EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000004746 (Gene tree)
Gene ID: 103155910
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: ras-related protein Rab-35-like
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 9242 bases
Position: chrKI520065.1:301701-310942
Accession: 103155910
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000004645	MMR_HSR1	PF01926.23	4.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000004654	-	2384	-	ENSPFOP00000004645	209 (aa)	XP_016519402	A0A087XFU2

Gene Model

Click here to download ENSPFOG00000004746's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000004746's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000004746	si:dkey-16l2.16	87	47.802	ENSPFOG00000014418	-	91	47.802
ENSPFOG00000004746	si:dkey-16l2.16	53	33.628	ENSPFOG00000024387	rras2	66	33.628
ENSPFOG00000004746	si:dkey-16l2.16	74	44.379	ENSPFOG00000000349	rab33ba	70	44.379
ENSPFOG00000004746	si:dkey-16l2.16	80	38.150	ENSPFOG00000003465	RAB7A	83	38.150
ENSPFOG00000004746	si:dkey-16l2.16	79	31.492	ENSPFOG00000003006	rasl11a	69	31.492
ENSPFOG00000004746	si:dkey-16l2.16	76	45.732	ENSPFOG00000009101	-	70	45.732
ENSPFOG00000004746	si:dkey-16l2.16	96	35.821	ENSPFOG00000012082	rab5c	89	37.313
ENSPFOG00000004746	si:dkey-16l2.16	72	30.061	ENSPFOG00000003241	arl1	83	30.061
ENSPFOG00000004746	si:dkey-16l2.16	91	36.123	ENSPFOG00000013491	rab18b	92	36.123
ENSPFOG00000004746	si:dkey-16l2.16	78	34.940	ENSPFOG00000004921	rheb	89	34.940
ENSPFOG00000004746	si:dkey-16l2.16	80	40.237	ENSPFOG00000014630	rab4a	79	40.237
ENSPFOG00000004746	si:dkey-16l2.16	96	35.885	ENSPFOG00000024704	rab9a	97	35.885
ENSPFOG00000004746	si:dkey-16l2.16	81	45.349	ENSPFOG00000004838	rab42a	65	45.349
ENSPFOG00000004746	si:dkey-16l2.16	98	38.462	ENSPFOG00000011316	rab11al	96	38.462
ENSPFOG00000004746	si:dkey-16l2.16	78	35.542	ENSPFOG00000002595	hrasb	87	35.542
ENSPFOG00000004746	si:dkey-16l2.16	76	41.509	ENSPFOG00000005901	-	88	37.313
ENSPFOG00000004746	si:dkey-16l2.16	81	37.143	ENSPFOG00000020060	rab9b	86	37.143
ENSPFOG00000004746	si:dkey-16l2.16	77	61.111	ENSPFOG00000012594	rab1ba	76	61.111
ENSPFOG00000004746	si:dkey-16l2.16	99	32.558	ENSPFOG00000011444	rab34b	82	32.558
ENSPFOG00000004746	si:dkey-16l2.16	84	58.791	ENSPFOG00000000498	-	88	58.791
ENSPFOG00000004746	si:dkey-16l2.16	55	31.034	ENSPFOG00000012426	arl3	58	31.034
ENSPFOG00000004746	si:dkey-16l2.16	78	46.341	ENSPFOG00000007571	rab18a	80	46.341
ENSPFOG00000004746	si:dkey-16l2.16	74	33.766	ENSPFOG00000011493	rab23	74	33.143
ENSPFOG00000004746	si:dkey-16l2.16	83	31.250	ENSPFOG00000001515	rhebl1	93	31.250
ENSPFOG00000004746	si:dkey-16l2.16	75	46.012	ENSPFOG00000004037	rab33a	58	46.012
ENSPFOG00000004746	si:dkey-16l2.16	84	30.168	ENSPFOG00000020516	rasd4	86	30.168
