EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000004135 (Gene tree)
Gene ID: 103140748
Gene Symbol: -
Alias: -
Full Name: zinc finger CCCH-type containing 12D
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 10476 bases
Position: chrKI519685.1:480182-490657
Accession: 103140748
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000003981	RNase_Zc3h12a	PF11977.8	3e-63	1	1
ENSPFOP00000021680	RNase_Zc3h12a	PF11977.8	3e-63	1	1
ENSPFOP00000022627	RNase_Zc3h12a	PF11977.8	3e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000003989	-	2190	XM_007556021	ENSPFOP00000003981	539 (aa)	XP_007556083	A0A087XDX8
ENSPFOT00000025631	-	2346	XM_016673394	ENSPFOP00000021680	539 (aa)	XP_016528880	A0A087XDX8
ENSPFOT00000023623	-	2838	-	ENSPFOP00000022627	539 (aa)	-	A0A087XDX8

Gene Model

Click here to download ENSPFOG00000004135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000004135's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000004135	-	73	36.341	ENSPFOG00000002933	si:dkey-206d17.12	99	36.585

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000004135	-	53	62.199	ENSG00000163874	ZC3H12A	78	60.811	Homo_sapiens
ENSPFOG00000004135	-	100	70.105	ENSAPOG00000005848	-	96	71.353	Acanthochromis_polyacanthus
ENSPFOG00000004135	-	53	61.484	ENSAPOG00000001632	-	57	61.484	Acanthochromis_polyacanthus
ENSPFOG00000004135	-	61	55.294	ENSAMEG00000000991	ZC3H12A	91	41.536	Ailuropoda_melanoleuca
ENSPFOG00000004135	-	99	40.838	ENSACIG00000004135	si:dkey-206d17.12	80	54.585	Amphilophus_citrinellus
ENSPFOG00000004135	-	99	38.978	ENSACIG00000017750	zc3h12a	98	39.165	Amphilophus_citrinellus
ENSPFOG00000004135	-	99	68.959	ENSACIG00000006790	-	92	82.877	Amphilophus_citrinellus
ENSPFOG00000004135	-	100	70.123	ENSAOCG00000009106	-	96	71.353	Amphiprion_ocellaris
ENSPFOG00000004135	-	54	58.958	ENSAOCG00000003866	-	87	56.067	Amphiprion_ocellaris
ENSPFOG00000004135	-	100	70.299	ENSAPEG00000004229	-	96	71.529	Amphiprion_percula
ENSPFOG00000004135	-	54	58.958	ENSAPEG00000005727	-	94	47.468	Amphiprion_percula
ENSPFOG00000004135	-	53	59.667	ENSATEG00000002260	-	83	57.322	Anabas_testudineus
ENSPFOG00000004135	-	99	66.376	ENSATEG00000013053	-	81	87.054	Anabas_testudineus
ENSPFOG00000004135	-	99	38.540	ENSATEG00000006140	si:dkey-206d17.12	85	42.953	Anabas_testudineus
ENSPFOG00000004135	-	53	59.797	ENSACAG00000017285	ZC3H12A	92	40.517	Anolis_carolinensis
ENSPFOG00000004135	-	53	62.329	ENSANAG00000009908	ZC3H12A	78	60.090	Aotus_nancymaae
ENSPFOG00000004135	-	99	67.951	ENSACLG00000018534	-	94	67.951	Astatotilapia_calliptera
ENSPFOG00000004135	-	99	51.658	ENSAMXG00000030754	-	99	51.483	Astyanax_mexicanus
ENSPFOG00000004135	-	54	61.074	ENSBTAG00000011316	ZC3H12A	51	61.074	Bos_taurus
