EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000004214 (Gene tree)
Gene ID: 103135233
Gene Symbol: shrprbck1r
Alias: -
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1-like
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 11288 bases
Position: chrKI519632.1:797379-808666
Accession: 103135233
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000004055	zf-RanBP	PF00641.18	6.3e-07	1	1
ENSPFOP00000004061	zf-RanBP	PF00641.18	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000004069	-	4334	XM_007547859	ENSPFOP00000004061	705 (aa)	XP_007547921	A0A087XE58
ENSPFOT00000004063	-	1858	-	ENSPFOP00000004055	473 (aa)	-	A0A087XE52

Gene Model

Click here to download ENSPFOG00000004214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000004214's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000004214	shrprbck1r	97	50.951	ENSPFOG00000015253	sharpin	99	51.163

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000004214	shrprbck1r	100	80.785	ENSAPOG00000022737	shrprbck1r	100	80.785	Acanthochromis_polyacanthus
ENSPFOG00000004214	shrprbck1r	96	54.487	ENSAPOG00000023352	sharpin	98	54.487	Acanthochromis_polyacanthus
ENSPFOG00000004214	shrprbck1r	100	79.887	ENSACIG00000002184	shrprbck1r	100	79.887	Amphilophus_citrinellus
ENSPFOG00000004214	shrprbck1r	96	54.158	ENSAOCG00000017464	sharpin	98	54.158	Amphiprion_ocellaris
ENSPFOG00000004214	shrprbck1r	100	83.006	ENSAOCG00000002890	shrprbck1r	100	83.006	Amphiprion_ocellaris
ENSPFOG00000004214	shrprbck1r	100	81.346	ENSAPEG00000023274	shrprbck1r	100	81.346	Amphiprion_percula
ENSPFOG00000004214	shrprbck1r	96	54.158	ENSAPEG00000004049	sharpin	98	54.158	Amphiprion_percula
ENSPFOG00000004214	shrprbck1r	89	57.674	ENSATEG00000007832	sharpin	88	57.674	Anabas_testudineus
ENSPFOG00000004214	shrprbck1r	100	78.732	ENSATEG00000014561	shrprbck1r	100	79.014	Anabas_testudineus
ENSPFOG00000004214	shrprbck1r	59	65.714	ENSACLG00000020160	-	83	65.714	Astatotilapia_calliptera
ENSPFOG00000004214	shrprbck1r	100	78.481	ENSACLG00000022609	shrprbck1r	100	79.184	Astatotilapia_calliptera
ENSPFOG00000004214	shrprbck1r	100	68.256	ENSAMXG00000021016	shrprbck1r	100	68.493	Astyanax_mexicanus
ENSPFOG00000004214	shrprbck1r	81	56.104	ENSAMXG00000006229	sharpin	97	56.104	Astyanax_mexicanus
ENSPFOG00000004214	shrprbck1r	100	71.950	ENSCSEG00000011306	shrprbck1r	100	72.230	Cynoglossus_semilaevis
ENSPFOG00000004214	shrprbck1r	100	91.255	ENSCVAG00000007250	shrprbck1r	100	91.255	Cyprinodon_variegatus
ENSPFOG00000004214	shrprbck1r	97	51.386	ENSCVAG00000006586	sharpin	99	51.386	Cyprinodon_variegatus
ENSPFOG00000004214	shrprbck1r	81	55.013	ENSDARG00000076995	sharpin	94	55.013	Danio_rerio
ENSPFOG00000004214	shrprbck1r	100	67.822	ENSDARG00000059871	shrprbck1r	100	67.961	Danio_rerio
ENSPFOG00000004214	shrprbck1r	100	71.329	ENSELUG00000016022	shrprbck1r	100	71.329	Esox_lucius
ENSPFOG00000004214	shrprbck1r	98	49.587	ENSFHEG00000013564	sharpin	100	49.587	Fundulus_heteroclitus
