EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000004182 (Gene tree)
Gene ID: 103156411
Gene Symbol: xrn2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 17904 bases
Position: chrKI520090.1:190329-208232
Accession: 103156411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000021686	XRN_N	PF03159.18	3.5e-102	1	1
ENSPFOP00000004509	XRN_N	PF03159.18	3.5e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000029871	-	3363	-	ENSPFOP00000021686	954 (aa)	-	A0A096LR95
ENSPFOT00000004517	-	3402	XM_016664335	ENSPFOP00000004509	967 (aa)	XP_016519821	A0A087XFF6

Gene Model

Click here to download ENSPFOG00000004182's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000004182's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000004182	xrn2	99	70.393	ENSG00000088930	XRN2	100	69.990	Homo_sapiens
ENSPFOG00000004182	xrn2	96	86.310	ENSAPOG00000009818	xrn2	100	84.765	Acanthochromis_polyacanthus
ENSPFOG00000004182	xrn2	99	70.290	ENSAMEG00000012581	XRN2	100	69.886	Ailuropoda_melanoleuca
ENSPFOG00000004182	xrn2	90	81.194	ENSACIG00000015047	xrn2	95	86.857	Amphilophus_citrinellus
ENSPFOG00000004182	xrn2	96	86.845	ENSAOCG00000023632	xrn2	100	85.276	Amphiprion_ocellaris
ENSPFOG00000004182	xrn2	96	86.952	ENSAPEG00000014871	xrn2	100	85.583	Amphiprion_percula
ENSPFOG00000004182	xrn2	96	85.668	ENSATEG00000001273	xrn2	99	84.953	Anabas_testudineus
ENSPFOG00000004182	xrn2	94	70.724	ENSAPLG00000013869	XRN2	100	68.856	Anas_platyrhynchos
ENSPFOG00000004182	xrn2	99	70.431	ENSACAG00000005565	XRN2	100	69.570	Anolis_carolinensis
ENSPFOG00000004182	xrn2	99	70.290	ENSANAG00000020126	XRN2	100	69.886	Aotus_nancymaae
ENSPFOG00000004182	xrn2	90	85.270	ENSACLG00000010522	xrn2	98	85.270	Astatotilapia_calliptera
ENSPFOG00000004182	xrn2	99	78.345	ENSAMXG00000018301	xrn2	100	78.119	Astyanax_mexicanus
ENSPFOG00000004182	xrn2	99	69.782	ENSBTAG00000011304	XRN2	100	69.087	Bos_taurus
ENSPFOG00000004182	xrn2	86	53.721	WBGene00006964	xrn-2	97	50.153	Caenorhabditis_elegans
ENSPFOG00000004182	xrn2	99	70.186	ENSCJAG00000005611	XRN2	100	69.782	Callithrix_jacchus
ENSPFOG00000004182	xrn2	99	70.393	ENSCAFG00000005185	XRN2	100	69.990	Canis_familiaris
ENSPFOG00000004182	xrn2	99	70.393	ENSCAFG00020027479	XRN2	100	69.990	Canis_lupus_dingo
ENSPFOG00000004182	xrn2	99	69.886	ENSCHIG00000006921	XRN2	100	69.191	Capra_hircus
ENSPFOG00000004182	xrn2	99	70.259	ENSTSYG00000008315	XRN2	100	69.854	Carlito_syrichta
ENSPFOG00000004182	xrn2	97	59.768	ENSCAPG00000010773	XRN2	99	58.723	Cavia_aperea
ENSPFOG00000004182	xrn2	99	70.704	ENSCPOG00000009407	XRN2	100	70.301	Cavia_porcellus
