EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000004178 (Gene tree)
Gene ID: 103151290
Gene Symbol: apex1
Alias: -
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 3469 bases
Position: chrKI519887.1:715378-718846
Accession: 103151290
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000004046	Exo_endo_phos	PF03372.23	4.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000004054	-	2036	-	ENSPFOP00000004046	310 (aa)	XP_007571328	A0A087XE43

Gene Model

Click here to download ENSPFOG00000004178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000004178's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000004178	apex1	99	67.089	ENSG00000100823	APEX1	88	72.043	Homo_sapiens
ENSPFOG00000004178	apex1	100	90.323	ENSAPOG00000017002	apex1	100	90.323	Acanthochromis_polyacanthus
ENSPFOG00000004178	apex1	99	67.405	ENSAMEG00000005418	APEX1	88	72.401	Ailuropoda_melanoleuca
ENSPFOG00000004178	apex1	89	91.336	ENSACIG00000010653	apex1	95	91.429	Amphilophus_citrinellus
ENSPFOG00000004178	apex1	100	90.323	ENSAOCG00000009649	apex1	100	90.323	Amphiprion_ocellaris
ENSPFOG00000004178	apex1	100	90.645	ENSAPEG00000021453	apex1	100	90.645	Amphiprion_percula
ENSPFOG00000004178	apex1	99	92.233	ENSATEG00000002883	apex1	97	92.233	Anabas_testudineus
ENSPFOG00000004178	apex1	90	72.500	ENSACAG00000008099	APEX1	88	72.500	Anolis_carolinensis
ENSPFOG00000004178	apex1	90	72.760	ENSANAG00000030117	APEX1	88	72.760	Aotus_nancymaae
ENSPFOG00000004178	apex1	100	90.968	ENSACLG00000018441	apex1	100	90.968	Astatotilapia_calliptera
ENSPFOG00000004178	apex1	99	85.161	ENSAMXG00000034699	apex1	99	84.839	Astyanax_mexicanus
ENSPFOG00000004178	apex1	99	66.772	ENSBTAG00000002745	APEX1	88	71.685	Bos_taurus
ENSPFOG00000004178	apex1	93	42.907	WBGene00001372	exo-3	92	44.944	Caenorhabditis_elegans
ENSPFOG00000004178	apex1	90	72.760	ENSCJAG00000009726	APEX1	88	72.760	Callithrix_jacchus
ENSPFOG00000004178	apex1	99	67.405	ENSCAFG00000032033	APEX1	88	72.760	Canis_familiaris
ENSPFOG00000004178	apex1	53	60.588	ENSCAFG00020023002	-	74	69.925	Canis_lupus_dingo
ENSPFOG00000004178	apex1	99	67.405	ENSCAFG00020014377	-	88	72.760	Canis_lupus_dingo
ENSPFOG00000004178	apex1	89	56.835	ENSCHIG00000014537	-	89	56.475	Capra_hircus
ENSPFOG00000004178	apex1	99	66.772	ENSCHIG00000007298	-	88	71.685	Capra_hircus
ENSPFOG00000004178	apex1	99	66.877	ENSTSYG00000034813	APEX1	88	71.326	Carlito_syrichta
ENSPFOG00000004178	apex1	93	64.138	ENSCAPG00000016235	APEX1	91	72.458	Cavia_aperea
ENSPFOG00000004178	apex1	99	68.139	ENSCPOG00000030909	APEX1	88	72.760	Cavia_porcellus
ENSPFOG00000004178	apex1	90	72.760	ENSCCAG00000033056	-	88	72.760	Cebus_capucinus
ENSPFOG00000004178	apex1	99	58.861	ENSCCAG00000031931	-	87	62.724	Cebus_capucinus
ENSPFOG00000004178	apex1	99	66.772	ENSCATG00000015580	APEX1	88	71.685	Cercocebus_atys
