EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000004442 (Gene tree)
Gene ID: 103151716
Gene Symbol: ptcd3
Alias: -
Full Name: pentatricopeptide repeat domain 3
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 15818 bases
Position: chrKI519899.1:580586-596403
Accession: 103151716
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000029036	PPR	PF01535.20	2.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000028074	-	1890	-	ENSPFOP00000029036	629 (aa)	-	A0A096MC95
ENSPFOT00000004820	-	2094	XM_007571908	ENSPFOP00000004811	667 (aa)	XP_007571970	A0A087XGA8

Gene Model

Click here to download ENSPFOG00000004442's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000004442's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000004442	ptcd3	94	73.102	ENSACIG00000022263	ptcd3	100	73.102	Amphilophus_citrinellus
ENSPFOG00000004442	ptcd3	100	70.814	ENSAOCG00000017186	ptcd3	96	70.814	Amphiprion_ocellaris
ENSPFOG00000004442	ptcd3	100	71.231	ENSAPEG00000016069	ptcd3	96	71.231	Amphiprion_percula
ENSPFOG00000004442	ptcd3	90	46.587	ENSAPLG00000005086	PTCD3	96	46.587	Anas_platyrhynchos
ENSPFOG00000004442	ptcd3	100	74.387	ENSACLG00000020653	ptcd3	98	74.387	Astatotilapia_calliptera
ENSPFOG00000004442	ptcd3	100	56.836	ENSAMXG00000011570	ptcd3	98	56.836	Astyanax_mexicanus
ENSPFOG00000004442	ptcd3	100	76.982	ENSCVAG00000020820	ptcd3	97	79.526	Cyprinodon_variegatus
ENSPFOG00000004442	ptcd3	89	82.425	ENSGAFG00000015291	ptcd3	94	82.777	Gambusia_affinis
ENSPFOG00000004442	ptcd3	100	74.693	ENSHBUG00000020056	ptcd3	98	74.693	Haplochromis_burtoni
ENSPFOG00000004442	ptcd3	100	68.244	ENSLBEG00000015349	ptcd3	98	68.244	Labrus_bergylta
ENSPFOG00000004442	ptcd3	100	74.540	ENSMZEG00005004980	ptcd3	98	74.540	Maylandia_zebra
ENSPFOG00000004442	ptcd3	94	44.318	ENSMGAG00000013124	PTCD3	97	44.590	Meleagris_gallopavo
ENSPFOG00000004442	ptcd3	100	70.840	ENSMALG00000013282	ptcd3	98	70.840	Monopterus_albus
ENSPFOG00000004442	ptcd3	94	72.373	ENSNBRG00000000447	ptcd3	100	72.373	Neolamprologus_brichardi
ENSPFOG00000004442	ptcd3	100	74.540	ENSONIG00000015886	ptcd3	97	75.806	Oreochromis_niloticus
ENSPFOG00000004442	ptcd3	100	72.350	ENSORLG00000008776	ptcd3	100	72.657	Oryzias_latipes
ENSPFOG00000004442	ptcd3	100	71.889	ENSORLG00020020676	ptcd3	97	72.197	Oryzias_latipes_hni
ENSPFOG00000004442	ptcd3	90	59.766	ENSORLG00015015978	ptcd3	99	59.766	Oryzias_latipes_hsok
ENSPFOG00000004442	ptcd3	92	91.040	ENSPLAG00000021401	ptcd3	100	91.040	Poecilia_latipinna
ENSPFOG00000004442	ptcd3	92	89.420	ENSPMEG00000007153	ptcd3	100	89.590	Poecilia_mexicana
ENSPFOG00000004442	ptcd3	100	52.246	ENSSFOG00015019643	ptcd3	96	54.530	Scleropages_formosus
ENSPFOG00000004442	ptcd3	84	50.000	ENSTGUG00000010760	PTCD3	100	50.000	Taeniopygia_guttata
ENSPFOG00000004442	ptcd3	100	63.354	ENSTRUG00000003939	ptcd3	98	63.354	Takifugu_rubripes