ENSPFOG00000004135	-	53	60.339	ENSCAFG00000003304	ZC3H12A	51	60.339	Canis_familiaris
ENSPFOG00000004135	-	53	60.339	ENSCAFG00020008620	ZC3H12A	51	60.339	Canis_lupus_dingo
ENSPFOG00000004135	-	54	60.738	ENSCHIG00000021957	ZC3H12A	94	42.059	Capra_hircus
ENSPFOG00000004135	-	53	61.724	ENSCAPG00000015365	ZC3H12A	99	41.404	Cavia_aperea
ENSPFOG00000004135	-	53	61.034	ENSCPOG00000011081	ZC3H12A	99	41.053	Cavia_porcellus
ENSPFOG00000004135	-	53	61.856	ENSCATG00000037700	ZC3H12A	78	59.459	Cercocebus_atys
ENSPFOG00000004135	-	53	61.856	ENSCSAG00000001106	ZC3H12A	91	42.683	Chlorocebus_sabaeus
ENSPFOG00000004135	-	53	62.199	ENSCANG00000042287	ZC3H12A	78	59.910	Colobus_angolensis_palliatus
ENSPFOG00000004135	-	54	59.355	ENSCSEG00000010073	-	81	55.144	Cynoglossus_semilaevis
ENSPFOG00000004135	-	98	81.495	ENSCVAG00000001077	-	99	80.935	Cyprinodon_variegatus
ENSPFOG00000004135	-	99	37.133	ENSCVAG00000001516	si:dkey-206d17.12	92	37.370	Cyprinodon_variegatus
ENSPFOG00000004135	-	52	60.351	ENSDARG00000005271	zc3h12a	78	60.825	Danio_rerio
ENSPFOG00000004135	-	55	58.553	ENSDNOG00000035006	ZC3H12A	92	41.125	Dasypus_novemcinctus
ENSPFOG00000004135	-	55	47.869	ENSETEG00000018311	ZC3H12A	61	47.869	Echinops_telfairi
ENSPFOG00000004135	-	53	60.825	ENSEASG00005012220	ZC3H12A	94	40.069	Equus_asinus_asinus
ENSPFOG00000004135	-	53	60.825	ENSECAG00000009562	ZC3H12A	89	40.838	Equus_caballus
ENSPFOG00000004135	-	51	60.498	ENSEEUG00000005907	ZC3H12A	99	41.588	Erinaceus_europaeus
ENSPFOG00000004135	-	96	53.716	ENSELUG00000018728	-	89	53.367	Esox_lucius
ENSPFOG00000004135	-	57	56.329	ENSELUG00000007368	si:dkey-206d17.12	50	56.646	Esox_lucius
ENSPFOG00000004135	-	53	60.825	ENSFDAG00000006446	ZC3H12A	92	40.354	Fukomys_damarensis
ENSPFOG00000004135	-	100	79.380	ENSFHEG00000011425	-	100	79.266	Fundulus_heteroclitus
ENSPFOG00000004135	-	99	39.469	ENSFHEG00000001174	si:dkey-206d17.12	93	39.469	Fundulus_heteroclitus
ENSPFOG00000004135	-	74	47.268	ENSFHEG00000021225	-	82	45.333	Fundulus_heteroclitus
ENSPFOG00000004135	-	99	37.913	ENSGMOG00000007388	-	99	39.024	Gadus_morhua
ENSPFOG00000004135	-	54	65.870	ENSGMOG00000014437	-	94	65.870	Gadus_morhua
ENSPFOG00000004135	-	54	53.020	ENSGMOG00000017603	si:dkey-206d17.12	61	53.020	Gadus_morhua
ENSPFOG00000004135	-	99	93.358	ENSGAFG00000009523	-	99	93.358	Gambusia_affinis
ENSPFOG00000004135	-	98	38.798	ENSGAFG00000019001	si:dkey-206d17.12	93	38.036	Gambusia_affinis
ENSPFOG00000004135	-	53	57.732	ENSGACG00000013859	zc3h12a	50	57.732	Gasterosteus_aculeatus
ENSPFOG00000004135	-	56	81.013	ENSGACG00000006636	-	99	81.013	Gasterosteus_aculeatus
ENSPFOG00000004135	-	54	56.478	ENSGACG00000002341	si:dkey-206d17.12	55	56.478	Gasterosteus_aculeatus
ENSPFOG00000004135	-	99	67.951	ENSHBUG00000021584	-	85	86.996	Haplochromis_burtoni
