987rpa19957.756ENSMMUG00000002442-9957.756Macaca_mulatta
ENSPFOG00000003987rpa19663.328ENSMMUG00000011604-9763.667Macaca_mulatta
ENSPFOG00000003987rpa19954.620ENSMNEG00000029837-9665.188Macaca_nemestrina
ENSPFOG00000003987rpa19562.969ENSMNEG00000031632-9863.311Macaca_nemestrina
ENSPFOG00000003987rpa19659.898ENSMLEG00000038768-9760.237Mandrillus_leucophaeus
ENSPFOG00000003987rpa19268.837ENSMAMG00000020097RPA19957.186Mastacembelus_armatus
ENSPFOG00000003987rpa110084.526ENSMAMG00000017993rpa110084.526Mastacembelus_armatus
ENSPFOG00000003987rpa19986.500ENSMZEG00005007551rpa19986.500Maylandia_zebra
ENSPFOG00000003987rpa19962.047ENSMZEG00005024731RPA19962.047Maylandia_zebra
ENSPFOG00000003987rpa19861.398ENSMGAG00000005315RPA19861.398Meleagris_gallopavo
ENSPFOG00000003987rpa19663.898ENSMAUG00000010474Rpa19864.068Mesocricetus_auratus
ENSPFOG00000003987rpa19962.643ENSMICG00000012867RPA19963.295Microcebus_murinus
ENSPFOG00000003987rpa19962.397ENSMOCG00000013019Rpa19962.397Microtus_ochrogaster
ENSPFOG00000003987rpa19861.500ENSMMOG00000010868RPA19861.500Mola_mola
ENSPFOG00000003987rpa110080.200ENSMMOG00000014292rpa110082.616Mola_mola
ENSPFOG00000003987rpa19962.193ENSMODG00000010549RPA19962.193Monodelphis_domestica
ENSPFOG00000003987rpa110085.524ENSMALG00000011453rpa110085.524Monopterus_albus
ENSPFOG00000003987rpa19962.725ENSMALG00000001208RPA19562.725Monopterus_albus
ENSPFOG00000003987rpa19962.052MGP_CAROLIEiJ_G0016734Rpa19962.052Mus_caroli
ENSPFOG00000003987rpa19961.452ENSMUSG00000000751Rpa19961.452Mus_musculus
ENSPFOG00000003987rpa19962.359MGP_PahariEiJ_G0017871Rpa19962.399Mus_pahari
ENSPFOG00000003987rpa19961.353MGP_SPRETEiJ_G0017577Rpa19961.353Mus_spretus
ENSPFOG00000003987rpa19962.745ENSMPUG00000013119RPA19962.745Mustela_putorius_furo
ENSPFOG00000003987rpa19663.300ENSMLUG00000006113RPA19563.300Myotis_lucifugus
ENSPFOG00000003987rpa19563.481ENSNGAG00000004522Rpa19363.481Nannospalax_galili
ENSPFOG00000003987rpa19860.403ENSNBRG00000009672RPA19760.403Neolamprologus_brichardi
ENSPFOG00000003987rpa19584.007ENSNBRG00000020595rpa19984.007Neolamprologus_brichardi
ENSPFOG00000003987rpa19962.969ENSNLEG00000017149RPA19963.399Nomascus_leucogenys
ENSPFOG00000003987rpa19654.484ENSMEUG00000006714RPA19754.484Notamacropus_eugenii
ENSPFOG00000003987rpa19561.953ENSODEG00000009038RPA19661.953Octodon_degus
ENSPFOG00000003987rpa19985.131ENSONIG00000013135rpa19985.131Oreochromis_niloticus
ENSPFOG00000003987rpa19863.245ENSOANG00000010880RPA19963.576Ornithorhynchus_anatinus
ENSPFOG00000003987rpa19960.559ENSOCUG00000001504RPA19960.559Oryctolagus_cuniculus
ENSPFOG00000003987rpa19955.914ENSORLG00000003368RPA19955.914Oryzias_latipes
