EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000004097 (Gene tree)
Gene ID: 103144531
Gene Symbol: hnrnph1
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 11629 bases
Position: chrKI519738.1:1070249-1081877
Accession: 103144531
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000023550	zf-RNPHF	PF08080.12	5.7e-09	1	1
ENSPFOP00000004035	zf-RNPHF	PF08080.12	7.3e-09	1	1
ENSPFOP00000023550	RRM_1	PF00076.22	9.4e-32	1	3
ENSPFOP00000023550	RRM_1	PF00076.22	9.4e-32	2	3
ENSPFOP00000023550	RRM_1	PF00076.22	9.4e-32	3	3
ENSPFOP00000004035	RRM_1	PF00076.22	1e-31	1	3
ENSPFOP00000004035	RRM_1	PF00076.22	1e-31	2	3
ENSPFOP00000004035	RRM_1	PF00076.22	1e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000004043	-	6019	-	ENSPFOP00000004035	406 (aa)	XP_007561628	A0A087XE32
ENSPFOT00000022362	-	1453	-	ENSPFOP00000023550	406 (aa)	-	A0A096LWK9

Gene Model

Click here to download ENSPFOG00000004097's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000004097's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000004097	hnrnph1	94	59.677	ENSPFOG00000015322	HNRNPH3	92	58.760
ENSPFOG00000004097	hnrnph1	81	41.390	ENSPFOG00000006122	grsf1	77	41.718
ENSPFOG00000004097	hnrnph1	80	36.232	ENSPFOG00000023551	rbm12	70	36.232

