EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000004176 (Gene tree)
Gene ID: 103136041
Gene Symbol: SCAF8
Alias: -
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 27062 bases
Position: chrKI519640.1:338314-365375
Accession: 103136041
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000023460	RRM_1	PF00076.22	4.9e-09	1	1
ENSPFOP00000004320	RRM_1	PF00076.22	5.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000004328	SCAF8-202	4363	XM_007549118	ENSPFOP00000004320	1382 (aa)	XP_007549179	A0A087XEW7
ENSPFOT00000025796	SCAF8-201	3956	-	ENSPFOP00000023460	1251 (aa)	-	A0A096LWB9

Gene Model

Click here to download ENSPFOG00000004176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000004176's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000004176	SCAF8	100	55.057	ENSG00000213079	SCAF8	100	54.767	Homo_sapiens
ENSPFOG00000004176	SCAF8	93	92.268	ENSAPOG00000015527	SCAF8	100	81.599	Acanthochromis_polyacanthus
ENSPFOG00000004176	SCAF8	100	54.341	ENSAMEG00000007583	SCAF8	97	54.204	Ailuropoda_melanoleuca
ENSPFOG00000004176	SCAF8	93	92.010	ENSAOCG00000002421	SCAF8	100	81.016	Amphiprion_ocellaris
ENSPFOG00000004176	SCAF8	98	72.073	ENSAPEG00000020115	SCAF8	55	82.026	Amphiprion_percula
ENSPFOG00000004176	SCAF8	85	84.379	ENSATEG00000006959	SCAF8	95	84.379	Anabas_testudineus
ENSPFOG00000004176	SCAF8	53	66.554	ENSACAG00000005282	SCAF8	89	72.825	Anolis_carolinensis
ENSPFOG00000004176	SCAF8	100	55.057	ENSANAG00000036184	SCAF8	100	54.767	Aotus_nancymaae
ENSPFOG00000004176	SCAF8	92	92.139	ENSACLG00000018828	SCAF8	87	92.139	Astatotilapia_calliptera
ENSPFOG00000004176	SCAF8	100	54.642	ENSBTAG00000031917	SCAF8	86	69.410	Bos_taurus
ENSPFOG00000004176	SCAF8	93	69.107	ENSCJAG00000012631	SCAF8	97	53.869	Callithrix_jacchus
ENSPFOG00000004176	SCAF8	99	54.325	ENSCAFG00000000570	SCAF8	85	69.240	Canis_familiaris
ENSPFOG00000004176	SCAF8	99	54.325	ENSCAFG00020015048	SCAF8	84	69.240	Canis_lupus_dingo
ENSPFOG00000004176	SCAF8	100	54.792	ENSCHIG00000025041	SCAF8	86	69.410	Capra_hircus
ENSPFOG00000004176	SCAF8	100	54.381	ENSTSYG00000010991	SCAF8	98	54.539	Carlito_syrichta
ENSPFOG00000004176	SCAF8	59	75.319	ENSCAPG00000003300	SCAF8	77	75.319	Cavia_aperea
ENSPFOG00000004176	SCAF8	99	47.389	ENSCPOG00000022216	-	95	58.201	Cavia_porcellus
ENSPFOG00000004176	SCAF8	93	60.323	ENSCPOG00000030311	-	54	55.114	Cavia_porcellus
ENSPFOG00000004176	SCAF8	100	54.264	ENSCCAG00000024952	SCAF8	100	54.539	Cebus_capucinus
ENSPFOG00000004176	SCAF8	100	54.905	ENSCATG00000035361	SCAF8	100	54.615	Cercocebus_atys
ENSPFOG00000004176	SCAF8	100	53.550	ENSCLAG00000004910	SCAF8	86	68.120	Chinchilla_lanigera
ENSPFOG00000004176	SCAF8	100	54.117	ENSCSAG00000013430	SCAF8	100	53.829	Chlorocebus_sabaeus
ENSPFOG00000004176	SCAF8	90	72.881	ENSCPBG00000016330	SCAF8	78	73.012	Chrysemys_picta_bellii
ENSPFOG00000004176	SCAF8	100	54.981	ENSCANG00000039499	SCAF8	85	69.039	Colobus_angolensis_palliatus
