EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000004483 (Gene tree)
Gene ID: 103139623
Gene Symbol: TSR1
Alias: -
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 18917 bases
Position: chrKI519673.1:708671-727587
Accession: 25542
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000024329	AARP2CN	PF08142.12	2e-20	1	1
ENSPFOP00000004608	AARP2CN	PF08142.12	2.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000031164	TSR1-202	2564	-	ENSPFOP00000024329	826 (aa)	-	A0A096LYT8
ENSPFOT00000004616	TSR1-201	3017	-	ENSPFOP00000004608	829 (aa)	-	A0A087XFQ5

Gene Model

Click here to download ENSPFOG00000004483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000004483's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000004483	TSR1	99	56.000	ENSG00000167721	TSR1	99	54.909	Homo_sapiens
ENSPFOG00000004483	TSR1	100	84.726	ENSAPOG00000020891	tsr1	100	83.532	Acanthochromis_polyacanthus
ENSPFOG00000004483	TSR1	99	54.655	ENSAMEG00000007599	TSR1	99	53.650	Ailuropoda_melanoleuca
ENSPFOG00000004483	TSR1	100	82.203	ENSACIG00000007090	tsr1	100	81.719	Amphilophus_citrinellus
ENSPFOG00000004483	TSR1	100	83.213	ENSAOCG00000023284	tsr1	100	83.213	Amphiprion_ocellaris
ENSPFOG00000004483	TSR1	92	83.968	ENSAPEG00000008452	tsr1	100	82.625	Amphiprion_percula
ENSPFOG00000004483	TSR1	100	82.578	ENSATEG00000021961	tsr1	100	82.936	Anabas_testudineus
ENSPFOG00000004483	TSR1	90	59.329	ENSAPLG00000013422	TSR1	98	58.121	Anas_platyrhynchos
ENSPFOG00000004483	TSR1	71	50.924	ENSACAG00000000859	TSR1	92	50.168	Anolis_carolinensis
ENSPFOG00000004483	TSR1	99	55.718	ENSANAG00000031071	TSR1	99	54.982	Aotus_nancymaae
ENSPFOG00000004483	TSR1	100	85.078	ENSACLG00000007595	tsr1	99	83.273	Astatotilapia_calliptera
ENSPFOG00000004483	TSR1	51	72.554	ENSAMXG00000008470	tsr1	89	72.554	Astyanax_mexicanus
ENSPFOG00000004483	TSR1	99	56.242	ENSBTAG00000004225	TSR1	92	55.078	Bos_taurus
ENSPFOG00000004483	TSR1	97	40.636	WBGene00006497	tag-151	97	41.026	Caenorhabditis_elegans
ENSPFOG00000004483	TSR1	99	54.745	ENSCJAG00000012456	TSR1	99	53.650	Callithrix_jacchus
ENSPFOG00000004483	TSR1	99	55.772	ENSCAFG00000002106	-	92	54.242	Canis_familiaris
ENSPFOG00000004483	TSR1	89	53.826	ENSCAFG00000019273	-	97	55.244	Canis_familiaris
ENSPFOG00000004483	TSR1	99	55.772	ENSCAFG00020009728	TSR1	99	54.313	Canis_lupus_dingo
ENSPFOG00000004483	TSR1	99	57.108	ENSCHIG00000023935	TSR1	99	55.407	Capra_hircus
ENSPFOG00000004483	TSR1	99	56.448	ENSTSYG00000005468	TSR1	99	55.109	Carlito_syrichta
ENSPFOG00000004483	TSR1	92	55.366	ENSCPOG00000014833	TSR1	92	54.207	Cavia_porcellus