ENSPFOG00000004178	apex1	99	67.823	ENSCLAG00000001002	APEX1	88	72.401	Chinchilla_lanigera
ENSPFOG00000004178	apex1	99	67.089	ENSCSAG00000016670	-	88	72.043	Chlorocebus_sabaeus
ENSPFOG00000004178	apex1	99	67.089	ENSCSAG00000016685	-	88	72.043	Chlorocebus_sabaeus
ENSPFOG00000004178	apex1	99	69.937	ENSCPBG00000009567	APEX1	99	69.937	Chrysemys_picta_bellii
ENSPFOG00000004178	apex1	94	56.701	ENSCING00000008137	-	85	59.925	Ciona_intestinalis
ENSPFOG00000004178	apex1	86	52.985	ENSCSAVG00000007144	-	100	54.264	Ciona_savignyi
ENSPFOG00000004178	apex1	99	67.405	ENSCANG00000030726	APEX1	99	67.405	Colobus_angolensis_palliatus
ENSPFOG00000004178	apex1	99	65.397	ENSCGRG00001017046	Apex1	88	70.609	Cricetulus_griseus_chok1gshd
ENSPFOG00000004178	apex1	99	65.397	ENSCGRG00000008984	Apex1	88	70.609	Cricetulus_griseus_crigri
ENSPFOG00000004178	apex1	100	87.097	ENSCSEG00000017499	apex1	99	87.097	Cynoglossus_semilaevis
ENSPFOG00000004178	apex1	100	93.226	ENSCVAG00000022075	apex1	100	93.226	Cyprinodon_variegatus
ENSPFOG00000004178	apex1	99	85.113	ENSDARG00000045843	apex1	99	85.113	Danio_rerio
ENSPFOG00000004178	apex1	99	64.353	ENSDNOG00000042234	APEX1	83	69.176	Dasypus_novemcinctus
ENSPFOG00000004178	apex1	99	67.508	ENSDORG00000001616	Apex1	88	72.043	Dipodomys_ordii
ENSPFOG00000004178	apex1	99	67.089	ENSETEG00000004855	-	88	72.043	Echinops_telfairi
ENSPFOG00000004178	apex1	76	60.084	ENSEBUG00000000622	-	92	60.084	Eptatretus_burgeri
ENSPFOG00000004178	apex1	99	68.454	ENSEASG00005017489	APEX1	65	73.118	Equus_asinus_asinus
ENSPFOG00000004178	apex1	99	68.454	ENSECAG00000022325	APEX1	72	73.118	Equus_caballus
ENSPFOG00000004178	apex1	86	72.491	ENSEEUG00000012569	APEX1	93	72.491	Erinaceus_europaeus
ENSPFOG00000004178	apex1	99	82.903	ENSELUG00000021706	apex1	99	84.839	Esox_lucius
ENSPFOG00000004178	apex1	99	68.454	ENSFCAG00000030869	APEX1	88	73.118	Felis_catus
ENSPFOG00000004178	apex1	99	68.770	ENSFDAG00000006120	APEX1	88	73.477	Fukomys_damarensis
ENSPFOG00000004178	apex1	100	92.581	ENSFHEG00000009031	apex1	83	92.581	Fundulus_heteroclitus
ENSPFOG00000004178	apex1	100	76.774	ENSGMOG00000007943	apex1	99	76.774	Gadus_morhua
ENSPFOG00000004178	apex1	100	97.742	ENSGAFG00000005311	apex1	100	97.742	Gambusia_affinis
ENSPFOG00000004178	apex1	100	90.000	ENSGACG00000019497	apex1	99	92.105	Gasterosteus_aculeatus
ENSPFOG00000004178	apex1	99	70.570	ENSGAGG00000014999	APEX1	99	69.937	Gopherus_agassizii
ENSPFOG00000004178	apex1	99	66.772	ENSGGOG00000002128	APEX1	88	71.685	Gorilla_gorilla
ENSPFOG00000004178	apex1	100	90.968	ENSHBUG00000005894	apex1	100	90.968	Haplochromis_burtoni
ENSPFOG00000004178	apex1	99	69.401	ENSHGLG00000002848	APEX1	88	73.118	Heterocephalus_glaber_female
ENSPFOG00000004178	apex1	99	69.401	ENSHGLG00100017878	APEX1	88	73.118	Heterocephalus_glaber_male