ENSPFOG00000004176	SCAF8	100	54.251	ENSCGRG00001020167	Scaf8	53	54.501	Cricetulus_griseus_chok1gshd
ENSPFOG00000004176	SCAF8	99	53.939	ENSCGRG00000004120	Scaf8	53	54.501	Cricetulus_griseus_crigri
ENSPFOG00000004176	SCAF8	95	87.130	ENSCSEG00000000043	-	100	73.744	Cynoglossus_semilaevis
ENSPFOG00000004176	SCAF8	96	85.138	ENSCVAG00000000925	SCAF8	99	84.914	Cyprinodon_variegatus
ENSPFOG00000004176	SCAF8	96	52.437	ENSDNOG00000025271	SCAF8	87	65.385	Dasypus_novemcinctus
ENSPFOG00000004176	SCAF8	99	54.601	ENSDORG00000006391	Scaf8	86	69.279	Dipodomys_ordii
ENSPFOG00000004176	SCAF8	92	69.762	ENSEASG00005018879	SCAF8	86	69.458	Equus_asinus_asinus
ENSPFOG00000004176	SCAF8	92	69.975	ENSECAG00000005540	SCAF8	86	69.667	Equus_caballus
ENSPFOG00000004176	SCAF8	84	77.792	ENSELUG00000002779	SCAF8	100	62.191	Esox_lucius
ENSPFOG00000004176	SCAF8	100	55.429	ENSFCAG00000023424	SCAF8	85	70.449	Felis_catus
ENSPFOG00000004176	SCAF8	100	54.221	ENSFDAG00000010335	SCAF8	91	68.025	Fukomys_damarensis
ENSPFOG00000004176	SCAF8	100	89.105	ENSFHEG00000008284	SCAF8	100	89.538	Fundulus_heteroclitus
ENSPFOG00000004176	SCAF8	79	74.018	ENSGMOG00000018812	SCAF8	83	77.682	Gadus_morhua
ENSPFOG00000004176	SCAF8	54	64.557	ENSGALG00000013635	SCAF8	81	71.005	Gallus_gallus
ENSPFOG00000004176	SCAF8	100	95.379	ENSGAFG00000018033	SCAF8	100	95.812	Gambusia_affinis
ENSPFOG00000004176	SCAF8	93	71.643	ENSGACG00000006909	SCAF8	99	78.222	Gasterosteus_aculeatus
ENSPFOG00000004176	SCAF8	52	63.265	ENSGAGG00000017820	-	74	63.265	Gopherus_agassizii
ENSPFOG00000004176	SCAF8	100	55.057	ENSGGOG00000008645	SCAF8	100	54.767	Gorilla_gorilla
ENSPFOG00000004176	SCAF8	92	92.010	ENSHBUG00000019537	SCAF8	87	92.010	Haplochromis_burtoni
ENSPFOG00000004176	SCAF8	100	54.601	ENSHGLG00000003619	SCAF8	100	54.726	Heterocephalus_glaber_female
ENSPFOG00000004176	SCAF8	99	54.330	ENSHGLG00100004708	SCAF8	91	68.250	Heterocephalus_glaber_male
ENSPFOG00000004176	SCAF8	99	55.249	ENSSTOG00000026043	SCAF8	99	55.402	Ictidomys_tridecemlineatus
ENSPFOG00000004176	SCAF8	99	54.469	ENSJJAG00000020480	Scaf8	50	59.091	Jaculus_jaculus
ENSPFOG00000004176	SCAF8	92	91.753	ENSKMAG00000012767	SCAF8	100	82.584	Kryptolebias_marmoratus
ENSPFOG00000004176	SCAF8	83	95.522	ENSLBEG00000012484	-	92	92.617	Labrus_bergylta
ENSPFOG00000004176	SCAF8	100	59.814	ENSLOCG00000016856	SCAF8	100	60.140	Lepisosteus_oculatus
ENSPFOG00000004176	SCAF8	100	54.491	ENSLAFG00000000022	SCAF8	86	68.966	Loxodonta_africana
ENSPFOG00000004176	SCAF8	100	54.981	ENSMFAG00000032738	SCAF8	100	54.691	Macaca_fascicularis
ENSPFOG00000004176	SCAF8	100	54.981	ENSMMUG00000015163	SCAF8	100	54.691	Macaca_mulatta
ENSPFOG00000004176	SCAF8	100	54.981	ENSMNEG00000043466	SCAF8	100	54.691	Macaca_nemestrina
ENSPFOG00000004176	SCAF8	99	54.713	ENSMLEG00000034845	SCAF8	85	69.164	Mandrillus_leucophaeus
ENSPFOG00000004176	SCAF8	85	88.646	ENSMAMG00000009457	SCAF8	100	75.346	Mastacembelus_armatus