ENSPFOG00000004135	-	98	37.729	ENSHCOG00000004255	si:dkey-206d17.12	91	46.581	Hippocampus_comes
ENSPFOG00000004135	-	54	60.616	ENSHCOG00000008878	-	59	43.671	Hippocampus_comes
ENSPFOG00000004135	-	99	52.952	ENSIPUG00000011663	-	99	52.220	Ictalurus_punctatus
ENSPFOG00000004135	-	58	58.438	ENSJJAG00000004252	Zc3h12a	92	41.930	Jaculus_jaculus
ENSPFOG00000004135	-	100	68.694	ENSKMAG00000014401	-	100	68.336	Kryptolebias_marmoratus
ENSPFOG00000004135	-	99	62.153	ENSLBEG00000012121	-	99	62.738	Labrus_bergylta
ENSPFOG00000004135	-	87	40.625	ENSLBEG00000017593	si:dkey-206d17.12	75	40.625	Labrus_bergylta
ENSPFOG00000004135	-	54	59.150	ENSLBEG00000012554	-	87	46.250	Labrus_bergylta
ENSPFOG00000004135	-	100	42.142	ENSLACG00000017365	ZC3H12A	95	42.142	Latimeria_chalumnae
ENSPFOG00000004135	-	57	58.951	ENSLOCG00000003232	si:dkey-206d17.12	52	59.568	Lepisosteus_oculatus
ENSPFOG00000004135	-	100	51.636	ENSLOCG00000017000	-	100	52.007	Lepisosteus_oculatus
ENSPFOG00000004135	-	55	59.223	ENSLAFG00000018720	ZC3H12A	91	40.981	Loxodonta_africana
ENSPFOG00000004135	-	53	61.856	ENSMFAG00000032647	ZC3H12A	78	59.459	Macaca_fascicularis
ENSPFOG00000004135	-	53	61.856	ENSMMUG00000010323	ZC3H12A	91	42.509	Macaca_mulatta
ENSPFOG00000004135	-	53	61.856	ENSMNEG00000040453	ZC3H12A	78	59.459	Macaca_nemestrina
ENSPFOG00000004135	-	53	61.856	ENSMLEG00000034570	ZC3H12A	78	59.459	Mandrillus_leucophaeus
ENSPFOG00000004135	-	99	67.190	ENSMAMG00000004463	-	84	86.161	Mastacembelus_armatus
ENSPFOG00000004135	-	54	58.632	ENSMAMG00000021794	-	94	47.500	Mastacembelus_armatus
ENSPFOG00000004135	-	99	67.951	ENSMZEG00005015555	-	94	67.951	Maylandia_zebra
ENSPFOG00000004135	-	53	60.274	ENSMZEG00005019137	-	92	46.795	Maylandia_zebra
ENSPFOG00000004135	-	99	41.837	ENSMGAG00000003371	ZC3H12A	51	62.034	Meleagris_gallopavo
ENSPFOG00000004135	-	99	43.262	ENSMOCG00000001899	Zc3h12a	92	43.262	Microtus_ochrogaster
ENSPFOG00000004135	-	97	41.754	ENSMMOG00000000727	zc3h12a	94	42.218	Mola_mola
ENSPFOG00000004135	-	99	62.129	ENSMMOG00000014855	-	88	81.223	Mola_mola
ENSPFOG00000004135	-	54	56.106	ENSMMOG00000013604	si:dkey-206d17.12	53	56.436	Mola_mola
ENSPFOG00000004135	-	54	59.935	ENSMMOG00000005728	-	88	46.795	Mola_mola
ENSPFOG00000004135	-	99	43.433	ENSMODG00000017794	ZC3H12A	93	42.685	Monodelphis_domestica
ENSPFOG00000004135	-	99	60.381	ENSMALG00000018908	-	99	60.929	Monopterus_albus
ENSPFOG00000004135	-	61	53.868	ENSMALG00000012319	zc3h12a	55	53.868	Monopterus_albus
ENSPFOG00000004135	-	57	58.861	MGP_PahariEiJ_G0028793	Zc3h12a	52	58.861	Mus_pahari
ENSPFOG00000004135	-	53	61.775	MGP_SPRETEiJ_G0027441	Zc3h12a	82	58.442	Mus_spretus
ENSPFOG00000004135	-	54	60.269	ENSMPUG00000014758	ZC3H12A	94	40.734	Mustela_putorius_furo