ENSPFOG00000004746	si:dkey-16l2.16	78	36.686	ENSPFOG00000013066	RAB29	79	36.686
ENSPFOG00000004746	si:dkey-16l2.16	98	40.191	ENSPFOG00000024114	-	96	40.191
ENSPFOG00000004746	si:dkey-16l2.16	76	44.025	ENSPFOG00000011263	rab5aa	74	44.025
ENSPFOG00000004746	si:dkey-16l2.16	55	30.172	ENSPFOG00000005789	arl3l2	59	30.172
ENSPFOG00000004746	si:dkey-16l2.16	55	31.034	ENSPFOG00000012486	arl3	61	31.034
ENSPFOG00000004746	si:dkey-16l2.16	77	38.509	ENSPFOG00000012977	rab22a	83	38.509
ENSPFOG00000004746	si:dkey-16l2.16	80	41.860	ENSPFOG00000014499	si:dkey-34d22.5	77	41.860
ENSPFOG00000004746	si:dkey-16l2.16	77	63.580	ENSPFOG00000001829	rab1ab	80	63.580
ENSPFOG00000004746	si:dkey-16l2.16	98	40.191	ENSPFOG00000006159	rab11ba	96	40.191
ENSPFOG00000004746	si:dkey-16l2.16	78	42.073	ENSPFOG00000019821	RAB14	76	42.073
ENSPFOG00000004746	si:dkey-16l2.16	73	42.208	ENSPFOG00000011424	RAB41	73	42.208
ENSPFOG00000004746	si:dkey-16l2.16	98	41.346	ENSPFOG00000009284	rab11a	96	41.346
ENSPFOG00000004746	si:dkey-16l2.16	80	41.667	ENSPFOG00000010632	rab25a	78	41.667
ENSPFOG00000004746	si:dkey-16l2.16	74	32.919	ENSPFOG00000006335	dnajc27	59	32.919
ENSPFOG00000004746	si:dkey-16l2.16	58	30.657	ENSPFOG00000003764	arfrp1	66	30.657
ENSPFOG00000004746	si:dkey-16l2.16	98	40.097	ENSPFOG00000011310	rab25b	96	40.097
ENSPFOG00000004746	si:dkey-16l2.16	76	33.742	ENSPFOG00000008678	si:cabz01085950.1	81	33.742
ENSPFOG00000004746	si:dkey-16l2.16	77	40.854	ENSPFOG00000019509	rab6a	79	40.854
ENSPFOG00000004746	si:dkey-16l2.16	74	40.000	ENSPFOG00000013027	rab22a	95	40.000
ENSPFOG00000004746	si:dkey-16l2.16	99	69.082	ENSPFOG00000006655	rab35b	99	69.082
ENSPFOG00000004746	si:dkey-16l2.16	82	40.462	ENSPFOG00000001579	rab12	71	40.462
ENSPFOG00000004746	si:dkey-16l2.16	96	35.821	ENSPFOG00000023458	rab5c	89	37.313
ENSPFOG00000004746	si:dkey-16l2.16	79	37.059	ENSPFOG00000015409	si:dkey-13a21.4	83	37.059
ENSPFOG00000004746	si:dkey-16l2.16	85	45.506	ENSPFOG00000005479	rab30	88	45.506
ENSPFOG00000004746	si:dkey-16l2.16	96	35.266	ENSPFOG00000022477	-	89	35.266
ENSPFOG00000004746	si:dkey-16l2.16	78	44.172	ENSPFOG00000001167	-	76	44.172
ENSPFOG00000004746	si:dkey-16l2.16	80	38.150	ENSPFOG00000003934	-	83	38.150
ENSPFOG00000004746	si:dkey-16l2.16	84	48.588	ENSPFOG00000017775	rab15	83	48.588
ENSPFOG00000004746	si:dkey-16l2.16	98	40.191	ENSPFOG00000006224	-	96	40.191
ENSPFOG00000004746	si:dkey-16l2.16	73	34.868	ENSPFOG00000017960	rabl2	68	34.868
ENSPFOG00000004746	si:dkey-16l2.16	77	34.568	ENSPFOG00000015499	kras	85	34.568
ENSPFOG00000004746	si:dkey-16l2.16	79	44.643	ENSPFOG00000004684	-	79	44.643
ENSPFOG00000004746	si:dkey-16l2.16	84	45.198	ENSPFOG00000013182	RAB15	84	45.198
ENSPFOG00000004746	si:dkey-16l2.16	95	30.198	ENSPFOG00000008890	rras	84	30.198
ENSPFOG00000004746	si:dkey-16l2.16	69	45.395	ENSPFOG00000022360	-	63	45.395