ENSPFOG00000004176	SCAF8	92	92.010	ENSMZEG00005005698	SCAF8	87	92.010	Maylandia_zebra
ENSPFOG00000004176	SCAF8	54	63.722	ENSMGAG00000012762	SCAF8	93	68.850	Meleagris_gallopavo
ENSPFOG00000004176	SCAF8	99	54.851	ENSMAUG00000009513	Scaf8	53	54.988	Mesocricetus_auratus
ENSPFOG00000004176	SCAF8	100	55.497	ENSMICG00000028965	SCAF8	89	66.055	Microcebus_murinus
ENSPFOG00000004176	SCAF8	100	54.545	ENSMOCG00000014950	Scaf8	53	54.015	Microtus_ochrogaster
ENSPFOG00000004176	SCAF8	98	73.570	ENSMMOG00000002216	SCAF8	99	72.991	Mola_mola
ENSPFOG00000004176	SCAF8	56	60.479	ENSMODG00000008301	SCAF8	56	60.778	Monodelphis_domestica
ENSPFOG00000004176	SCAF8	100	78.258	ENSMALG00000011584	SCAF8	100	77.943	Monopterus_albus
ENSPFOG00000004176	SCAF8	100	54.436	MGP_CAROLIEiJ_G0021016	Scaf8	56	59.375	Mus_caroli
ENSPFOG00000004176	SCAF8	100	54.436	ENSMUSG00000046201	Scaf8	53	54.501	Mus_musculus
ENSPFOG00000004176	SCAF8	100	54.737	MGP_PahariEiJ_G0023334	Scaf8	53	54.745	Mus_pahari
ENSPFOG00000004176	SCAF8	100	54.082	ENSMPUG00000001974	SCAF8	100	53.869	Mustela_putorius_furo
ENSPFOG00000004176	SCAF8	100	54.346	ENSMLUG00000029190	SCAF8	90	68.642	Myotis_lucifugus
ENSPFOG00000004176	SCAF8	100	54.992	ENSNGAG00000012332	Scaf8	86	69.250	Nannospalax_galili
ENSPFOG00000004176	SCAF8	93	82.861	ENSNBRG00000009067	SCAF8	99	82.375	Neolamprologus_brichardi
ENSPFOG00000004176	SCAF8	100	54.097	ENSNLEG00000015509	SCAF8	99	53.374	Nomascus_leucogenys
ENSPFOG00000004176	SCAF8	65	74.227	ENSOPRG00000018413	-	73	74.227	Ochotona_princeps
ENSPFOG00000004176	SCAF8	100	54.691	ENSODEG00000007296	SCAF8	91	68.804	Octodon_degus
ENSPFOG00000004176	SCAF8	93	91.071	ENSONIG00000008119	SCAF8	98	91.071	Oreochromis_niloticus
ENSPFOG00000004176	SCAF8	99	54.407	ENSOCUG00000026063	SCAF8	85	69.202	Oryctolagus_cuniculus
ENSPFOG00000004176	SCAF8	89	88.531	ENSORLG00000017358	SCAF8	100	75.691	Oryzias_latipes
ENSPFOG00000004176	SCAF8	89	88.531	ENSORLG00020002214	SCAF8	100	75.478	Oryzias_latipes_hni
ENSPFOG00000004176	SCAF8	93	88.402	ENSORLG00015015779	SCAF8	100	76.258	Oryzias_latipes_hsok
ENSPFOG00000004176	SCAF8	89	89.948	ENSOMEG00000015471	SCAF8	100	77.952	Oryzias_melastigma
ENSPFOG00000004176	SCAF8	92	67.931	ENSOGAG00000034223	SCAF8	97	53.904	Otolemur_garnettii
ENSPFOG00000004176	SCAF8	99	54.635	ENSOARG00000004159	SCAF8	86	69.193	Ovis_aries
ENSPFOG00000004176	SCAF8	100	55.057	ENSPPAG00000039826	SCAF8	100	54.767	Pan_paniscus
ENSPFOG00000004176	SCAF8	100	55.513	ENSPPRG00000023175	SCAF8	100	55.378	Panthera_pardus
ENSPFOG00000004176	SCAF8	99	55.241	ENSPTIG00000014836	SCAF8	100	55.104	Panthera_tigris_altaica
ENSPFOG00000004176	SCAF8	100	55.057	ENSPTRG00000018727	SCAF8	100	54.767	Pan_troglodytes
ENSPFOG00000004176	SCAF8	100	54.905	ENSPANG00000017489	SCAF8	100	52.784	Papio_anubis
ENSPFOG00000004176	SCAF8	92	77.608	ENSPKIG00000021212	SCAF8	100	78.753	Paramormyrops_kingsleyae