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000004097	hnrnph1	100	97.543	ENSAPOG00000016614	hnrnph1	100	97.543	Acanthochromis_polyacanthus
ENSPFOG00000004097	hnrnph1	99	97.606	ENSACIG00000008964	hnrnph1	99	96.606	Amphilophus_citrinellus
ENSPFOG00000004097	hnrnph1	100	98.034	ENSAOCG00000008372	hnrnph1	100	98.034	Amphiprion_ocellaris
ENSPFOG00000004097	hnrnph1	100	97.789	ENSAPEG00000012980	hnrnph1	100	97.789	Amphiprion_percula
ENSPFOG00000004097	hnrnph1	100	97.789	ENSATEG00000002792	hnrnph1	100	97.789	Anabas_testudineus
ENSPFOG00000004097	hnrnph1	99	71.145	ENSACAG00000016323	-	80	80.217	Anolis_carolinensis
ENSPFOG00000004097	hnrnph1	84	94.930	ENSACLG00000003313	hnrnph1	97	94.930	Astatotilapia_calliptera
ENSPFOG00000004097	hnrnph1	99	82.801	ENSAMXG00000030703	hnrnph1l	84	82.310	Astyanax_mexicanus
ENSPFOG00000004097	hnrnph1	100	83.252	ENSAMXG00000002483	hnrnph1	100	87.306	Astyanax_mexicanus
ENSPFOG00000004097	hnrnph1	100	93.888	ENSCSEG00000015891	hnrnph1	100	95.110	Cynoglossus_semilaevis
ENSPFOG00000004097	hnrnph1	100	97.291	ENSCVAG00000014097	hnrnph1	100	97.291	Cyprinodon_variegatus
ENSPFOG00000004097	hnrnph1	100	82.885	ENSDARG00000040881	hnrnph1	100	83.374	Danio_rerio
ENSPFOG00000004097	hnrnph1	95	88.432	ENSDARG00000005551	hnrnph1l	99	85.995	Danio_rerio
ENSPFOG00000004097	hnrnph1	100	86.019	ENSELUG00000006715	hnrnph1	98	86.735	Esox_lucius
ENSPFOG00000004097	hnrnph1	96	84.474	ENSELUG00000021437	-	99	87.105	Esox_lucius
ENSPFOG00000004097	hnrnph1	100	95.320	ENSFHEG00000008474	hnrnph1	100	94.089	Fundulus_heteroclitus
ENSPFOG00000004097	hnrnph1	96	87.715	ENSGMOG00000006782	hnrnph1	100	87.715	Gadus_morhua
ENSPFOG00000004097	hnrnph1	100	99.507	ENSGAFG00000006280	hnrnph1	100	99.507	Gambusia_affinis
ENSPFOG00000004097	hnrnph1	100	90.909	ENSGACG00000018352	hnrnph1	99	89.563	Gasterosteus_aculeatus
ENSPFOG00000004097	hnrnph1	84	94.930	ENSHBUG00000010547	hnrnph1	98	94.930	Haplochromis_burtoni
ENSPFOG00000004097	hnrnph1	100	84.561	ENSHCOG00000004513	hnrnph1	100	88.124	Hippocampus_comes
ENSPFOG00000004097	hnrnph1	95	83.290	ENSIPUG00000024047	hnrnph1l	96	81.081	Ictalurus_punctatus
ENSPFOG00000004097	hnrnph1	100	81.311	ENSIPUG00000018262	hnrnph1	100	84.223	Ictalurus_punctatus
ENSPFOG00000004097	hnrnph1	100	95.355	ENSKMAG00000018802	hnrnph1	100	95.110	Kryptolebias_marmoratus
ENSPFOG00000004097	hnrnph1	100	96.314	ENSLBEG00000027811	hnrnph1	100	96.314	Labrus_bergylta
ENSPFOG00000004097	hnrnph1	96	80.760	ENSLOCG00000012510	hnrnph1	91	82.630	Lepisosteus_oculatus
ENSPFOG00000004097	hnrnph1	99	54.147	ENSMMUG00000017392	-	83	57.221	Macaca_mulatta
ENSPFOG00000004097	hnrnph1	99	53.881	ENSMNEG00000030544	-	83	57.221	Macaca_nemestrina
ENSPFOG00000004097	hnrnph1	87	90.667	ENSMAMG00000011478	hnrnph1	99	91.398	Mastacembelus_armatus
ENSPFOG00000004097	hnrnph1	100	98.522	ENSMZEG00005009791	hnrnph1	100	98.522	Maylandia_zebra
ENSPFOG00000004097	hnrnph1	95	93.059	ENSMMOG00000009064	hnrnph1	100	92.802	Mola_mola
ENSPFOG00000004097	hnrnph1	75	51.183	ENSMODG00000002200	-	99	51.045	Monodelphis_domestica
ENSPFOG00000004097	hnrnph1	85	94.708	ENSMALG00000003999	hnrnph1	99	94.708	Monopterus_albus
ENSPFOG00000004097	hnrnph1	84	94.930	ENSNBRG00000015406	hnrnph1	98	94.930	Neolamprologus_brichardi
ENSPFOG00000004097	hnrnph1	100	98.522	ENSONIG00000017754	hnrnph1	100	98.522	Oreochromis_niloticus
ENSPFOG00000004097	hnrnph1	100	95.884	ENSORLG00000006932	hnrnph1	100	95.884	Oryzias_latipes
ENSPFOG00000004097	hnrnph1	100	95.884	ENSORLG00020007881	hnrnph1	100	95.884	Oryzias_latipes_hni
ENSPFOG00000004097	hnrnph1	100	95.884	ENSORLG00015005306	hnrnph1	100	95.884	Oryzias_latipes_hsok
ENSPFOG00000004097	hnrnph1	100	98.039	ENSOMEG00000009827	hnrnph1	100	98.039	Oryzias_melastigma
ENSPFOG00000004097	hnrnph1	100	88.020	ENSPKIG00000018203	hnrnph1l	100	86.308	Paramormyrops_kingsleyae
ENSPFOG00000004097	hnrnph1	93	82.090	ENSPKIG00000009532	-	97	80.397	Paramormyrops_kingsleyae
ENSPFOG00000004097	hnrnph1	100	92.629	ENSPMGG00000012151	hnrnph1	100	93.612	Periophthalmus_magnuspinnatus
ENSPFOG00000004097	hnrnph1	100	100.000	ENSPLAG00000011771	hnrnph1	100	100.000	Poecilia_latipinna
ENSPFOG00000004097	hnrnph1	100	99.754	ENSPMEG00000019446	hnrnph1	100	99.754	Poecilia_mexicana
ENSPFOG00000004097	hnrnph1	100	99.261	ENSPREG00000005780	hnrnph1	100	99.261	Poecilia_reticulata
ENSPFOG00000004097	hnrnph1	100	98.522	ENSPNYG00000000204	hnrnph1	100	98.522	Pundamilia_nyererei
ENSPFOG00000004097	hnrnph1	99	83.619	ENSPNAG00000002784	hnrnph1l	99	82.555	Pygocentrus_nattereri
ENSPFOG00000004097	hnrnph1	100	82.767	ENSPNAG00000000439	hnrnph1	100	84.951	Pygocentrus_nattereri
ENSPFOG00000004097	hnrnph1	98	90.250	ENSSFOG00015022796	hnrnph1l	100	88.312	Scleropages_formosus
ENSPFOG00000004097	hnrnph1	95	89.231	ENSSFOG00015016055	-	94	89.501	Scleropages_formosus
ENSPFOG00000004097	hnrnph1	96	90.932	ENSSMAG00000007820	hnrnph1	97	92.821	Scophthalmus_maximus
ENSPFOG00000004097	hnrnph1	100	98.034	ENSSDUG00000008785	hnrnph1	100	98.034	Seriola_dumerili
ENSPFOG00000004097	hnrnph1	100	98.034	ENSSLDG00000010685	hnrnph1	100	98.034	Seriola_lalandi_dorsalis
ENSPFOG00000004097	hnrnph1	100	97.297	ENSSPAG00000009921	hnrnph1	100	97.297	Stegastes_partitus
ENSPFOG00000004097	hnrnph1	100	95.813	ENSTRUG00000020069	hnrnph1	100	95.813	Takifugu_rubripes
ENSPFOG00000004097	hnrnph1	99	72.624	ENSXETG00000018321	hnrnph1	85	78.976	Xenopus_tropicalis
ENSPFOG00000004097	hnrnph1	97	93.612	ENSXCOG00000009133	hnrnph1	100	93.612	Xiphophorus_couchianus
ENSPFOG00000004097	hnrnph1	95	98.438	ENSXMAG00000021332	hnrnph1	100	98.438	Xiphophorus_maculatus