ENSPFOG00000004178	apex1	100	86.817	ENSHCOG00000009961	apex1	100	86.817	Hippocampus_comes
ENSPFOG00000004178	apex1	99	83.871	ENSIPUG00000005799	apex1	99	83.871	Ictalurus_punctatus
ENSPFOG00000004178	apex1	99	67.405	ENSSTOG00000010096	APEX1	88	72.760	Ictidomys_tridecemlineatus
ENSPFOG00000004178	apex1	92	62.456	ENSJJAG00000020465	-	90	63.441	Jaculus_jaculus
ENSPFOG00000004178	apex1	99	59.810	ENSJJAG00000003660	-	88	63.441	Jaculus_jaculus
ENSPFOG00000004178	apex1	99	67.089	ENSJJAG00000012067	-	88	71.685	Jaculus_jaculus
ENSPFOG00000004178	apex1	100	91.935	ENSKMAG00000021171	apex1	100	91.935	Kryptolebias_marmoratus
ENSPFOG00000004178	apex1	100	89.355	ENSLBEG00000010248	apex1	100	89.355	Labrus_bergylta
ENSPFOG00000004178	apex1	99	73.248	ENSLACG00000008617	APEX1	89	77.857	Latimeria_chalumnae
ENSPFOG00000004178	apex1	99	77.955	ENSLOCG00000015516	apex1	99	76.997	Lepisosteus_oculatus
ENSPFOG00000004178	apex1	90	73.118	ENSLAFG00000021872	APEX1	88	73.118	Loxodonta_africana
ENSPFOG00000004178	apex1	99	66.772	ENSMFAG00000002565	APEX1	88	71.685	Macaca_fascicularis
ENSPFOG00000004178	apex1	99	66.772	ENSMMUG00000048039	APEX1	88	71.685	Macaca_mulatta
ENSPFOG00000004178	apex1	99	66.772	ENSMNEG00000036944	APEX1	88	71.685	Macaca_nemestrina
ENSPFOG00000004178	apex1	99	66.772	ENSMLEG00000042125	APEX1	88	71.685	Mandrillus_leucophaeus
ENSPFOG00000004178	apex1	100	92.258	ENSMAMG00000023526	apex1	100	92.258	Mastacembelus_armatus
ENSPFOG00000004178	apex1	100	90.968	ENSMZEG00005014187	apex1	100	90.968	Maylandia_zebra
ENSPFOG00000004178	apex1	99	66.139	ENSMAUG00000013994	Apex1	88	70.251	Mesocricetus_auratus
ENSPFOG00000004178	apex1	99	67.089	ENSMICG00000043554	APEX1	99	67.089	Microcebus_murinus
ENSPFOG00000004178	apex1	99	67.192	ENSMOCG00000013721	Apex1	88	72.760	Microtus_ochrogaster
ENSPFOG00000004178	apex1	100	86.495	ENSMMOG00000010031	apex1	97	86.495	Mola_mola
ENSPFOG00000004178	apex1	90	70.609	ENSMODG00000007125	APEX1	87	70.609	Monodelphis_domestica
ENSPFOG00000004178	apex1	90	83.571	ENSMALG00000011699	apex1	75	83.571	Monopterus_albus
ENSPFOG00000004178	apex1	99	68.153	MGP_CAROLIEiJ_G0019209	Apex1	99	68.153	Mus_caroli
ENSPFOG00000004178	apex1	99	67.937	ENSMUSG00000035960	Apex1	99	67.937	Mus_musculus
ENSPFOG00000004178	apex1	99	67.937	MGP_PahariEiJ_G0030232	Apex1	99	67.937	Mus_pahari
ENSPFOG00000004178	apex1	99	67.937	MGP_SPRETEiJ_G0020101	Apex1	99	67.937	Mus_spretus
ENSPFOG00000004178	apex1	99	67.085	ENSMLUG00000028957	APEX1	87	72.043	Myotis_lucifugus
ENSPFOG00000004178	apex1	99	66.772	ENSNGAG00000002725	-	87	72.826	Nannospalax_galili
ENSPFOG00000004178	apex1	87	55.755	ENSNGAG00000021748	-	72	58.333	Nannospalax_galili
ENSPFOG00000004178	apex1	100	90.968	ENSNBRG00000005334	apex1	91	90.968	Neolamprologus_brichardi