ENSPFOG00000003987rpa19984.281ENSORLG00000004856rpa19984.281Oryzias_latipes
ENSPFOG00000003987rpa19166.977ENSORLG00020015284RPA19953.394Oryzias_latipes_hni
ENSPFOG00000003987rpa19984.615ENSORLG00020008980rpa19984.615Oryzias_latipes_hni
ENSPFOG00000003987rpa19984.615ENSORLG00015013982rpa19984.615Oryzias_latipes_hsok
ENSPFOG00000003987rpa16965.217ENSORLG00015005867-9565.217Oryzias_latipes_hsok
ENSPFOG00000003987rpa19956.964ENSORLG00015020383RPA19956.964Oryzias_latipes_hsok
ENSPFOG00000003987rpa19559.059ENSOMEG00000011040RPA19959.059Oryzias_melastigma
ENSPFOG00000003987rpa19981.636ENSOMEG00000004704rpa19981.636Oryzias_melastigma
ENSPFOG00000003987rpa19962.745ENSOGAG00000005581-9962.745Otolemur_garnettii
ENSPFOG00000003987rpa17575.419ENSOGAG00000029379-9875.419Otolemur_garnettii
ENSPFOG00000003987rpa19961.750ENSOARG00000014479RPA19962.114Ovis_aries
ENSPFOG00000003987rpa19963.458ENSPPAG00000039680RPA19963.889Pan_paniscus
ENSPFOG00000003987rpa19962.623ENSPPRG00000011807RPA19862.623Panthera_pardus
ENSPFOG00000003987rpa19962.316ENSPTIG00000007898RPA19962.316Panthera_tigris_altaica
ENSPFOG00000003987rpa19963.622ENSPTRG00000008539RPA19964.052Pan_troglodytes
ENSPFOG00000003987rpa19962.357ENSPANG00000024592RPA19962.684Papio_anubis
ENSPFOG00000003987rpa19475.965ENSPKIG00000008053rpa19376.316Paramormyrops_kingsleyae
ENSPFOG00000003987rpa19664.346ENSPSIG00000015617RPA19764.346Pelodiscus_sinensis
ENSPFOG00000003987rpa19977.129ENSPMGG00000011589rpa19879.581Periophthalmus_magnuspinnatus
ENSPFOG00000003987rpa19760.171ENSPMGG00000000543RPA19962.657Periophthalmus_magnuspinnatus
ENSPFOG00000003987rpa19963.458ENSPEMG00000021061Rpa19963.458Peromyscus_maniculatus_bairdii
ENSPFOG00000003987rpa19961.827ENSPCIG00000019049RPA19961.866Phascolarctos_cinereus
ENSPFOG00000003987rpa19458.604ENSPLAG00000008844-9758.604Poecilia_latipinna
ENSPFOG00000003987rpa110099.500ENSPLAG00000004984rpa110099.500Poecilia_latipinna
ENSPFOG00000003987rpa19458.117ENSPMEG00000003627-9658.117Poecilia_mexicana
ENSPFOG00000003987rpa110099.833ENSPMEG00000020602rpa110099.833Poecilia_mexicana
ENSPFOG00000003987rpa19388.372ENSPREG00000010174rpa19588.372Poecilia_reticulata
ENSPFOG00000003987rpa19269.037ENSPREG00000010119RPA19956.101Poecilia_reticulata
ENSPFOG00000003987rpa19962.745ENSPCOG00000001799RPA19962.745Propithecus_coquereli
ENSPFOG00000003987rpa19961.928ENSPVAG00000002149RPA19961.928Pteropus_vampyrus
ENSPFOG00000003987rpa19961.890ENSPNYG00000024165RPA19961.890Pundamilia_nyererei
ENSPFOG00000003987rpa19986.833ENSPNYG00000016316rpa19986.833Pundamilia_nyererei
ENSPFOG00000003987rpa19967.953ENSPNAG00000008599rpa19669.459Pygocentrus_nattereri