ENSPFOG00000004483	TSR1	92	54.843	ENSCCAG00000028962	TSR1	98	53.665	Cebus_capucinus
ENSPFOG00000004483	TSR1	98	55.774	ENSCATG00000044262	TSR1	98	55.037	Cercocebus_atys
ENSPFOG00000004483	TSR1	99	55.839	ENSCLAG00000005567	TSR1	99	54.866	Chinchilla_lanigera
ENSPFOG00000004483	TSR1	98	55.897	ENSCSAG00000013788	TSR1	98	55.160	Chlorocebus_sabaeus
ENSPFOG00000004483	TSR1	98	55.324	ENSCPBG00000020363	TSR1	97	54.490	Chrysemys_picta_bellii
ENSPFOG00000004483	TSR1	96	46.022	ENSCING00000020658	-	99	45.499	Ciona_intestinalis
ENSPFOG00000004483	TSR1	96	45.682	ENSCSAVG00000001875	-	100	45.113	Ciona_savignyi
ENSPFOG00000004483	TSR1	98	50.246	ENSCANG00000033056	TSR1	98	51.222	Colobus_angolensis_palliatus
ENSPFOG00000004483	TSR1	99	55.043	ENSCGRG00001023942	Tsr1	99	54.435	Cricetulus_griseus_chok1gshd
ENSPFOG00000004483	TSR1	99	51.523	ENSCGRG00000013015	Tsr1	91	50.458	Cricetulus_griseus_crigri
ENSPFOG00000004483	TSR1	100	77.524	ENSCSEG00000013009	tsr1	100	77.284	Cynoglossus_semilaevis
ENSPFOG00000004483	TSR1	100	87.711	ENSCVAG00000000506	tsr1	100	87.229	Cyprinodon_variegatus
ENSPFOG00000004483	TSR1	99	74.517	ENSDARG00000007744	tsr1	99	74.578	Danio_rerio
ENSPFOG00000004483	TSR1	99	56.691	ENSDNOG00000004715	TSR1	99	57.020	Dasypus_novemcinctus
ENSPFOG00000004483	TSR1	96	49.496	ENSDORG00000023234	-	99	47.512	Dipodomys_ordii
ENSPFOG00000004483	TSR1	99	55.164	ENSDORG00000016371	-	99	53.949	Dipodomys_ordii
ENSPFOG00000004483	TSR1	96	44.815	FBgn0037073	Tsr1	90	44.589	Drosophila_melanogaster
ENSPFOG00000004483	TSR1	87	67.869	ENSETEG00000017534	TSR1	88	67.213	Echinops_telfairi
ENSPFOG00000004483	TSR1	94	52.339	ENSEBUG00000013731	TSR1	97	50.379	Eptatretus_burgeri
ENSPFOG00000004483	TSR1	99	56.744	ENSEASG00005009302	TSR1	97	55.231	Equus_asinus_asinus
ENSPFOG00000004483	TSR1	99	56.691	ENSECAG00000009114	TSR1	99	55.177	Equus_caballus
ENSPFOG00000004483	TSR1	100	73.810	ENSELUG00000020984	tsr1	96	73.810	Esox_lucius
ENSPFOG00000004483	TSR1	99	55.786	ENSFCAG00000006313	TSR1	99	54.689	Felis_catus
ENSPFOG00000004483	TSR1	99	59.102	ENSFALG00000006532	TSR1	99	58.738	Ficedula_albicollis
ENSPFOG00000004483	TSR1	99	55.420	ENSFDAG00000006038	TSR1	99	54.933	Fukomys_damarensis
ENSPFOG00000004483	TSR1	100	87.709	ENSFHEG00000003626	tsr1	99	87.232	Fundulus_heteroclitus
ENSPFOG00000004483	TSR1	100	72.169	ENSGMOG00000010336	tsr1	100	71.566	Gadus_morhua
ENSPFOG00000004483	TSR1	100	95.694	ENSGAFG00000012993	tsr1	99	95.694	Gambusia_affinis
ENSPFOG00000004483	TSR1	100	80.649	ENSGACG00000010843	tsr1	100	80.288	Gasterosteus_aculeatus
ENSPFOG00000004483	TSR1	98	55.814	ENSGAGG00000025619	-	99	54.490	Gopherus_agassizii
