EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000004204 (Gene tree)
Gene ID: 103146492
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 4789 bases
Position: chrKI519769.1:729360-734148
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000004072	zf-C2H2	PF00096.26	4.4e-18	1	3
ENSPFOP00000004072	zf-C2H2	PF00096.26	4.4e-18	2	3
ENSPFOP00000004072	zf-C2H2	PF00096.26	4.4e-18	3	3
ENSPFOP00000030256	zf-C2H2	PF00096.26	2.6e-17	1	3
ENSPFOP00000030256	zf-C2H2	PF00096.26	2.6e-17	2	3
ENSPFOP00000030256	zf-C2H2	PF00096.26	2.6e-17	3	3
ENSPFOP00000004072	zf-met	PF12874.7	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000030653	-	2316	-	ENSPFOP00000030256	772 (aa)	-	A0A096MFR5
ENSPFOT00000004080	-	2471	-	ENSPFOP00000004072	630 (aa)	-	A0A087XE69

Gene Model

Click here to download ENSPFOG00000004204's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000004204's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000004204	-	98	37.443	ENSPFOG00000017913	-	100	37.615
ENSPFOG00000004204	-	66	35.808	ENSPFOG00000006287	-	67	35.808
ENSPFOG00000004204	-	51	35.319	ENSPFOG00000023476	-	93	35.319
ENSPFOG00000004204	-	50	35.795	ENSPFOG00000009806	-	100	40.230
ENSPFOG00000004204	-	50	39.394	ENSPFOG00000022426	-	100	41.096
ENSPFOG00000004204	-	58	38.043	ENSPFOG00000024642	-	99	43.243
ENSPFOG00000004204	-	52	33.036	ENSPFOG00000023510	-	77	33.482
ENSPFOG00000004204	-	52	36.406	ENSPFOG00000004894	-	99	41.704
ENSPFOG00000004204	-	53	41.441	ENSPFOG00000018774	-	88	44.118
ENSPFOG00000004204	-	50	38.028	ENSPFOG00000001310	-	87	38.028
ENSPFOG00000004204	-	99	45.771	ENSPFOG00000016324	-	97	45.771
ENSPFOG00000004204	-	65	41.176	ENSPFOG00000007847	-	100	40.237
ENSPFOG00000004204	-	53	37.387	ENSPFOG00000003366	-	74	37.387
ENSPFOG00000004204	-	50	34.426	ENSPFOG00000024692	-	59	34.426
ENSPFOG00000004204	-	66	34.649	ENSPFOG00000018784	-	99	41.704
ENSPFOG00000004204	-	50	35.152	ENSPFOG00000023590	-	70	35.152
ENSPFOG00000004204	-	65	39.062	ENSPFOG00000007728	-	98	38.739
ENSPFOG00000004204	-	50	39.189	ENSPFOG00000007938	-	98	39.189
ENSPFOG00000004204	-	51	40.244	ENSPFOG00000024635	-	80	40.244

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000004204	-	100	93.407	ENSGAFG00000016139	-	100	93.407	Gambusia_affinis
ENSPFOG00000004204	-	54	61.988	ENSMALG00000014761	-	99	61.988	Monopterus_albus
ENSPFOG00000004204	-	99	60.692	ENSORLG00000014311	-	96	64.407	Oryzias_latipes
ENSPFOG00000004204	-	99	61.006	ENSORLG00020016116	-	96	64.407	Oryzias_latipes_hni
ENSPFOG00000004204	-	99	59.748	ENSORLG00015014797	-	96	63.277	Oryzias_latipes_hsok
ENSPFOG00000004204	-	100	97.017	ENSPLAG00000022088	-	94	97.017	Poecilia_latipinna
ENSPFOG00000004204	-	100	97.331	ENSPMEG00000001411	-	94	97.331	Poecilia_mexicana
ENSPFOG00000004204	-	100	95.290	ENSPREG00000004161	-	100	95.290	Poecilia_reticulata
ENSPFOG00000004204	-	96	63.622	ENSPNYG00000020534	-	97	70.513	Pundamilia_nyererei
ENSPFOG00000004204	-	100	94.349	ENSXMAG00000011035	-	100	94.349	Xiphophorus_maculatus