ENSPFOG00000004182	xrn2	99	70.393	ENSCATG00000040350	XRN2	100	69.990	Cercocebus_atys
ENSPFOG00000004182	xrn2	99	70.600	ENSCLAG00000013419	XRN2	100	70.197	Chinchilla_lanigera
ENSPFOG00000004182	xrn2	99	70.393	ENSCSAG00000011094	XRN2	100	69.990	Chlorocebus_sabaeus
ENSPFOG00000004182	xrn2	60	87.634	ENSCHOG00000013404	XRN2	63	87.634	Choloepus_hoffmanni
ENSPFOG00000004182	xrn2	97	71.928	ENSCPBG00000023533	XRN2	100	70.256	Chrysemys_picta_bellii
ENSPFOG00000004182	xrn2	86	59.450	ENSCING00000022336	-	100	60.355	Ciona_intestinalis
ENSPFOG00000004182	xrn2	80	70.000	ENSCSAVG00000011217	-	91	71.084	Ciona_savignyi
ENSPFOG00000004182	xrn2	99	70.393	ENSCANG00000040240	XRN2	100	69.990	Colobus_angolensis_palliatus
ENSPFOG00000004182	xrn2	97	71.991	ENSCGRG00001010676	Xrn2	99	71.368	Cricetulus_griseus_chok1gshd
ENSPFOG00000004182	xrn2	97	70.043	ENSCGRG00000006378	Xrn2	99	69.412	Cricetulus_griseus_crigri
ENSPFOG00000004182	xrn2	53	81.729	ENSCSEG00000005628	xrn2	99	81.532	Cynoglossus_semilaevis
ENSPFOG00000004182	xrn2	91	87.416	ENSCVAG00000018999	xrn2	98	93.881	Cyprinodon_variegatus
ENSPFOG00000004182	xrn2	99	75.918	ENSDARG00000101900	xrn2	96	84.704	Danio_rerio
ENSPFOG00000004182	xrn2	99	70.497	ENSDNOG00000001895	XRN2	100	70.093	Dasypus_novemcinctus
ENSPFOG00000004182	xrn2	99	69.183	ENSDORG00000005434	Xrn2	100	68.951	Dipodomys_ordii
ENSPFOG00000004182	xrn2	86	55.461	FBgn0031868	Rat1	92	53.767	Drosophila_melanogaster
ENSPFOG00000004182	xrn2	99	61.515	ENSETEG00000001740	XRN2	93	80.292	Echinops_telfairi
ENSPFOG00000004182	xrn2	84	69.137	ENSEBUG00000016136	xrn2	100	69.137	Eptatretus_burgeri
ENSPFOG00000004182	xrn2	99	70.717	ENSEASG00005002484	XRN2	100	70.417	Equus_asinus_asinus
ENSPFOG00000004182	xrn2	94	92.308	ENSECAG00000018988	XRN2	96	92.308	Equus_caballus
ENSPFOG00000004182	xrn2	66	96.000	ENSEEUG00000009265	XRN2	67	96.000	Erinaceus_europaeus
ENSPFOG00000004182	xrn2	99	78.557	ENSELUG00000000552	xrn2	100	78.090	Esox_lucius
ENSPFOG00000004182	xrn2	99	70.186	ENSFCAG00000007970	XRN2	100	69.782	Felis_catus
ENSPFOG00000004182	xrn2	97	71.002	ENSFALG00000004508	XRN2	100	69.160	Ficedula_albicollis
ENSPFOG00000004182	xrn2	99	70.497	ENSFDAG00000016311	XRN2	100	70.093	Fukomys_damarensis
ENSPFOG00000004182	xrn2	54	86.207	ENSFHEG00000013039	xrn2	98	86.207	Fundulus_heteroclitus
ENSPFOG00000004182	xrn2	86	80.900	ENSGMOG00000013436	xrn2	100	80.900	Gadus_morhua
ENSPFOG00000004182	xrn2	99	70.052	ENSGALG00000008372	XRN2	100	69.112	Gallus_gallus
ENSPFOG00000004182	xrn2	90	98.387	ENSGAFG00000014284	xrn2	99	98.387	Gambusia_affinis
ENSPFOG00000004182	xrn2	87	82.830	ENSGACG00000011870	xrn2	96	86.756	Gasterosteus_aculeatus