ENSPFOG00000004746	si:dkey-16l2.16	77	64.198	ENSPFOG00000013810	zgc:171927	75	64.198
ENSPFOG00000004746	si:dkey-16l2.16	79	44.048	ENSPFOG00000004492	RAB39B	79	44.048
ENSPFOG00000004746	si:dkey-16l2.16	80	41.420	ENSPFOG00000006314	-	69	41.420
ENSPFOG00000004746	si:dkey-16l2.16	77	41.212	ENSPFOG00000003742	rab6ba	79	41.212
ENSPFOG00000004746	si:dkey-16l2.16	80	41.420	ENSPFOG00000019144	-	69	41.420
ENSPFOG00000004746	si:dkey-16l2.16	98	36.667	ENSPFOG00000004786	rab2a	99	36.667
ENSPFOG00000004746	si:dkey-16l2.16	95	35.096	ENSPFOG00000008547	rab34a	66	35.096

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000004746	si:dkey-16l2.16	100	87.081	ENSAPOG00000008263	si:dkey-16l2.16	100	87.081	Acanthochromis_polyacanthus
ENSPFOG00000004746	si:dkey-16l2.16	100	88.517	ENSAOCG00000016825	si:dkey-16l2.16	100	88.517	Amphiprion_ocellaris
ENSPFOG00000004746	si:dkey-16l2.16	100	88.517	ENSAPEG00000006500	si:dkey-16l2.16	100	88.517	Amphiprion_percula
ENSPFOG00000004746	si:dkey-16l2.16	100	88.517	ENSATEG00000019238	si:dkey-16l2.16	100	88.517	Anabas_testudineus
ENSPFOG00000004746	si:dkey-16l2.16	100	88.995	ENSACLG00000018721	si:dkey-16l2.16	100	88.995	Astatotilapia_calliptera
ENSPFOG00000004746	si:dkey-16l2.16	100	87.560	ENSAMXG00000038243	si:dkey-16l2.16	94	96.610	Astyanax_mexicanus
ENSPFOG00000004746	si:dkey-16l2.16	56	96.610	ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	Cynoglossus_semilaevis
ENSPFOG00000004746	si:dkey-16l2.16	100	92.344	ENSCVAG00000003537	si:dkey-16l2.16	100	92.344	Cyprinodon_variegatus
ENSPFOG00000004746	si:dkey-16l2.16	100	86.603	ENSDARG00000037967	si:dkey-16l2.16	99	95.763	Danio_rerio
ENSPFOG00000004746	si:dkey-16l2.16	99	82.212	ENSELUG00000023247	si:dkey-16l2.16	99	82.212	Esox_lucius
ENSPFOG00000004746	si:dkey-16l2.16	58	94.215	ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	Fundulus_heteroclitus
ENSPFOG00000004746	si:dkey-16l2.16	77	84.472	ENSGMOG00000015174	si:dkey-16l2.16	98	84.472	Gadus_morhua
ENSPFOG00000004746	si:dkey-16l2.16	100	99.043	ENSGAFG00000005388	si:dkey-16l2.16	100	99.043	Gambusia_affinis
ENSPFOG00000004746	si:dkey-16l2.16	100	87.081	ENSGACG00000014915	si:dkey-16l2.16	98	87.081	Gasterosteus_aculeatus
ENSPFOG00000004746	si:dkey-16l2.16	100	89.474	ENSHBUG00000019261	si:dkey-16l2.16	100	89.474	Haplochromis_burtoni
ENSPFOG00000004746	si:dkey-16l2.16	100	87.560	ENSHCOG00000006538	si:dkey-16l2.16	100	87.560	Hippocampus_comes
ENSPFOG00000004746	si:dkey-16l2.16	100	87.081	ENSKMAG00000003494	si:dkey-16l2.16	100	87.081	Kryptolebias_marmoratus
ENSPFOG00000004746	si:dkey-16l2.16	100	88.995	ENSLBEG00000007681	si:dkey-16l2.16	100	88.995	Labrus_bergylta
ENSPFOG00000004746	si:dkey-16l2.16	100	88.995	ENSMAMG00000019230	si:dkey-16l2.16	100	88.995	Mastacembelus_armatus