ENSPFOG00000004135	-	58	57.413	ENSMLUG00000027279	ZC3H12A	92	41.549	Myotis_lucifugus
ENSPFOG00000004135	-	98	40.941	ENSNGAG00000018725	Zc3h12a	92	41.239	Nannospalax_galili
ENSPFOG00000004135	-	53	56.655	ENSNBRG00000012175	-	92	47.059	Neolamprologus_brichardi
ENSPFOG00000004135	-	99	67.776	ENSNBRG00000010961	-	83	87.273	Neolamprologus_brichardi
ENSPFOG00000004135	-	54	58.472	ENSNBRG00000014376	si:dkey-206d17.12	51	59.000	Neolamprologus_brichardi
ENSPFOG00000004135	-	53	57.394	ENSNLEG00000011545	ZC3H12A	91	40.000	Nomascus_leucogenys
ENSPFOG00000004135	-	97	32.923	ENSMEUG00000003389	ZC3H12A	99	32.923	Notamacropus_eugenii
ENSPFOG00000004135	-	54	58.472	ENSONIG00000013685	si:dkey-206d17.12	54	58.667	Oreochromis_niloticus
ENSPFOG00000004135	-	97	43.038	ENSONIG00000016235	zc3h12a	53	58.940	Oreochromis_niloticus
ENSPFOG00000004135	-	99	41.459	ENSOANG00000002060	ZC3H12A	90	41.459	Ornithorhynchus_anatinus
ENSPFOG00000004135	-	53	61.856	ENSOCUG00000010856	ZC3H12A	75	61.856	Oryctolagus_cuniculus
ENSPFOG00000004135	-	99	61.210	ENSORLG00000015280	-	99	61.525	Oryzias_latipes
ENSPFOG00000004135	-	56	55.663	ENSORLG00020016107	-	55	55.663	Oryzias_latipes_hni
ENSPFOG00000004135	-	99	61.002	ENSORLG00020008580	-	87	61.348	Oryzias_latipes_hni
ENSPFOG00000004135	-	99	61.181	ENSORLG00015003680	-	87	61.525	Oryzias_latipes_hsok
ENSPFOG00000004135	-	99	39.649	ENSORLG00015007634	ZC3H12A	98	39.680	Oryzias_latipes_hsok
ENSPFOG00000004135	-	52	58.966	ENSOMEG00000005602	si:dkey-206d17.12	51	58.966	Oryzias_melastigma
ENSPFOG00000004135	-	99	61.982	ENSOMEG00000011669	-	99	61.879	Oryzias_melastigma
ENSPFOG00000004135	-	55	58.958	ENSOARG00000019760	ZC3H12A	71	58.958	Ovis_aries
ENSPFOG00000004135	-	53	61.856	ENSPPAG00000041054	ZC3H12A	78	59.459	Pan_paniscus
ENSPFOG00000004135	-	53	60.825	ENSPTIG00000012943	ZC3H12A	80	58.036	Panthera_tigris_altaica
ENSPFOG00000004135	-	53	61.856	ENSPTRG00000000544	ZC3H12A	78	59.459	Pan_troglodytes
ENSPFOG00000004135	-	53	61.856	ENSPANG00000011821	ZC3H12A	78	59.459	Papio_anubis
ENSPFOG00000004135	-	98	49.827	ENSPKIG00000019720	-	99	49.827	Paramormyrops_kingsleyae
ENSPFOG00000004135	-	53	61.695	ENSPSIG00000009198	ZC3H12A	51	61.695	Pelodiscus_sinensis
ENSPFOG00000004135	-	53	56.314	ENSPMGG00000004114	zc3h12a	52	56.314	Periophthalmus_magnuspinnatus
ENSPFOG00000004135	-	53	57.239	ENSPMGG00000009790	-	56	57.282	Periophthalmus_magnuspinnatus
ENSPFOG00000004135	-	99	98.694	ENSPLAG00000001211	-	99	98.694	Poecilia_latipinna
ENSPFOG00000004135	-	99	38.673	ENSPLAG00000020965	zc3h12a	96	38.969	Poecilia_latipinna
ENSPFOG00000004135	-	73	36.585	ENSPLAG00000016243	si:dkey-206d17.12	91	37.143	Poecilia_latipinna
ENSPFOG00000004135	-	99	39.459	ENSPMEG00000011188	si:dkey-206d17.12	94	38.628	Poecilia_mexicana
ENSPFOG00000004135	-	99	96.118	ENSPREG00000020369	-	95	96.118	Poecilia_reticulata
