EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000004824 (Gene tree)
Gene ID: 103150012
Gene Symbol: rtca
Alias: -
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 6264 bases
Position: chrKI519850.1:853303-859566
Accession: 103150012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000004853	RTC	PF01137.21	1.3e-84	1	1
ENSPFOP00000004853	RTC_insert	PF05189.13	1.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000004862	-	1484	XM_007569436	ENSPFOP00000004853	365 (aa)	XP_007569498	A0A087XGF0

Gene Model

Click here to download ENSPFOG00000004824's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000004824's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000004824	rtca	100	71.390	ENSG00000137996	RTCA	100	71.390	Homo_sapiens
ENSPFOG00000004824	rtca	100	91.233	ENSAPOG00000001345	rtca	99	91.233	Acanthochromis_polyacanthus
ENSPFOG00000004824	rtca	73	73.978	ENSAMEG00000008855	RTCA	100	73.978	Ailuropoda_melanoleuca
ENSPFOG00000004824	rtca	100	91.507	ENSACIG00000019643	rtca	100	91.507	Amphilophus_citrinellus
ENSPFOG00000004824	rtca	100	91.507	ENSAOCG00000014979	rtca	99	91.507	Amphiprion_ocellaris
ENSPFOG00000004824	rtca	100	91.507	ENSAPEG00000006945	rtca	99	91.507	Amphiprion_percula
ENSPFOG00000004824	rtca	96	92.571	ENSATEG00000006315	rtca	96	92.571	Anabas_testudineus
ENSPFOG00000004824	rtca	96	67.514	ENSAPLG00000015430	RTCA	100	67.514	Anas_platyrhynchos
ENSPFOG00000004824	rtca	100	71.390	ENSANAG00000025446	RTCA	100	71.390	Aotus_nancymaae
ENSPFOG00000004824	rtca	100	91.781	ENSACLG00000020770	rtca	99	91.781	Astatotilapia_calliptera
ENSPFOG00000004824	rtca	100	78.356	ENSAMXG00000043271	rtca	100	78.356	Astyanax_mexicanus
ENSPFOG00000004824	rtca	100	72.480	ENSBTAG00000006321	RTCA	100	72.480	Bos_taurus
ENSPFOG00000004824	rtca	100	71.662	ENSCJAG00000003398	RTCA	100	71.662	Callithrix_jacchus
ENSPFOG00000004824	rtca	100	71.390	ENSCAFG00000020010	RTCA	68	71.390	Canis_familiaris
ENSPFOG00000004824	rtca	100	71.390	ENSCAFG00020011528	RTCA	57	71.390	Canis_lupus_dingo
ENSPFOG00000004824	rtca	100	72.207	ENSCHIG00000018937	RTCA	100	72.207	Capra_hircus
ENSPFOG00000004824	rtca	100	71.935	ENSTSYG00000011305	RTCA	100	71.935	Carlito_syrichta
ENSPFOG00000004824	rtca	100	71.117	ENSCCAG00000021844	RTCA	100	71.117	Cebus_capucinus
ENSPFOG00000004824	rtca	100	70.185	ENSCATG00000019364	RTCA	100	72.816	Cercocebus_atys
ENSPFOG00000004824	rtca	86	73.734	ENSCLAG00000006125	RTCA	100	73.734	Chinchilla_lanigera
ENSPFOG00000004824	rtca	100	71.935	ENSCSAG00000001509	RTCA	100	71.935	Chlorocebus_sabaeus
ENSPFOG00000004824	rtca	100	70.845	ENSCHOG00000005211	RTCA	100	70.845	Choloepus_hoffmanni
ENSPFOG00000004824	rtca	100	68.306	ENSCPBG00000026658	RTCA	100	68.306	Chrysemys_picta_bellii
ENSPFOG00000004824	rtca	98	56.944	ENSCING00000007875	-	98	56.944	Ciona_intestinalis
ENSPFOG00000004824	rtca	98	56.389	ENSCSAVG00000007269	-	98	56.389	Ciona_savignyi
ENSPFOG00000004824	rtca	100	71.662	ENSCANG00000040106	RTCA	100	71.662	Colobus_angolensis_palliatus
ENSPFOG00000004824	rtca	73	72.119	ENSCGRG00001013163	Rtca	85	72.119	Cricetulus_griseus_chok1gshd
ENSPFOG00000004824	rtca	98	85.515	ENSCSEG00000000530	rtca	96	85.515	Cynoglossus_semilaevis
ENSPFOG00000004824	rtca	100	74.932	ENSCVAG00000021809	rtca	100	74.932	Cyprinodon_variegatus
ENSPFOG00000004824	rtca	100	78.356	ENSDARG00000002215	rtca	100	78.356	Danio_rerio
ENSPFOG00000004824	rtca	100	72.207	ENSDNOG00000000456	RTCA	100	72.207	Dasypus_novemcinctus
ENSPFOG00000004824	rtca	100	71.662	ENSDORG00000005448	Rtca	100	71.662	Dipodomys_ordii