ENSPFOG00000004182	xrn2	97	71.610	ENSGAGG00000004884	XRN2	100	69.846	Gopherus_agassizii
ENSPFOG00000004182	xrn2	99	70.393	ENSGGOG00000013738	XRN2	100	69.990	Gorilla_gorilla
ENSPFOG00000004182	xrn2	54	86.973	ENSHBUG00000005077	xrn2	94	86.973	Haplochromis_burtoni
ENSPFOG00000004182	xrn2	99	69.565	ENSHGLG00000014831	XRN2	100	69.159	Heterocephalus_glaber_female
ENSPFOG00000004182	xrn2	99	69.565	ENSHGLG00100013130	XRN2	100	69.159	Heterocephalus_glaber_male
ENSPFOG00000004182	xrn2	99	80.000	ENSHCOG00000011994	xrn2	99	80.183	Hippocampus_comes
ENSPFOG00000004182	xrn2	99	77.721	ENSIPUG00000006639	xrn2	100	77.393	Ictalurus_punctatus
ENSPFOG00000004182	xrn2	99	70.704	ENSSTOG00000000589	XRN2	100	70.301	Ictidomys_tridecemlineatus
ENSPFOG00000004182	xrn2	99	70.911	ENSJJAG00000022128	Xrn2	100	70.301	Jaculus_jaculus
ENSPFOG00000004182	xrn2	53	90.392	ENSLBEG00000010041	xrn2	99	90.392	Labrus_bergylta
ENSPFOG00000004182	xrn2	93	71.778	ENSLACG00000008307	XRN2	98	75.275	Latimeria_chalumnae
ENSPFOG00000004182	xrn2	99	72.841	ENSLOCG00000016874	xrn2	93	80.227	Lepisosteus_oculatus
ENSPFOG00000004182	xrn2	99	70.661	ENSLAFG00000014624	XRN2	100	70.259	Loxodonta_africana
ENSPFOG00000004182	xrn2	99	70.393	ENSMFAG00000038122	XRN2	100	69.990	Macaca_fascicularis
ENSPFOG00000004182	xrn2	99	70.393	ENSMMUG00000011405	XRN2	100	69.990	Macaca_mulatta
ENSPFOG00000004182	xrn2	99	70.290	ENSMNEG00000040626	XRN2	100	69.886	Macaca_nemestrina
ENSPFOG00000004182	xrn2	99	70.290	ENSMLEG00000041897	XRN2	100	69.886	Mandrillus_leucophaeus
ENSPFOG00000004182	xrn2	95	85.978	ENSMAMG00000008633	xrn2	99	85.057	Mastacembelus_armatus
ENSPFOG00000004182	xrn2	90	87.227	ENSMZEG00005022362	xrn2	98	87.227	Maylandia_zebra
ENSPFOG00000004182	xrn2	99	69.318	ENSMGAG00000003196	XRN2	99	68.383	Meleagris_gallopavo
ENSPFOG00000004182	xrn2	99	71.266	ENSMAUG00000021842	Xrn2	100	70.968	Mesocricetus_auratus
ENSPFOG00000004182	xrn2	99	69.876	ENSMICG00000008126	XRN2	100	69.470	Microcebus_murinus
ENSPFOG00000004182	xrn2	99	70.613	ENSMOCG00000012588	Xrn2	100	69.990	Microtus_ochrogaster
ENSPFOG00000004182	xrn2	90	84.347	ENSMMOG00000017576	xrn2	96	86.450	Mola_mola
ENSPFOG00000004182	xrn2	99	70.747	ENSMODG00000006163	XRN2	100	70.374	Monodelphis_domestica
ENSPFOG00000004182	xrn2	90	85.358	ENSMALG00000011355	xrn2	100	85.887	Monopterus_albus
ENSPFOG00000004182	xrn2	99	70.497	MGP_CAROLIEiJ_G0024400	Xrn2	100	69.990	Mus_caroli
ENSPFOG00000004182	xrn2	99	70.497	ENSMUSG00000027433	Xrn2	100	69.990	Mus_musculus
ENSPFOG00000004182	xrn2	99	70.393	MGP_PahariEiJ_G0025843	Xrn2	100	69.886	Mus_pahari
ENSPFOG00000004182	xrn2	99	70.497	MGP_SPRETEiJ_G0025318	Xrn2	94	84.034	Mus_spretus