ENSPFOG00000004746	si:dkey-16l2.16	100	88.995	ENSMZEG00005002081	si:dkey-16l2.16	100	88.995	Maylandia_zebra
ENSPFOG00000004746	si:dkey-16l2.16	99	88.350	ENSMMOG00000020140	si:dkey-16l2.16	97	88.350	Mola_mola
ENSPFOG00000004746	si:dkey-16l2.16	100	88.038	ENSMALG00000014727	si:dkey-16l2.16	99	88.038	Monopterus_albus
ENSPFOG00000004746	si:dkey-16l2.16	100	88.517	ENSNBRG00000008930	si:dkey-16l2.16	100	88.517	Neolamprologus_brichardi
ENSPFOG00000004746	si:dkey-16l2.16	100	88.995	ENSONIG00000009443	si:dkey-16l2.16	100	88.995	Oreochromis_niloticus
ENSPFOG00000004746	si:dkey-16l2.16	100	85.167	ENSORLG00000001098	si:dkey-16l2.16	99	85.167	Oryzias_latipes
ENSPFOG00000004746	si:dkey-16l2.16	100	85.167	ENSORLG00020000867	si:dkey-16l2.16	99	85.167	Oryzias_latipes_hni
ENSPFOG00000004746	si:dkey-16l2.16	100	85.646	ENSOMEG00000015474	si:dkey-16l2.16	100	86.603	Oryzias_melastigma
ENSPFOG00000004746	si:dkey-16l2.16	100	85.646	ENSPKIG00000005686	-	100	85.646	Paramormyrops_kingsleyae
ENSPFOG00000004746	si:dkey-16l2.16	100	76.077	ENSPKIG00000018888	si:dkey-16l2.16	100	76.077	Paramormyrops_kingsleyae
ENSPFOG00000004746	si:dkey-16l2.16	100	88.038	ENSPMGG00000000751	si:dkey-16l2.16	100	88.038	Periophthalmus_magnuspinnatus
ENSPFOG00000004746	si:dkey-16l2.16	100	99.522	ENSPLAG00000021043	si:dkey-16l2.16	100	99.522	Poecilia_latipinna
ENSPFOG00000004746	si:dkey-16l2.16	100	100.000	ENSPMEG00000007165	si:dkey-16l2.16	100	100.000	Poecilia_mexicana
ENSPFOG00000004746	si:dkey-16l2.16	100	99.522	ENSPREG00000005323	si:dkey-16l2.16	100	99.522	Poecilia_reticulata
ENSPFOG00000004746	si:dkey-16l2.16	100	89.474	ENSPNYG00000009490	si:dkey-16l2.16	100	89.474	Pundamilia_nyererei
ENSPFOG00000004746	si:dkey-16l2.16	100	88.038	ENSPNAG00000018986	si:dkey-16l2.16	100	88.038	Pygocentrus_nattereri
ENSPFOG00000004746	si:dkey-16l2.16	99	77.404	ENSSFOG00015006414	-	99	77.404	Scleropages_formosus
ENSPFOG00000004746	si:dkey-16l2.16	100	86.603	ENSSFOG00015021448	-	100	86.603	Scleropages_formosus
ENSPFOG00000004746	si:dkey-16l2.16	100	85.167	ENSSMAG00000011769	si:dkey-16l2.16	94	85.167	Scophthalmus_maximus
ENSPFOG00000004746	si:dkey-16l2.16	100	90.431	ENSSDUG00000005719	si:dkey-16l2.16	100	90.431	Seriola_dumerili
ENSPFOG00000004746	si:dkey-16l2.16	100	90.431	ENSSLDG00000003631	si:dkey-16l2.16	100	90.431	Seriola_lalandi_dorsalis
ENSPFOG00000004746	si:dkey-16l2.16	100	89.474	ENSSPAG00000006302	si:dkey-16l2.16	100	89.474	Stegastes_partitus
ENSPFOG00000004746	si:dkey-16l2.16	100	88.517	ENSTRUG00000025076	si:dkey-16l2.16	94	96.639	Takifugu_rubripes
ENSPFOG00000004746	si:dkey-16l2.16	100	89.474	ENSTNIG00000011300	si:dkey-16l2.16	100	89.474	Tetraodon_nigroviridis
ENSPFOG00000004746	si:dkey-16l2.16	100	99.522	ENSXMAG00000021767	si:dkey-16l2.16	100	99.522	Xiphophorus_maculatus