ENSPFOG00000004214	shrprbck1r	80	60.303	ENSGMOG00000010123	sharpin	88	70.370	Gadus_morhua
ENSPFOG00000004214	shrprbck1r	88	43.705	ENSGAFG00000021405	sharpin	95	43.705	Gambusia_affinis
ENSPFOG00000004214	shrprbck1r	100	96.312	ENSGAFG00000009309	shrprbck1r	100	96.312	Gambusia_affinis
ENSPFOG00000004214	shrprbck1r	75	79.127	ENSGACG00000002544	shrprbck1r	99	79.127	Gasterosteus_aculeatus
ENSPFOG00000004214	shrprbck1r	100	79.184	ENSHBUG00000021933	shrprbck1r	100	79.325	Haplochromis_burtoni
ENSPFOG00000004214	shrprbck1r	89	53.318	ENSHCOG00000018847	sharpin	81	53.738	Hippocampus_comes
ENSPFOG00000004214	shrprbck1r	81	55.270	ENSIPUG00000011951	sharpin	99	55.270	Ictalurus_punctatus
ENSPFOG00000004214	shrprbck1r	96	67.100	ENSIPUG00000014247	shrprbck1r	98	65.738	Ictalurus_punctatus
ENSPFOG00000004214	shrprbck1r	100	77.839	ENSKMAG00000015215	shrprbck1r	100	78.194	Kryptolebias_marmoratus
ENSPFOG00000004214	shrprbck1r	88	56.582	ENSKMAG00000015204	sharpin	76	56.582	Kryptolebias_marmoratus
ENSPFOG00000004214	shrprbck1r	96	53.846	ENSLBEG00000016624	sharpin	96	56.322	Labrus_bergylta
ENSPFOG00000004214	shrprbck1r	100	80.000	ENSLBEG00000016876	shrprbck1r	100	80.563	Labrus_bergylta
ENSPFOG00000004214	shrprbck1r	95	53.411	ENSLACG00000010948	-	97	53.411	Latimeria_chalumnae
ENSPFOG00000004214	shrprbck1r	100	66.990	ENSLOCG00000008910	shrprbck1r	100	67.452	Lepisosteus_oculatus
ENSPFOG00000004214	shrprbck1r	100	78.592	ENSMAMG00000022930	shrprbck1r	100	78.732	Mastacembelus_armatus
ENSPFOG00000004214	shrprbck1r	80	61.538	ENSMAMG00000014645	sharpin	95	61.538	Mastacembelus_armatus
ENSPFOG00000004214	shrprbck1r	100	78.340	ENSMZEG00005021257	shrprbck1r	100	79.044	Maylandia_zebra
ENSPFOG00000004214	shrprbck1r	58	75.862	ENSMMOG00000016788	sharpin	86	75.862	Mola_mola
ENSPFOG00000004214	shrprbck1r	100	76.290	ENSMMOG00000003764	shrprbck1r	100	76.290	Mola_mola
ENSPFOG00000004214	shrprbck1r	96	80.118	ENSMALG00000008861	shrprbck1r	95	80.118	Monopterus_albus
ENSPFOG00000004214	shrprbck1r	80	61.538	ENSMALG00000020528	sharpin	96	61.538	Monopterus_albus
ENSPFOG00000004214	shrprbck1r	69	48.308	ENSNBRG00000012382	sharpin	91	48.308	Neolamprologus_brichardi
ENSPFOG00000004214	shrprbck1r	100	79.184	ENSNBRG00000002270	shrprbck1r	100	79.887	Neolamprologus_brichardi
ENSPFOG00000004214	shrprbck1r	81	54.167	ENSONIG00000009626	-	97	54.167	Oreochromis_niloticus
ENSPFOG00000004214	shrprbck1r	100	78.903	ENSONIG00000014401	shrprbck1r	100	79.606	Oreochromis_niloticus
ENSPFOG00000004214	shrprbck1r	89	53.953	ENSORLG00000017281	sharpin	95	53.953	Oryzias_latipes
ENSPFOG00000004214	shrprbck1r	100	79.126	ENSORLG00000007392	shrprbck1r	100	79.126	Oryzias_latipes
ENSPFOG00000004214	shrprbck1r	100	78.561	ENSORLG00020018619	shrprbck1r	100	78.561	Oryzias_latipes_hni
ENSPFOG00000004214	shrprbck1r	89	53.917	ENSORLG00020000801	sharpin	95	53.917	Oryzias_latipes_hni
ENSPFOG00000004214	shrprbck1r	100	78.420	ENSORLG00015018865	shrprbck1r	100	78.420	Oryzias_latipes_hsok
