EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000004096 (Gene tree)
Gene ID: 103155160
Gene Symbol: si:ch73-63e15.2
Alias: -
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 68585 bases
Position: chrKI520025.1:12398-80982
Accession: 103155160
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000021755	ResIII	PF04851.15	1.1e-08	1	1
ENSPFOP00000004808	ResIII	PF04851.15	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000022745	-	8779	-	ENSPFOP00000021755	1147 (aa)	-	A0A096LRG4
ENSPFOT00000004817	-	8767	XM_007576730	ENSPFOP00000004808	1580 (aa)	XP_007576789	A0A087XGA5

Gene Model

Click here to download ENSPFOG00000004096's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000004096's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000004096	si:ch73-63e15.2	83	63.946	ENSPFOG00000005069	sbno1	78	57.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000004096	si:ch73-63e15.2	99	68.783	ENSG00000064932	SBNO2	87	68.788	Homo_sapiens
ENSPFOG00000004096	si:ch73-63e15.2	100	88.525	ENSAPOG00000003185	si:ch73-63e15.2	93	85.952	Acanthochromis_polyacanthus
ENSPFOG00000004096	si:ch73-63e15.2	100	88.956	ENSAOCG00000016581	si:ch73-63e15.2	98	84.321	Amphiprion_ocellaris
ENSPFOG00000004096	si:ch73-63e15.2	100	89.042	ENSAPEG00000008862	si:ch73-63e15.2	100	79.683	Amphiprion_percula
ENSPFOG00000004096	si:ch73-63e15.2	100	87.629	ENSATEG00000023838	si:ch73-63e15.2	99	83.525	Anabas_testudineus
ENSPFOG00000004096	si:ch73-63e15.2	99	72.010	ENSAPLG00000007158	SBNO2	89	72.357	Anas_platyrhynchos
ENSPFOG00000004096	si:ch73-63e15.2	99	67.680	ENSANAG00000026685	SBNO2	88	67.913	Aotus_nancymaae
ENSPFOG00000004096	si:ch73-63e15.2	100	85.665	ENSACLG00000005090	si:ch73-63e15.2	100	76.220	Astatotilapia_calliptera
ENSPFOG00000004096	si:ch73-63e15.2	99	79.634	ENSAMXG00000015881	si:ch73-63e15.2	84	81.006	Astyanax_mexicanus
ENSPFOG00000004096	si:ch73-63e15.2	100	78.157	ENSAMXG00000018868	sbno2a	96	79.876	Astyanax_mexicanus
ENSPFOG00000004096	si:ch73-63e15.2	99	69.278	ENSBTAG00000020780	SBNO2	88	69.637	Bos_taurus
ENSPFOG00000004096	si:ch73-63e15.2	99	69.085	ENSCAFG00000019543	SBNO2	90	66.427	Canis_familiaris
ENSPFOG00000004096	si:ch73-63e15.2	99	69.085	ENSCAFG00020017115	SBNO2	95	66.427	Canis_lupus_dingo
ENSPFOG00000004096	si:ch73-63e15.2	99	69.124	ENSCHIG00000026127	SBNO2	90	66.269	Capra_hircus
ENSPFOG00000004096	si:ch73-63e15.2	99	65.915	ENSCAPG00000005731	SBNO2	94	66.696	Cavia_aperea
ENSPFOG00000004096	si:ch73-63e15.2	99	65.891	ENSCPOG00000007477	SBNO2	87	66.695	Cavia_porcellus
ENSPFOG00000004096	si:ch73-63e15.2	99	67.448	ENSCCAG00000037518	SBNO2	88	67.941	Cebus_capucinus