ENSPFOG00000004178	apex1	99	66.772	ENSNLEG00000010839	APEX1	99	66.772	Nomascus_leucogenys
ENSPFOG00000004178	apex1	99	65.815	ENSMEUG00000014519	APEX1	89	69.892	Notamacropus_eugenii
ENSPFOG00000004178	apex1	99	67.089	ENSOPRG00000014029	APEX1	88	71.326	Ochotona_princeps
ENSPFOG00000004178	apex1	99	52.322	ENSODEG00000006583	-	87	55.439	Octodon_degus
ENSPFOG00000004178	apex1	99	68.454	ENSODEG00000001703	-	88	73.118	Octodon_degus
ENSPFOG00000004178	apex1	93	54.355	ENSODEG00000004777	-	83	59.127	Octodon_degus
ENSPFOG00000004178	apex1	100	90.968	ENSONIG00000012089	apex1	100	90.968	Oreochromis_niloticus
ENSPFOG00000004178	apex1	92	68.772	ENSOANG00000008836	APEX1	68	70.545	Ornithorhynchus_anatinus
ENSPFOG00000004178	apex1	99	67.405	ENSOCUG00000005022	APEX1	88	72.760	Oryctolagus_cuniculus
ENSPFOG00000004178	apex1	100	91.961	ENSORLG00000012378	apex1	100	91.961	Oryzias_latipes
ENSPFOG00000004178	apex1	100	91.961	ENSORLG00020021371	apex1	100	91.961	Oryzias_latipes_hni
ENSPFOG00000004178	apex1	100	91.961	ENSORLG00015020089	apex1	100	91.961	Oryzias_latipes_hsok
ENSPFOG00000004178	apex1	100	90.997	ENSOMEG00000018876	apex1	100	90.997	Oryzias_melastigma
ENSPFOG00000004178	apex1	99	68.038	ENSOGAG00000013335	-	88	73.118	Otolemur_garnettii
ENSPFOG00000004178	apex1	98	61.513	ENSOGAG00000029355	-	89	64.875	Otolemur_garnettii
ENSPFOG00000004178	apex1	96	64.052	ENSOARG00000001876	-	87	68.773	Ovis_aries
ENSPFOG00000004178	apex1	99	67.405	ENSOARG00000019740	-	88	72.401	Ovis_aries
ENSPFOG00000004178	apex1	96	58.940	ENSOARG00000014424	-	89	60.215	Ovis_aries
ENSPFOG00000004178	apex1	99	67.089	ENSPPAG00000038760	APEX1	89	72.043	Pan_paniscus
ENSPFOG00000004178	apex1	99	67.722	ENSPPRG00000011794	APEX1	88	73.118	Panthera_pardus
ENSPFOG00000004178	apex1	99	68.454	ENSPTIG00000014829	APEX1	88	73.118	Panthera_tigris_altaica
ENSPFOG00000004178	apex1	99	67.089	ENSPTRG00000006093	APEX1	89	72.043	Pan_troglodytes
ENSPFOG00000004178	apex1	99	66.772	ENSPANG00000022757	APEX1	88	71.685	Papio_anubis
ENSPFOG00000004178	apex1	89	88.043	ENSPKIG00000003504	apex1	99	84.615	Paramormyrops_kingsleyae
ENSPFOG00000004178	apex1	86	76.952	ENSPMGG00000016596	apex1	79	76.952	Periophthalmus_magnuspinnatus
ENSPFOG00000004178	apex1	99	66.667	ENSPEMG00000019097	Apex1	88	72.043	Peromyscus_maniculatus_bairdii
ENSPFOG00000004178	apex1	93	71.821	ENSPMAG00000007275	-	95	73.118	Petromyzon_marinus
ENSPFOG00000004178	apex1	90	69.892	ENSPCIG00000023274	APEX1	87	69.892	Phascolarctos_cinereus
ENSPFOG00000004178	apex1	100	98.387	ENSPLAG00000012779	apex1	100	98.387	Poecilia_latipinna
ENSPFOG00000004178	apex1	100	100.000	ENSPMEG00000019623	apex1	100	100.000	Poecilia_mexicana
ENSPFOG00000004178	apex1	100	97.419	ENSPREG00000014298	apex1	99	97.419	Poecilia_reticulata
