EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSPFOG00000004469 (Gene tree)
Gene ID: 103131441
Gene Symbol: upf1
Alias: -
Full Name: senataxin
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 22029 bases
Position: chrKI520371.1:61782-83810
Accession: 103131441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000004560	UPF1_Zn_bind	PF09416.10	8.9e-75	1	1
ENSPFOP00000004560	ResIII	PF04851.15	6.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000004568	-	6299	-	ENSPFOP00000004560	1107 (aa)	XP_016522136	A0A087XFK7

Gene Model

Click here to download ENSPFOG00000004469's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000004469's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000004469	upf1	100	90.279	ENSPFOG00000000673	-	100	90.909