ENSPFOG00000004096	si:ch73-63e15.2	99	68.534	ENSCATG00000037046	SBNO2	87	68.897	Cercocebus_atys
ENSPFOG00000004096	si:ch73-63e15.2	99	68.087	ENSCLAG00000010178	SBNO2	99	68.963	Chinchilla_lanigera
ENSPFOG00000004096	si:ch73-63e15.2	99	68.534	ENSCSAG00000012317	SBNO2	90	64.900	Chlorocebus_sabaeus
ENSPFOG00000004096	si:ch73-63e15.2	99	70.322	ENSCPBG00000008920	SBNO2	78	84.634	Chrysemys_picta_bellii
ENSPFOG00000004096	si:ch73-63e15.2	95	68.564	ENSCANG00000036745	SBNO2	95	68.944	Colobus_angolensis_palliatus
ENSPFOG00000004096	si:ch73-63e15.2	99	66.377	ENSCGRG00001023960	Sbno2	85	67.098	Cricetulus_griseus_chok1gshd
ENSPFOG00000004096	si:ch73-63e15.2	99	67.708	ENSCGRG00000011984	Sbno2	85	68.421	Cricetulus_griseus_crigri
ENSPFOG00000004096	si:ch73-63e15.2	99	85.928	ENSCSEG00000006856	si:ch73-63e15.2	96	88.440	Cynoglossus_semilaevis
ENSPFOG00000004096	si:ch73-63e15.2	100	90.652	ENSCVAG00000005663	si:ch73-63e15.2	100	83.385	Cyprinodon_variegatus
ENSPFOG00000004096	si:ch73-63e15.2	99	78.740	ENSDARG00000016188	SBNO2	98	67.540	Danio_rerio
ENSPFOG00000004096	si:ch73-63e15.2	100	77.405	ENSDARG00000098801	sbno2a	91	75.556	Danio_rerio
ENSPFOG00000004096	si:ch73-63e15.2	99	68.240	ENSDORG00000002916	Sbno2	90	66.104	Dipodomys_ordii
ENSPFOG00000004096	si:ch73-63e15.2	99	68.874	ENSEASG00005021621	SBNO2	88	69.939	Equus_asinus_asinus
ENSPFOG00000004096	si:ch73-63e15.2	99	68.874	ENSECAG00000011827	SBNO2	88	70.026	Equus_caballus
ENSPFOG00000004096	si:ch73-63e15.2	99	84.596	ENSELUG00000020457	si:ch73-63e15.2	99	72.195	Esox_lucius
ENSPFOG00000004096	si:ch73-63e15.2	99	71.564	ENSFALG00000013988	SBNO2	92	67.559	Ficedula_albicollis
ENSPFOG00000004096	si:ch73-63e15.2	97	66.460	ENSFDAG00000015186	SBNO2	86	66.812	Fukomys_damarensis
ENSPFOG00000004096	si:ch73-63e15.2	100	90.768	ENSFHEG00000022262	si:ch73-63e15.2	100	84.469	Fundulus_heteroclitus
ENSPFOG00000004096	si:ch73-63e15.2	99	83.975	ENSGMOG00000007542	si:ch73-63e15.2	95	85.977	Gadus_morhua
ENSPFOG00000004096	si:ch73-63e15.2	99	71.993	ENSGALG00000037522	SBNO2	84	72.137	Gallus_gallus
ENSPFOG00000004096	si:ch73-63e15.2	100	94.664	ENSGAFG00000004860	si:ch73-63e15.2	93	98.721	Gambusia_affinis
ENSPFOG00000004096	si:ch73-63e15.2	99	87.358	ENSGACG00000013190	si:ch73-63e15.2	96	88.342	Gasterosteus_aculeatus
ENSPFOG00000004096	si:ch73-63e15.2	99	73.040	ENSGAGG00000008348	SBNO2	85	72.782	Gopherus_agassizii
ENSPFOG00000004096	si:ch73-63e15.2	100	85.825	ENSHBUG00000010742	si:ch73-63e15.2	100	76.658	Haplochromis_burtoni
ENSPFOG00000004096	si:ch73-63e15.2	99	67.848	ENSHGLG00000008739	SBNO2	85	68.621	Heterocephalus_glaber_female