ENSPFOG00000003987rpa19670.244ENSRNOG00000003123Rpa19963.011Rattus_norvegicus
ENSPFOG00000003987rpa19962.684ENSRBIG00000036587RPA19962.684Rhinopithecus_bieti
ENSPFOG00000003987rpa19957.774ENSRROG00000043278RPA19957.774Rhinopithecus_roxellana
ENSPFOG00000003987rpa19432.021YAR007CRFA19332.021Saccharomyces_cerevisiae
ENSPFOG00000003987rpa19064.568ENSSBOG00000030233RPA19665.171Saimiri_boliviensis_boliviensis
ENSPFOG00000003987rpa19663.131ENSSHAG00000007969RPA19563.912Sarcophilus_harrisii
ENSPFOG00000003987rpa19978.073ENSSFOG00015005362rpa19278.073Scleropages_formosus
ENSPFOG00000003987rpa19956.079ENSSMAG00000019746RPA19956.079Scophthalmus_maximus
ENSPFOG00000003987rpa110085.191ENSSDUG00000011949rpa110085.191Seriola_dumerili
ENSPFOG00000003987rpa19270.370ENSSDUG00000016358RPA19263.600Seriola_dumerili
ENSPFOG00000003987rpa110085.358ENSSLDG00000011806rpa110085.358Seriola_lalandi_dorsalis
ENSPFOG00000003987rpa19963.200ENSSLDG00000020784RPA19363.200Seriola_lalandi_dorsalis
ENSPFOG00000003987rpa18678.788ENSSARG00000007506RPA18778.788Sorex_araneus
ENSPFOG00000003987rpa19762.373ENSSPUG00000007223RPA19862.373Sphenodon_punctatus
ENSPFOG00000003987rpa110084.526ENSSPAG00000009903rpa110084.526Stegastes_partitus
ENSPFOG00000003987rpa19863.283ENSSPAG00000011165RPA19863.283Stegastes_partitus
ENSPFOG00000003987rpa19961.093ENSSSCG00000017822RPA19862.838Sus_scrofa
ENSPFOG00000003987rpa19962.914ENSTGUG00000005775RPA19862.914Taeniopygia_guttata
ENSPFOG00000003987rpa19980.435ENSTRUG00000003616rpa19980.435Takifugu_rubripes
ENSPFOG00000003987rpa19968.925ENSTRUG00000000405RPA19968.736Takifugu_rubripes
ENSPFOG00000003987rpa110082.680ENSTNIG00000016199rpa19982.787Tetraodon_nigroviridis
ENSPFOG00000003987rpa17370.227ENSTBEG00000002709RPA17470.227Tupaia_belangeri
ENSPFOG00000003987rpa19961.526ENSTTRG00000001169RPA19961.889Tursiops_truncatus
ENSPFOG00000003987rpa18671.154ENSUAMG00000015676RPA19571.154Ursus_americanus
ENSPFOG00000003987rpa19962.333ENSUMAG00000009328RPA19963.054Ursus_maritimus
ENSPFOG00000003987rpa19960.000ENSVPAG00000009443RPA19960.000Vicugna_pacos
ENSPFOG00000003987rpa19962.131ENSVVUG00000021715RPA19962.459Vulpes_vulpes
ENSPFOG00000003987rpa19966.611ENSXETG00000013538rpa19966.998Xenopus_tropicalis
ENSPFOG00000003987rpa19561.257ENSXCOG00000009899-9961.257Xiphophorus_couchianus
ENSPFOG00000003987rpa19394.444ENSXCOG00000010068rpa19494.444Xiphophorus_couchianus
ENSPFOG00000003987rpa19368.807ENSXMAG00000010333RPA18168.807Xiphophorus_maculatus
ENSPFOG00000003987rpa110095.500ENSXMAG00000004102rpa110095.520Xiphophorus_maculatus

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