ENSPFOG00000004483	TSR1	99	56.242	ENSGGOG00000001704	TSR1	99	55.152	Gorilla_gorilla
ENSPFOG00000004483	TSR1	100	84.053	ENSHBUG00000017904	tsr1	100	82.625	Haplochromis_burtoni
ENSPFOG00000004483	TSR1	96	48.744	ENSHGLG00000015688	-	93	48.110	Heterocephalus_glaber_female
ENSPFOG00000004483	TSR1	99	55.718	ENSHGLG00000012806	-	99	54.623	Heterocephalus_glaber_female
ENSPFOG00000004483	TSR1	99	55.718	ENSHGLG00100015392	TSR1	99	54.623	Heterocephalus_glaber_male
ENSPFOG00000004483	TSR1	100	78.571	ENSHCOG00000001432	tsr1	100	78.450	Hippocampus_comes
ENSPFOG00000004483	TSR1	100	73.182	ENSIPUG00000004618	tsr1	100	72.586	Ictalurus_punctatus
ENSPFOG00000004483	TSR1	99	56.326	ENSSTOG00000011819	TSR1	99	55.596	Ictidomys_tridecemlineatus
ENSPFOG00000004483	TSR1	91	54.762	ENSJJAG00000019505	Tsr1	95	52.848	Jaculus_jaculus
ENSPFOG00000004483	TSR1	100	82.122	ENSKMAG00000005763	tsr1	99	82.792	Kryptolebias_marmoratus
ENSPFOG00000004483	TSR1	100	81.938	ENSLBEG00000021823	tsr1	99	81.938	Labrus_bergylta
ENSPFOG00000004483	TSR1	100	57.399	ENSLACG00000002197	TSR1	100	56.699	Latimeria_chalumnae
ENSPFOG00000004483	TSR1	90	74.667	ENSLOCG00000006491	TSR1	99	74.667	Lepisosteus_oculatus
ENSPFOG00000004483	TSR1	98	56.020	ENSMFAG00000021330	TSR1	98	55.283	Macaca_fascicularis
ENSPFOG00000004483	TSR1	98	55.897	ENSMMUG00000017519	TSR1	98	55.160	Macaca_mulatta
ENSPFOG00000004483	TSR1	98	56.020	ENSMNEG00000031382	TSR1	98	55.283	Macaca_nemestrina
ENSPFOG00000004483	TSR1	98	55.774	ENSMLEG00000036733	TSR1	98	55.037	Mandrillus_leucophaeus
ENSPFOG00000004483	TSR1	100	81.094	ENSMAMG00000017918	tsr1	91	82.115	Mastacembelus_armatus
ENSPFOG00000004483	TSR1	100	84.135	ENSMZEG00005007477	tsr1	100	83.413	Maylandia_zebra
ENSPFOG00000004483	TSR1	99	57.646	ENSMGAG00000005576	TSR1	99	57.039	Meleagris_gallopavo
ENSPFOG00000004483	TSR1	99	56.760	ENSMICG00000012943	TSR1	99	55.664	Microcebus_murinus
ENSPFOG00000004483	TSR1	99	55.043	ENSMOCG00000022764	Tsr1	99	53.584	Microtus_ochrogaster
ENSPFOG00000004483	TSR1	100	83.656	ENSMMOG00000014280	tsr1	100	83.172	Mola_mola
ENSPFOG00000004483	TSR1	98	56.410	ENSMODG00000010658	TSR1	99	55.637	Monodelphis_domestica
ENSPFOG00000004483	TSR1	100	82.754	ENSMALG00000011681	tsr1	100	82.515	Monopterus_albus
ENSPFOG00000004483	TSR1	99	55.273	MGP_CAROLIEiJ_G0016727	Tsr1	99	53.528	Mus_caroli
ENSPFOG00000004483	TSR1	99	55.879	ENSMUSG00000038335	Tsr1	99	54.136	Mus_musculus
ENSPFOG00000004483	TSR1	99	56.121	MGP_PahariEiJ_G0017864	Tsr1	99	54.501	Mus_pahari
ENSPFOG00000004483	TSR1	99	56.000	MGP_SPRETEiJ_G0017570	Tsr1	99	54.258	Mus_spretus