ENSPFOG00000004135	-	53	60.535	ENSPREG00000001607	-	73	58.222	Poecilia_reticulata
ENSPFOG00000004135	-	53	61.856	ENSPPYG00000001534	ZC3H12A	91	41.289	Pongo_abelii
ENSPFOG00000004135	-	81	41.649	ENSPCAG00000007720	ZC3H12A	99	43.226	Procavia_capensis
ENSPFOG00000004135	-	99	67.951	ENSPNYG00000010663	-	94	67.951	Pundamilia_nyererei
ENSPFOG00000004135	-	99	48.833	ENSPNAG00000012124	-	99	49.331	Pygocentrus_nattereri
ENSPFOG00000004135	-	98	42.185	ENSPNAG00000015494	zc3h12a	97	42.185	Pygocentrus_nattereri
ENSPFOG00000004135	-	53	62.199	ENSRBIG00000042237	ZC3H12A	91	42.652	Rhinopithecus_bieti
ENSPFOG00000004135	-	53	62.199	ENSRROG00000037444	ZC3H12A	78	59.910	Rhinopithecus_roxellana
ENSPFOG00000004135	-	53	63.014	ENSSBOG00000028357	ZC3H12A	91	43.031	Saimiri_boliviensis_boliviensis
ENSPFOG00000004135	-	82	42.363	ENSSHAG00000011780	-	99	42.159	Sarcophilus_harrisii
ENSPFOG00000004135	-	99	62.887	ENSSMAG00000017632	-	99	62.371	Scophthalmus_maximus
ENSPFOG00000004135	-	99	42.219	ENSSMAG00000005140	zc3h12a	96	42.053	Scophthalmus_maximus
ENSPFOG00000004135	-	53	58.194	ENSSDUG00000013237	-	89	50.000	Seriola_dumerili
ENSPFOG00000004135	-	100	67.185	ENSSDUG00000010581	-	90	84.892	Seriola_dumerili
ENSPFOG00000004135	-	100	65.874	ENSSLDG00000022022	-	95	65.983	Seriola_lalandi_dorsalis
ENSPFOG00000004135	-	99	70.107	ENSSPAG00000022537	-	94	70.285	Stegastes_partitus
ENSPFOG00000004135	-	53	57.333	ENSSPAG00000020938	si:dkey-206d17.12	53	57.333	Stegastes_partitus
ENSPFOG00000004135	-	99	39.286	ENSSSCG00000037815	ZC3H12A	95	41.026	Sus_scrofa
ENSPFOG00000004135	-	84	45.299	ENSTGUG00000001563	ZC3H12A	98	45.064	Taeniopygia_guttata
ENSPFOG00000004135	-	56	55.556	ENSTRUG00000010565	si:dkey-206d17.12	54	55.556	Takifugu_rubripes
ENSPFOG00000004135	-	54	57.143	ENSTNIG00000001274	si:dkey-206d17.12	56	57.047	Tetraodon_nigroviridis
ENSPFOG00000004135	-	55	59.211	ENSTTRG00000008591	ZC3H12A	92	40.587	Tursiops_truncatus
ENSPFOG00000004135	-	61	55.294	ENSUAMG00000014105	ZC3H12A	91	41.710	Ursus_americanus
ENSPFOG00000004135	-	61	55.000	ENSUMAG00000001122	ZC3H12A	93	41.812	Ursus_maritimus
ENSPFOG00000004135	-	53	60.339	ENSVVUG00000023171	ZC3H12A	51	60.339	Vulpes_vulpes
ENSPFOG00000004135	-	53	60.606	ENSXETG00000011465	zc3h12a	53	60.606	Xenopus_tropicalis
ENSPFOG00000004135	-	100	94.107	ENSXCOG00000001538	-	100	94.107	Xiphophorus_couchianus
ENSPFOG00000004135	-	53	57.679	ENSXCOG00000008984	zc3h12a	87	43.357	Xiphophorus_couchianus
ENSPFOG00000004135	-	53	59.801	ENSXMAG00000014715	-	83	58.590	Xiphophorus_maculatus
ENSPFOG00000004135	-	100	93.211	ENSXMAG00000005023	-	100	93.211	Xiphophorus_maculatus
ENSPFOG00000004135	-	99	38.768	ENSXMAG00000025043	si:dkey-206d17.12	94	38.256	Xiphophorus_maculatus