ENSPFOG00000004182	xrn2	99	69.074	ENSMPUG00000001198	XRN2	93	68.673	Mustela_putorius_furo
ENSPFOG00000004182	xrn2	99	70.259	ENSMLUG00000001536	XRN2	100	69.854	Myotis_lucifugus
ENSPFOG00000004182	xrn2	99	70.600	ENSNGAG00000018138	Xrn2	100	70.093	Nannospalax_galili
ENSPFOG00000004182	xrn2	90	87.227	ENSNBRG00000008062	xrn2	98	87.227	Neolamprologus_brichardi
ENSPFOG00000004182	xrn2	99	70.393	ENSNLEG00000009991	XRN2	100	69.990	Nomascus_leucogenys
ENSPFOG00000004182	xrn2	65	82.222	ENSMEUG00000008622	-	53	82.222	Notamacropus_eugenii
ENSPFOG00000004182	xrn2	75	71.053	ENSOPRG00000001397	-	63	71.053	Ochotona_princeps
ENSPFOG00000004182	xrn2	96	64.935	ENSODEG00000000860	-	98	64.502	Octodon_degus
ENSPFOG00000004182	xrn2	99	70.393	ENSODEG00000010745	-	100	69.990	Octodon_degus
ENSPFOG00000004182	xrn2	99	82.591	ENSONIG00000018720	xrn2	100	82.645	Oreochromis_niloticus
ENSPFOG00000004182	xrn2	99	70.420	ENSOANG00000015673	XRN2	100	70.420	Ornithorhynchus_anatinus
ENSPFOG00000004182	xrn2	99	70.704	ENSOCUG00000013468	XRN2	100	70.301	Oryctolagus_cuniculus
ENSPFOG00000004182	xrn2	98	83.316	ENSORLG00000017213	xrn2	97	86.536	Oryzias_latipes
ENSPFOG00000004182	xrn2	98	83.316	ENSORLG00020001824	xrn2	100	82.172	Oryzias_latipes_hni
ENSPFOG00000004182	xrn2	98	82.500	ENSORLG00015019747	xrn2	100	81.967	Oryzias_latipes_hsok
ENSPFOG00000004182	xrn2	97	82.415	ENSOMEG00000019820	xrn2	100	81.391	Oryzias_melastigma
ENSPFOG00000004182	xrn2	99	70.497	ENSOGAG00000001068	XRN2	100	70.093	Otolemur_garnettii
ENSPFOG00000004182	xrn2	97	69.157	ENSOARG00000004443	XRN2	99	68.443	Ovis_aries
ENSPFOG00000004182	xrn2	99	70.393	ENSPPAG00000033549	XRN2	100	69.990	Pan_paniscus
ENSPFOG00000004182	xrn2	99	70.186	ENSPPRG00000008732	XRN2	100	69.782	Panthera_pardus
ENSPFOG00000004182	xrn2	97	69.574	ENSPTIG00000015683	XRN2	97	69.157	Panthera_tigris_altaica
ENSPFOG00000004182	xrn2	99	70.393	ENSPTRG00000013308	XRN2	100	69.990	Pan_troglodytes
ENSPFOG00000004182	xrn2	99	70.545	ENSPANG00000018088	XRN2	100	69.990	Papio_anubis
ENSPFOG00000004182	xrn2	99	76.181	ENSPKIG00000016889	xrn2	100	76.489	Paramormyrops_kingsleyae
ENSPFOG00000004182	xrn2	80	76.684	ENSPSIG00000014666	XRN2	100	76.684	Pelodiscus_sinensis
ENSPFOG00000004182	xrn2	99	70.393	ENSPEMG00000000111	Xrn2	100	69.782	Peromyscus_maniculatus_bairdii
ENSPFOG00000004182	xrn2	92	98.198	ENSPLAG00000007351	xrn2	99	98.198	Poecilia_latipinna
ENSPFOG00000004182	xrn2	94	99.562	ENSPMEG00000011798	xrn2	100	99.562	Poecilia_mexicana
ENSPFOG00000004182	xrn2	92	98.094	ENSPREG00000012452	xrn2	99	98.092	Poecilia_reticulata