ENSPFOG00000004483	TSR1	81	58.098	ENSMPUG00000013000	TSR1	100	56.315	Mustela_putorius_furo
ENSPFOG00000004483	TSR1	98	57.143	ENSMLUG00000003505	TSR1	99	55.800	Myotis_lucifugus
ENSPFOG00000004483	TSR1	100	84.671	ENSNBRG00000020728	tsr1	99	82.874	Neolamprologus_brichardi
ENSPFOG00000004483	TSR1	99	51.883	ENSNLEG00000017184	TSR1	99	65.330	Nomascus_leucogenys
ENSPFOG00000004483	TSR1	99	52.530	ENSMEUG00000015828	TSR1	99	52.289	Notamacropus_eugenii
ENSPFOG00000004483	TSR1	100	83.075	ENSONIG00000013131	tsr1	100	83.012	Oreochromis_niloticus
ENSPFOG00000004483	TSR1	95	53.701	ENSOANG00000008637	TSR1	51	48.052	Ornithorhynchus_anatinus
ENSPFOG00000004483	TSR1	98	56.951	ENSOCUG00000014256	TSR1	92	55.671	Oryctolagus_cuniculus
ENSPFOG00000004483	TSR1	100	81.152	ENSORLG00000004926	tsr1	99	80.792	Oryzias_latipes
ENSPFOG00000004483	TSR1	100	81.250	ENSORLG00020008792	tsr1	99	80.889	Oryzias_latipes_hni
ENSPFOG00000004483	TSR1	100	81.633	ENSORLG00015013838	tsr1	99	81.273	Oryzias_latipes_hsok
ENSPFOG00000004483	TSR1	100	82.353	ENSOMEG00000004830	tsr1	99	81.873	Oryzias_melastigma
ENSPFOG00000004483	TSR1	99	54.578	ENSOGAG00000004492	TSR1	99	54.217	Otolemur_garnettii
ENSPFOG00000004483	TSR1	99	57.230	ENSOARG00000015437	TSR1	89	55.599	Ovis_aries
ENSPFOG00000004483	TSR1	99	56.000	ENSPPAG00000036355	TSR1	99	54.909	Pan_paniscus
ENSPFOG00000004483	TSR1	99	55.664	ENSPPRG00000015519	-	99	54.568	Panthera_pardus
ENSPFOG00000004483	TSR1	99	55.664	ENSPTIG00000010608	TSR1	99	54.568	Panthera_tigris_altaica
ENSPFOG00000004483	TSR1	99	56.000	ENSPTRG00000008547	TSR1	99	54.909	Pan_troglodytes
ENSPFOG00000004483	TSR1	98	53.137	ENSPANG00000024463	TSR1	98	53.137	Papio_anubis
ENSPFOG00000004483	TSR1	100	71.480	ENSPKIG00000013972	tsr1	100	70.638	Paramormyrops_kingsleyae
ENSPFOG00000004483	TSR1	87	56.033	ENSPSIG00000018258	TSR1	99	54.633	Pelodiscus_sinensis
ENSPFOG00000004483	TSR1	99	79.879	ENSPMGG00000011577	tsr1	99	78.762	Periophthalmus_magnuspinnatus
ENSPFOG00000004483	TSR1	99	54.623	ENSPEMG00000018033	Tsr1	99	53.041	Peromyscus_maniculatus_bairdii
ENSPFOG00000004483	TSR1	99	56.558	ENSPCIG00000009357	TSR1	97	56.077	Phascolarctos_cinereus
ENSPFOG00000004483	TSR1	100	98.445	ENSPLAG00000022320	tsr1	99	98.445	Poecilia_latipinna
ENSPFOG00000004483	TSR1	100	97.967	ENSPMEG00000004577	tsr1	99	97.967	Poecilia_mexicana
ENSPFOG00000004483	TSR1	97	96.319	ENSPREG00000010354	tsr1	97	97.143	Poecilia_reticulata
ENSPFOG00000004483	TSR1	99	50.905	ENSPPYG00000007792	TSR1	99	50.302	Pongo_abelii
ENSPFOG00000004483	TSR1	52	62.791	ENSPCAG00000012973	-	70	69.444	Procavia_capensis
ENSPFOG00000004483	TSR1	99	56.098	ENSPCOG00000017928	TSR1	92	55.339	Propithecus_coquereli