ENSPFOG00000004214	shrprbck1r	89	53.917	ENSORLG00015009860	sharpin	95	53.917	Oryzias_latipes_hsok
ENSPFOG00000004214	shrprbck1r	88	44.153	ENSOMEG00000005729	sharpin	88	67.742	Oryzias_melastigma
ENSPFOG00000004214	shrprbck1r	100	80.677	ENSOMEG00000012749	shrprbck1r	100	80.677	Oryzias_melastigma
ENSPFOG00000004214	shrprbck1r	100	58.144	ENSPKIG00000018308	-	99	58.144	Paramormyrops_kingsleyae
ENSPFOG00000004214	shrprbck1r	100	70.308	ENSPKIG00000006933	shrprbck1r	100	70.308	Paramormyrops_kingsleyae
ENSPFOG00000004214	shrprbck1r	100	73.588	ENSPMGG00000013254	shrprbck1r	100	73.588	Periophthalmus_magnuspinnatus
ENSPFOG00000004214	shrprbck1r	97	51.374	ENSPLAG00000000423	sharpin	99	51.374	Poecilia_latipinna
ENSPFOG00000004214	shrprbck1r	100	99.149	ENSPLAG00000020523	shrprbck1r	100	99.149	Poecilia_latipinna
ENSPFOG00000004214	shrprbck1r	100	96.312	ENSPMEG00000006877	shrprbck1r	100	96.312	Poecilia_mexicana
ENSPFOG00000004214	shrprbck1r	82	50.000	ENSPMEG00000023030	sharpin	89	50.000	Poecilia_mexicana
ENSPFOG00000004214	shrprbck1r	97	51.477	ENSPREG00000009702	sharpin	99	51.477	Poecilia_reticulata
ENSPFOG00000004214	shrprbck1r	100	94.468	ENSPREG00000014689	shrprbck1r	100	94.468	Poecilia_reticulata
ENSPFOG00000004214	shrprbck1r	100	78.762	ENSPNYG00000022601	shrprbck1r	100	79.466	Pundamilia_nyererei
ENSPFOG00000004214	shrprbck1r	81	54.688	ENSPNAG00000002911	sharpin	99	54.805	Pygocentrus_nattereri
ENSPFOG00000004214	shrprbck1r	100	67.400	ENSPNAG00000007847	shrprbck1r	100	67.847	Pygocentrus_nattereri
ENSPFOG00000004214	shrprbck1r	75	63.208	ENSSFOG00015014150	-	96	63.208	Scleropages_formosus
ENSPFOG00000004214	shrprbck1r	93	53.086	ENSSFOG00015004028	sharpin	99	54.582	Scleropages_formosus
ENSPFOG00000004214	shrprbck1r	100	77.531	ENSSMAG00000018085	shrprbck1r	100	77.809	Scophthalmus_maximus
ENSPFOG00000004214	shrprbck1r	89	44.218	ENSSDUG00000019039	sharpin	96	44.941	Seriola_dumerili
ENSPFOG00000004214	shrprbck1r	100	82.254	ENSSDUG00000002959	shrprbck1r	100	82.535	Seriola_dumerili
ENSPFOG00000004214	shrprbck1r	100	81.972	ENSSLDG00000009026	shrprbck1r	100	82.254	Seriola_lalandi_dorsalis
ENSPFOG00000004214	shrprbck1r	96	79.245	ENSSPAG00000016097	shrprbck1r	99	79.245	Stegastes_partitus
ENSPFOG00000004214	shrprbck1r	56	76.923	ENSSPAG00000021807	sharpin	89	76.923	Stegastes_partitus
ENSPFOG00000004214	shrprbck1r	88	53.066	ENSTRUG00000011046	sharpin	96	53.538	Takifugu_rubripes
ENSPFOG00000004214	shrprbck1r	100	74.860	ENSTRUG00000006949	shrprbck1r	100	75.562	Takifugu_rubripes
ENSPFOG00000004214	shrprbck1r	81	55.164	ENSTNIG00000008521	sharpin	94	55.164	Tetraodon_nigroviridis
ENSPFOG00000004214	shrprbck1r	100	92.351	ENSXCOG00000006701	shrprbck1r	100	92.351	Xiphophorus_couchianus
ENSPFOG00000004214	shrprbck1r	88	42.654	ENSXCOG00000015019	sharpin	96	42.891	Xiphophorus_couchianus
ENSPFOG00000004214	shrprbck1r	100	92.210	ENSXMAG00000018972	shrprbck1r	100	92.210	Xiphophorus_maculatus
ENSPFOG00000004214	shrprbck1r	97	50.955	ENSXMAG00000022076	sharpin	99	50.955	Xiphophorus_maculatus