ENSPFOG00000004178	apex1	99	66.772	ENSPPYG00000005565	APEX1	88	71.685	Pongo_abelii
ENSPFOG00000004178	apex1	99	65.190	ENSPCAG00000010376	APEX1	88	70.609	Procavia_capensis
ENSPFOG00000004178	apex1	99	67.405	ENSPCOG00000021564	APEX1	99	67.405	Propithecus_coquereli
ENSPFOG00000004178	apex1	99	66.667	ENSPVAG00000010736	APEX1	87	72.401	Pteropus_vampyrus
ENSPFOG00000004178	apex1	100	91.290	ENSPNYG00000023940	apex1	100	91.290	Pundamilia_nyererei
ENSPFOG00000004178	apex1	92	86.014	ENSPNAG00000020897	apex1	96	85.965	Pygocentrus_nattereri
ENSPFOG00000004178	apex1	99	67.302	ENSRNOG00000009663	Apex1	88	72.760	Rattus_norvegicus
ENSPFOG00000004178	apex1	99	67.089	ENSRBIG00000038325	APEX1	87	72.043	Rhinopithecus_bieti
ENSPFOG00000004178	apex1	99	60.323	ENSSBOG00000031372	-	91	63.441	Saimiri_boliviensis_boliviensis
ENSPFOG00000004178	apex1	90	72.760	ENSSBOG00000018921	-	88	72.760	Saimiri_boliviensis_boliviensis
ENSPFOG00000004178	apex1	100	63.694	ENSSHAG00000013524	APEX1	87	69.149	Sarcophilus_harrisii
ENSPFOG00000004178	apex1	99	80.323	ENSSFOG00015001948	apex1	99	82.581	Scleropages_formosus
ENSPFOG00000004178	apex1	100	86.667	ENSSMAG00000013348	apex1	100	86.984	Scophthalmus_maximus
ENSPFOG00000004178	apex1	100	91.290	ENSSDUG00000016377	apex1	99	91.290	Seriola_dumerili
ENSPFOG00000004178	apex1	100	91.290	ENSSLDG00000023005	apex1	100	91.290	Seriola_lalandi_dorsalis
ENSPFOG00000004178	apex1	90	73.929	ENSSPUG00000000531	APEX1	94	73.835	Sphenodon_punctatus
ENSPFOG00000004178	apex1	100	88.710	ENSSPAG00000000458	apex1	100	88.710	Stegastes_partitus
ENSPFOG00000004178	apex1	99	67.722	ENSSSCG00000040060	-	99	67.722	Sus_scrofa
ENSPFOG00000004178	apex1	95	40.594	ENSSSCG00000039705	-	89	42.238	Sus_scrofa
ENSPFOG00000004178	apex1	76	58.723	ENSTGUG00000014378	APEX1	100	58.723	Taeniopygia_guttata
ENSPFOG00000004178	apex1	100	82.748	ENSTRUG00000004268	apex1	95	83.706	Takifugu_rubripes
ENSPFOG00000004178	apex1	100	84.194	ENSTNIG00000005778	apex1	100	84.194	Tetraodon_nigroviridis
ENSPFOG00000004178	apex1	99	64.241	ENSTBEG00000006405	APEX1	88	69.176	Tupaia_belangeri
ENSPFOG00000004178	apex1	76	71.489	ENSTTRG00000007860	APEX1	100	71.489	Tursiops_truncatus
ENSPFOG00000004178	apex1	99	67.823	ENSUAMG00000010457	APEX1	88	72.401	Ursus_americanus
ENSPFOG00000004178	apex1	99	67.823	ENSUMAG00000009178	APEX1	88	72.401	Ursus_maritimus
ENSPFOG00000004178	apex1	76	66.809	ENSVPAG00000005083	APEX1	100	66.809	Vicugna_pacos
ENSPFOG00000004178	apex1	99	67.089	ENSVVUG00000009010	APEX1	88	72.401	Vulpes_vulpes
ENSPFOG00000004178	apex1	99	68.471	ENSXETG00000024773	apex1	99	67.834	Xenopus_tropicalis
ENSPFOG00000004178	apex1	100	97.742	ENSXCOG00000015233	apex1	99	97.742	Xiphophorus_couchianus
ENSPFOG00000004178	apex1	100	97.742	ENSXMAG00000006195	apex1	100	97.742	Xiphophorus_maculatus