ENSPFOG00000004483	TSR1	99	55.839	ENSPVAG00000002162	TSR1	99	55.109	Pteropus_vampyrus
ENSPFOG00000004483	TSR1	100	85.319	ENSPNYG00000016163	tsr1	99	83.514	Pundamilia_nyererei
ENSPFOG00000004483	TSR1	99	73.540	ENSPNAG00000008659	tsr1	99	73.063	Pygocentrus_nattereri
ENSPFOG00000004483	TSR1	99	54.501	ENSRNOG00000002980	Tsr1	99	53.771	Rattus_norvegicus
ENSPFOG00000004483	TSR1	99	55.515	ENSRBIG00000040016	TSR1	99	54.909	Rhinopithecus_bieti
ENSPFOG00000004483	TSR1	99	55.394	ENSRROG00000030361	TSR1	99	54.788	Rhinopithecus_roxellana
ENSPFOG00000004483	TSR1	96	30.750	YDL060W	-	98	30.270	Saccharomyces_cerevisiae
ENSPFOG00000004483	TSR1	99	55.394	ENSSBOG00000020785	TSR1	99	54.779	Saimiri_boliviensis_boliviensis
ENSPFOG00000004483	TSR1	99	56.695	ENSSHAG00000011394	TSR1	99	55.932	Sarcophilus_harrisii
ENSPFOG00000004483	TSR1	100	72.518	ENSSFOG00015005455	tsr1	100	72.518	Scleropages_formosus
ENSPFOG00000004483	TSR1	100	80.359	ENSSMAG00000009504	tsr1	100	80.622	Scophthalmus_maximus
ENSPFOG00000004483	TSR1	100	81.087	ENSSDUG00000012074	tsr1	99	82.697	Seriola_dumerili
ENSPFOG00000004483	TSR1	100	80.756	ENSSLDG00000002031	tsr1	99	83.612	Seriola_lalandi_dorsalis
ENSPFOG00000004483	TSR1	92	57.200	ENSSARG00000000759	TSR1	93	57.200	Sorex_araneus
ENSPFOG00000004483	TSR1	99	56.917	ENSSPUG00000007042	TSR1	99	56.053	Sphenodon_punctatus
ENSPFOG00000004483	TSR1	100	84.487	ENSSPAG00000021951	tsr1	100	83.890	Stegastes_partitus
ENSPFOG00000004483	TSR1	99	57.056	ENSSSCG00000038534	TSR1	99	55.596	Sus_scrofa
ENSPFOG00000004483	TSR1	90	60.375	ENSTGUG00000005883	TSR1	100	59.572	Taeniopygia_guttata
ENSPFOG00000004483	TSR1	100	80.987	ENSTRUG00000004665	tsr1	100	81.062	Takifugu_rubripes
ENSPFOG00000004483	TSR1	99	82.051	ENSTNIG00000016196	tsr1	100	81.563	Tetraodon_nigroviridis
ENSPFOG00000004483	TSR1	66	70.000	ENSTBEG00000015275	-	66	70.000	Tupaia_belangeri
ENSPFOG00000004483	TSR1	99	57.403	ENSTTRG00000001177	TSR1	92	55.411	Tursiops_truncatus
ENSPFOG00000004483	TSR1	99	55.043	ENSUAMG00000025160	TSR1	99	53.893	Ursus_americanus
ENSPFOG00000004483	TSR1	96	55.207	ENSUMAG00000009294	TSR1	98	53.401	Ursus_maritimus
ENSPFOG00000004483	TSR1	83	51.664	ENSVPAG00000000228	TSR1	99	49.003	Vicugna_pacos
ENSPFOG00000004483	TSR1	99	55.772	ENSVVUG00000021767	TSR1	92	54.370	Vulpes_vulpes
ENSPFOG00000004483	TSR1	100	53.405	ENSXETG00000023797	tsr1	100	53.110	Xenopus_tropicalis
ENSPFOG00000004483	TSR1	100	93.947	ENSXCOG00000009635	tsr1	100	92.736	Xiphophorus_couchianus
ENSPFOG00000004483	TSR1	100	92.566	ENSXMAG00000001397	tsr1	97	91.966	Xiphophorus_maculatus