ENSPFOG00000004096	si:ch73-63e15.2	99	67.558	ENSHGLG00100005269	SBNO2	99	68.750	Heterocephalus_glaber_male
ENSPFOG00000004096	si:ch73-63e15.2	99	85.664	ENSHCOG00000000884	si:ch73-63e15.2	96	79.573	Hippocampus_comes
ENSPFOG00000004096	si:ch73-63e15.2	99	78.602	ENSIPUG00000000537	si:ch73-63e15.2	87	79.325	Ictalurus_punctatus
ENSPFOG00000004096	si:ch73-63e15.2	100	79.588	ENSIPUG00000019672	sbno2	99	75.262	Ictalurus_punctatus
ENSPFOG00000004096	si:ch73-63e15.2	99	67.645	ENSSTOG00000025832	SBNO2	88	67.328	Ictidomys_tridecemlineatus
ENSPFOG00000004096	si:ch73-63e15.2	99	65.523	ENSJJAG00000017397	Sbno2	91	63.259	Jaculus_jaculus
ENSPFOG00000004096	si:ch73-63e15.2	100	87.381	ENSKMAG00000005541	si:ch73-63e15.2	100	78.229	Kryptolebias_marmoratus
ENSPFOG00000004096	si:ch73-63e15.2	56	79.160	ENSLBEG00000005937	-	100	81.970	Labrus_bergylta
ENSPFOG00000004096	si:ch73-63e15.2	99	87.696	ENSLBEG00000025016	si:ch73-63e15.2	99	88.571	Labrus_bergylta
ENSPFOG00000004096	si:ch73-63e15.2	58	66.715	ENSLACG00000012598	SBNO2	99	73.105	Latimeria_chalumnae
ENSPFOG00000004096	si:ch73-63e15.2	99	82.840	ENSLOCG00000004643	si:ch73-63e15.2	87	82.502	Lepisosteus_oculatus
ENSPFOG00000004096	si:ch73-63e15.2	99	64.858	ENSLAFG00000008824	SBNO2	89	65.412	Loxodonta_africana
ENSPFOG00000004096	si:ch73-63e15.2	99	67.097	ENSMFAG00000040030	SBNO2	89	67.361	Macaca_fascicularis
ENSPFOG00000004096	si:ch73-63e15.2	99	68.534	ENSMMUG00000010886	SBNO2	89	66.185	Macaca_mulatta
ENSPFOG00000004096	si:ch73-63e15.2	99	68.621	ENSMNEG00000039927	SBNO2	87	68.983	Macaca_nemestrina
ENSPFOG00000004096	si:ch73-63e15.2	92	69.065	ENSMLEG00000038556	SBNO2	97	65.108	Mandrillus_leucophaeus
ENSPFOG00000004096	si:ch73-63e15.2	100	87.392	ENSMAMG00000018758	si:ch73-63e15.2	100	76.332	Mastacembelus_armatus
ENSPFOG00000004096	si:ch73-63e15.2	100	85.739	ENSMZEG00005010682	si:ch73-63e15.2	100	76.082	Maylandia_zebra
ENSPFOG00000004096	si:ch73-63e15.2	99	70.976	ENSMGAG00000003801	SBNO2	90	71.734	Meleagris_gallopavo
ENSPFOG00000004096	si:ch73-63e15.2	99	67.524	ENSMAUG00000008034	Sbno2	88	67.026	Mesocricetus_auratus
ENSPFOG00000004096	si:ch73-63e15.2	99	68.139	ENSMICG00000013071	SBNO2	88	68.458	Microcebus_murinus
ENSPFOG00000004096	si:ch73-63e15.2	99	67.941	ENSMOCG00000010504	Sbno2	88	66.474	Microtus_ochrogaster
ENSPFOG00000004096	si:ch73-63e15.2	99	70.649	ENSMODG00000005382	SBNO2	89	67.115	Monodelphis_domestica
ENSPFOG00000004096	si:ch73-63e15.2	82	81.693	ENSMALG00000021831	si:ch73-63e15.2	99	79.877	Monopterus_albus
ENSPFOG00000004096	si:ch73-63e15.2	99	67.301	ENSMUSG00000035673	Sbno2	97	66.226	Mus_musculus