ENSPFOG00000004176	SCAF8	74	74.406	ENSPSIG00000008614	SCAF8	51	64.706	Pelodiscus_sinensis
ENSPFOG00000004176	SCAF8	99	53.956	ENSPEMG00000010531	Scaf8	53	53.528	Peromyscus_maniculatus_bairdii
ENSPFOG00000004176	SCAF8	64	42.276	ENSPCIG00000001141	SCAF8	64	42.124	Phascolarctos_cinereus
ENSPFOG00000004176	SCAF8	100	99.566	ENSPLAG00000021432	SCAF8	100	99.566	Poecilia_latipinna
ENSPFOG00000004176	SCAF8	100	99.276	ENSPMEG00000007591	SCAF8	100	99.276	Poecilia_mexicana
ENSPFOG00000004176	SCAF8	100	98.046	ENSPREG00000000652	SCAF8	100	98.046	Poecilia_reticulata
ENSPFOG00000004176	SCAF8	100	54.366	ENSPPYG00000017121	SCAF8	100	53.922	Pongo_abelii
ENSPFOG00000004176	SCAF8	71	79.933	ENSPCAG00000013044	SCAF8	80	80.100	Procavia_capensis
ENSPFOG00000004176	SCAF8	100	55.589	ENSPCOG00000002067	SCAF8	88	66.009	Propithecus_coquereli
ENSPFOG00000004176	SCAF8	98	54.958	ENSPVAG00000005582	SCAF8	87	69.441	Pteropus_vampyrus
ENSPFOG00000004176	SCAF8	92	92.139	ENSPNYG00000007277	SCAF8	87	92.139	Pundamilia_nyererei
ENSPFOG00000004176	SCAF8	89	81.250	ENSPNAG00000024740	SCAF8	88	81.250	Pygocentrus_nattereri
ENSPFOG00000004176	SCAF8	100	54.361	ENSRNOG00000016919	Scaf8	57	54.015	Rattus_norvegicus
ENSPFOG00000004176	SCAF8	100	55.243	ENSRBIG00000035769	SCAF8	100	54.767	Rhinopithecus_bieti
ENSPFOG00000004176	SCAF8	100	55.243	ENSRROG00000013580	SCAF8	100	54.767	Rhinopithecus_roxellana
ENSPFOG00000004176	SCAF8	100	54.981	ENSSBOG00000027023	SCAF8	92	69.174	Saimiri_boliviensis_boliviensis
ENSPFOG00000004176	SCAF8	100	54.724	ENSSHAG00000009915	SCAF8	86	69.630	Sarcophilus_harrisii
ENSPFOG00000004176	SCAF8	100	60.759	ENSSFOG00015009481	SCAF8	62	79.200	Scleropages_formosus
ENSPFOG00000004176	SCAF8	89	88.960	ENSSMAG00000008275	SCAF8	100	75.900	Scophthalmus_maximus
ENSPFOG00000004176	SCAF8	90	72.775	ENSSPUG00000015219	SCAF8	86	77.143	Sphenodon_punctatus
ENSPFOG00000004176	SCAF8	58	94.643	ENSSPAG00000019433	SCAF8	53	94.643	Stegastes_partitus
ENSPFOG00000004176	SCAF8	100	55.403	ENSSSCG00000004070	SCAF8	91	73.415	Sus_scrofa
ENSPFOG00000004176	SCAF8	54	61.859	ENSTGUG00000011151	SCAF8	93	69.636	Taeniopygia_guttata
ENSPFOG00000004176	SCAF8	89	85.879	ENSTRUG00000009243	SCAF8	100	71.813	Takifugu_rubripes
ENSPFOG00000004176	SCAF8	85	83.333	ENSTNIG00000016885	SCAF8	99	83.036	Tetraodon_nigroviridis
ENSPFOG00000004176	SCAF8	99	53.716	ENSTTRG00000014538	SCAF8	86	68.040	Tursiops_truncatus
ENSPFOG00000004176	SCAF8	100	55.437	ENSUAMG00000024736	SCAF8	85	69.451	Ursus_americanus
ENSPFOG00000004176	SCAF8	98	54.806	ENSUMAG00000013404	SCAF8	100	54.666	Ursus_maritimus
ENSPFOG00000004176	SCAF8	51	71.252	ENSVPAG00000012465	SCAF8	84	86.036	Vicugna_pacos
ENSPFOG00000004176	SCAF8	99	54.366	ENSVVUG00000007532	SCAF8	86	69.084	Vulpes_vulpes
ENSPFOG00000004176	SCAF8	93	50.996	ENSXETG00000013132	scaf8	86	66.929	Xenopus_tropicalis
ENSPFOG00000004176	SCAF8	100	96.816	ENSXMAG00000019192	SCAF8	100	96.816	Xiphophorus_maculatus