ENSPFOG00000004182	xrn2	99	70.083	ENSPPYG00000010755	XRN2	100	69.678	Pongo_abelii
ENSPFOG00000004182	xrn2	99	66.598	ENSPCAG00000011191	XRN2	100	66.008	Procavia_capensis
ENSPFOG00000004182	xrn2	99	64.389	ENSPCOG00000016468	XRN2	100	63.967	Propithecus_coquereli
ENSPFOG00000004182	xrn2	93	65.884	ENSPVAG00000004596	XRN2	93	65.884	Pteropus_vampyrus
ENSPFOG00000004182	xrn2	90	85.270	ENSPNYG00000001765	xrn2	98	85.270	Pundamilia_nyererei
ENSPFOG00000004182	xrn2	100	77.259	ENSPNAG00000010956	xrn2	100	77.033	Pygocentrus_nattereri
ENSPFOG00000004182	xrn2	99	71.132	ENSRNOG00000011785	Xrn2	100	70.613	Rattus_norvegicus
ENSPFOG00000004182	xrn2	86	75.728	ENSRBIG00000036193	XRN2	100	75.728	Rhinopithecus_bieti
ENSPFOG00000004182	xrn2	99	70.545	ENSRROG00000044400	XRN2	90	69.990	Rhinopithecus_roxellana
ENSPFOG00000004182	xrn2	71	50.106	YOR048C	RAT1	82	53.883	Saccharomyces_cerevisiae
ENSPFOG00000004182	xrn2	99	70.290	ENSSBOG00000021014	XRN2	100	69.886	Saimiri_boliviensis_boliviensis
ENSPFOG00000004182	xrn2	99	76.429	ENSSFOG00015001091	xrn2	100	75.996	Scleropages_formosus
ENSPFOG00000004182	xrn2	96	84.820	ENSSMAG00000007834	xrn2	100	82.944	Scophthalmus_maximus
ENSPFOG00000004182	xrn2	95	82.829	ENSSDUG00000012802	xrn2	99	85.034	Seriola_dumerili
ENSPFOG00000004182	xrn2	92	86.771	ENSSLDG00000021273	xrn2	98	87.657	Seriola_lalandi_dorsalis
ENSPFOG00000004182	xrn2	70	96.000	ENSSARG00000005859	-	56	96.000	Sorex_araneus
ENSPFOG00000004182	xrn2	97	69.584	ENSSPUG00000005485	XRN2	95	69.444	Sphenodon_punctatus
ENSPFOG00000004182	xrn2	100	84.615	ENSSPAG00000016027	xrn2	99	84.340	Stegastes_partitus
ENSPFOG00000004182	xrn2	99	68.841	ENSSSCG00000007109	XRN2	100	68.536	Sus_scrofa
ENSPFOG00000004182	xrn2	97	69.652	ENSTGUG00000007535	XRN2	100	67.788	Taeniopygia_guttata
ENSPFOG00000004182	xrn2	99	78.809	ENSTRUG00000015489	xrn2	100	79.213	Takifugu_rubripes
ENSPFOG00000004182	xrn2	99	76.176	ENSTNIG00000010712	xrn2	100	76.788	Tetraodon_nigroviridis
ENSPFOG00000004182	xrn2	99	70.301	ENSTBEG00000004119	XRN2	100	69.896	Tupaia_belangeri
ENSPFOG00000004182	xrn2	93	77.957	ENSTTRG00000009087	XRN2	93	77.957	Tursiops_truncatus
ENSPFOG00000004182	xrn2	99	70.290	ENSUAMG00000024634	XRN2	100	70.010	Ursus_americanus
ENSPFOG00000004182	xrn2	97	69.574	ENSUMAG00000004012	XRN2	95	69.157	Ursus_maritimus
ENSPFOG00000004182	xrn2	81	82.848	ENSVPAG00000010694	XRN2	85	82.848	Vicugna_pacos
ENSPFOG00000004182	xrn2	99	70.393	ENSVVUG00000012178	XRN2	100	69.990	Vulpes_vulpes
ENSPFOG00000004182	xrn2	99	71.739	ENSXETG00000023501	xrn2	100	71.458	Xenopus_tropicalis
ENSPFOG00000004182	xrn2	100	97.415	ENSXMAG00000000242	xrn2	100	97.415	Xiphophorus_maculatus