ENSPFOG00000004096	si:ch73-63e15.2	99	67.153	MGP_PahariEiJ_G0030976	Sbno2	88	66.474	Mus_pahari
ENSPFOG00000004096	si:ch73-63e15.2	99	67.386	MGP_SPRETEiJ_G0016381	Sbno2	94	66.309	Mus_spretus
ENSPFOG00000004096	si:ch73-63e15.2	85	70.641	ENSMPUG00000008747	SBNO2	95	69.187	Mustela_putorius_furo
ENSPFOG00000004096	si:ch73-63e15.2	99	67.591	ENSNGAG00000004308	Sbno2	86	67.876	Nannospalax_galili
ENSPFOG00000004096	si:ch73-63e15.2	96	84.919	ENSNBRG00000022968	si:ch73-63e15.2	99	89.261	Neolamprologus_brichardi
ENSPFOG00000004096	si:ch73-63e15.2	92	69.740	ENSNLEG00000001305	SBNO2	89	69.740	Nomascus_leucogenys
ENSPFOG00000004096	si:ch73-63e15.2	82	65.789	ENSMEUG00000013511	-	78	66.702	Notamacropus_eugenii
ENSPFOG00000004096	si:ch73-63e15.2	96	68.360	ENSOPRG00000017238	SBNO2	94	68.439	Ochotona_princeps
ENSPFOG00000004096	si:ch73-63e15.2	99	67.593	ENSODEG00000011822	SBNO2	89	65.787	Octodon_degus
ENSPFOG00000004096	si:ch73-63e15.2	100	86.340	ENSONIG00000002490	si:ch73-63e15.2	94	87.871	Oreochromis_niloticus
ENSPFOG00000004096	si:ch73-63e15.2	99	86.844	ENSORLG00000000913	si:ch73-63e15.2	99	76.115	Oryzias_latipes
ENSPFOG00000004096	si:ch73-63e15.2	99	86.758	ENSORLG00020010978	si:ch73-63e15.2	100	75.548	Oryzias_latipes_hni
ENSPFOG00000004096	si:ch73-63e15.2	99	86.844	ENSORLG00015000202	si:ch73-63e15.2	100	75.596	Oryzias_latipes_hsok
ENSPFOG00000004096	si:ch73-63e15.2	100	86.530	ENSOMEG00000000359	si:ch73-63e15.2	100	76.074	Oryzias_melastigma
ENSPFOG00000004096	si:ch73-63e15.2	99	66.150	ENSOARG00000011130	SBNO2	90	65.017	Ovis_aries
ENSPFOG00000004096	si:ch73-63e15.2	99	67.179	ENSPPAG00000032482	SBNO2	90	67.873	Pan_paniscus
ENSPFOG00000004096	si:ch73-63e15.2	99	68.398	ENSPTRG00000010185	SBNO2	88	68.793	Pan_troglodytes
ENSPFOG00000004096	si:ch73-63e15.2	99	66.261	ENSPANG00000009658	SBNO2	87	66.608	Papio_anubis
ENSPFOG00000004096	si:ch73-63e15.2	99	81.622	ENSPKIG00000024201	si:ch73-63e15.2	84	83.348	Paramormyrops_kingsleyae
ENSPFOG00000004096	si:ch73-63e15.2	91	76.515	ENSPKIG00000009707	-	84	79.034	Paramormyrops_kingsleyae
ENSPFOG00000004096	si:ch73-63e15.2	84	72.663	ENSPSIG00000002852	SBNO2	99	73.529	Pelodiscus_sinensis
ENSPFOG00000004096	si:ch73-63e15.2	99	85.639	ENSPMGG00000014375	si:ch73-63e15.2	96	78.495	Periophthalmus_magnuspinnatus
ENSPFOG00000004096	si:ch73-63e15.2	99	66.146	ENSPEMG00000024122	Sbno2	85	66.870	Peromyscus_maniculatus_bairdii
ENSPFOG00000004096	si:ch73-63e15.2	99	70.345	ENSPCIG00000011264	SBNO2	89	67.329	Phascolarctos_cinereus
ENSPFOG00000004096	si:ch73-63e15.2	100	95.611	ENSPLAG00000014653	si:ch73-63e15.2	100	99.540	Poecilia_latipinna
ENSPFOG00000004096	si:ch73-63e15.2	100	99.494	ENSPMEG00000002129	si:ch73-63e15.2	100	99.494	Poecilia_mexicana
ENSPFOG00000004096	si:ch73-63e15.2	100	97.977	ENSPREG00000006755	si:ch73-63e15.2	100	97.977	Poecilia_reticulata
ENSPFOG00000004096	si:ch73-63e15.2	93	67.709	ENSPCAG00000012256	SBNO2	80	67.709	Procavia_capensis
ENSPFOG00000004096	si:ch73-63e15.2	99	62.403	ENSPCOG00000015216	SBNO2	90	59.920	Propithecus_coquereli
ENSPFOG00000004096	si:ch73-63e15.2	100	85.739	ENSPNYG00000019926	si:ch73-63e15.2	100	76.658	Pundamilia_nyererei
ENSPFOG00000004096	si:ch73-63e15.2	99	79.688	ENSPNAG00000020260	si:ch73-63e15.2	85	80.900	Pygocentrus_nattereri
ENSPFOG00000004096	si:ch73-63e15.2	100	79.138	ENSPNAG00000026609	sbno2a	99	69.697	Pygocentrus_nattereri
ENSPFOG00000004096	si:ch73-63e15.2	99	67.972	ENSRNOG00000013987	Sbno2	89	68.930	Rattus_norvegicus
ENSPFOG00000004096	si:ch73-63e15.2	92	67.537	ENSRBIG00000009740	SBNO2	86	67.514	Rhinopithecus_bieti
ENSPFOG00000004096	si:ch73-63e15.2	87	71.429	ENSRROG00000044671	SBNO2	85	71.551	Rhinopithecus_roxellana
ENSPFOG00000004096	si:ch73-63e15.2	99	67.507	ENSSBOG00000023562	SBNO2	88	68.202	Saimiri_boliviensis_boliviensis
ENSPFOG00000004096	si:ch73-63e15.2	97	70.914	ENSSHAG00000010241	SBNO2	97	71.201	Sarcophilus_harrisii
ENSPFOG00000004096	si:ch73-63e15.2	98	81.200	ENSSFOG00015005861	si:ch73-63e15.2	97	79.851	Scleropages_formosus
ENSPFOG00000004096	si:ch73-63e15.2	100	87.639	ENSSMAG00000012489	si:ch73-63e15.2	100	77.160	Scophthalmus_maximus
ENSPFOG00000004096	si:ch73-63e15.2	100	87.910	ENSSDUG00000003527	si:ch73-63e15.2	100	77.785	Seriola_dumerili
ENSPFOG00000004096	si:ch73-63e15.2	100	87.801	ENSSLDG00000004623	si:ch73-63e15.2	100	77.663	Seriola_lalandi_dorsalis
ENSPFOG00000004096	si:ch73-63e15.2	99	89.064	ENSSPAG00000017717	si:ch73-63e15.2	99	79.948	Stegastes_partitus
ENSPFOG00000004096	si:ch73-63e15.2	99	68.957	ENSSSCG00000030042	SBNO2	89	69.264	Sus_scrofa
ENSPFOG00000004096	si:ch73-63e15.2	96	87.996	ENSTRUG00000018193	si:ch73-63e15.2	86	87.996	Takifugu_rubripes
ENSPFOG00000004096	si:ch73-63e15.2	91	69.896	ENSUAMG00000006568	SBNO2	91	78.604	Ursus_americanus
ENSPFOG00000004096	si:ch73-63e15.2	99	69.171	ENSVVUG00000022823	SBNO2	89	66.427	Vulpes_vulpes
ENSPFOG00000004096	si:ch73-63e15.2	90	66.667	ENSXETG00000021579	sbno2	91	76.566	Xenopus_tropicalis
ENSPFOG00000004096	si:ch73-63e15.2	85	95.440	ENSXCOG00000009209	si:ch73-63e15.2	94	93.875	Xiphophorus_couchianus
ENSPFOG00000004096	si:ch73-63e15.2	100	96.207	ENSXMAG00000012091	si:ch73-63e15.2	100	96.213	Xiphophorus_maculatus