ENSPFOG00000004824	rtca	98	39.385	FBgn0025630	Rtca	98	39.385	Drosophila_melanogaster
ENSPFOG00000004824	rtca	93	52.339	ENSEBUG00000008556	rtca	94	52.339	Eptatretus_burgeri
ENSPFOG00000004824	rtca	100	71.935	ENSEASG00005015926	RTCA	100	71.935	Equus_asinus_asinus
ENSPFOG00000004824	rtca	100	71.935	ENSECAG00000019831	RTCA	100	71.935	Equus_caballus
ENSPFOG00000004824	rtca	91	64.740	ENSEEUG00000001165	RTCA	100	64.740	Erinaceus_europaeus
ENSPFOG00000004824	rtca	99	77.135	ENSELUG00000003741	rtca	99	77.135	Esox_lucius
ENSPFOG00000004824	rtca	100	71.935	ENSFCAG00000024460	RTCA	100	71.935	Felis_catus
ENSPFOG00000004824	rtca	93	68.142	ENSFALG00000002443	RTCA	91	68.142	Ficedula_albicollis
ENSPFOG00000004824	rtca	98	58.127	ENSFDAG00000016084	-	100	58.127	Fukomys_damarensis
ENSPFOG00000004824	rtca	100	71.117	ENSFDAG00000012070	-	100	71.117	Fukomys_damarensis
ENSPFOG00000004824	rtca	70	75.875	ENSFHEG00000002868	rtca	92	84.186	Fundulus_heteroclitus
ENSPFOG00000004824	rtca	100	79.452	ENSGMOG00000013264	rtca	100	79.452	Gadus_morhua
ENSPFOG00000004824	rtca	100	68.306	ENSGALG00000005277	RTCA	100	68.306	Gallus_gallus
ENSPFOG00000004824	rtca	100	97.808	ENSGAFG00000011853	rtca	99	97.808	Gambusia_affinis
ENSPFOG00000004824	rtca	100	86.575	ENSGACG00000013497	rtca	100	86.575	Gasterosteus_aculeatus
ENSPFOG00000004824	rtca	80	67.687	ENSGAGG00000023306	RTCA	100	67.687	Gopherus_agassizii
ENSPFOG00000004824	rtca	100	70.845	ENSGGOG00000044018	-	100	70.845	Gorilla_gorilla
ENSPFOG00000004824	rtca	100	71.390	ENSGGOG00000009546	-	100	71.845	Gorilla_gorilla
ENSPFOG00000004824	rtca	100	91.507	ENSHBUG00000002114	rtca	99	91.507	Haplochromis_burtoni
ENSPFOG00000004824	rtca	100	71.662	ENSHGLG00000002617	RTCA	100	71.662	Heterocephalus_glaber_female
ENSPFOG00000004824	rtca	100	71.662	ENSHGLG00100006056	RTCA	100	71.662	Heterocephalus_glaber_male
ENSPFOG00000004824	rtca	100	76.164	ENSHCOG00000020628	rtca	89	76.164	Hippocampus_comes
ENSPFOG00000004824	rtca	100	77.534	ENSIPUG00000024803	rtca	100	77.534	Ictalurus_punctatus
ENSPFOG00000004824	rtca	100	66.757	ENSSTOG00000013528	-	94	72.981	Ictidomys_tridecemlineatus
ENSPFOG00000004824	rtca	100	63.661	ENSSTOG00000033099	-	100	63.661	Ictidomys_tridecemlineatus
ENSPFOG00000004824	rtca	100	52.186	ENSJJAG00000016178	Rtca	100	52.186	Jaculus_jaculus
ENSPFOG00000004824	rtca	100	90.959	ENSKMAG00000006651	rtca	99	90.959	Kryptolebias_marmoratus
ENSPFOG00000004824	rtca	99	87.293	ENSLBEG00000028971	rtca	99	87.293	Labrus_bergylta
ENSPFOG00000004824	rtca	87	86.709	ENSLBEG00000002448	-	98	86.709	Labrus_bergylta
ENSPFOG00000004824	rtca	100	67.486	ENSLACG00000013666	RTCA	100	67.486	Latimeria_chalumnae
ENSPFOG00000004824	rtca	100	74.044	ENSLOCG00000000093	rtca	99	74.044	Lepisosteus_oculatus
ENSPFOG00000004824	rtca	100	71.117	ENSLAFG00000001473	RTCA	100	71.117	Loxodonta_africana
ENSPFOG00000004824	rtca	100	71.935	ENSMFAG00000034132	RTCA	100	71.935	Macaca_fascicularis
ENSPFOG00000004824	rtca	100	71.935	ENSMMUG00000019105	RTCA	100	71.935	Macaca_mulatta
ENSPFOG00000004824	rtca	84	72.492	ENSMNEG00000037163	RTCA	100	72.492	Macaca_nemestrina
ENSPFOG00000004824	rtca	100	59.401	ENSMLEG00000042151	RTCA	100	59.401	Mandrillus_leucophaeus
ENSPFOG00000004824	rtca	100	92.329	ENSMAMG00000016536	rtca	100	92.329	Mastacembelus_armatus
ENSPFOG00000004824	rtca	100	91.781	ENSMZEG00005017945	rtca	99	91.781	Maylandia_zebra
ENSPFOG00000004824	rtca	87	68.454	ENSMGAG00000006892	RTCA	99	68.454	Meleagris_gallopavo
ENSPFOG00000004824	rtca	100	71.390	ENSMAUG00000008488	Rtca	100	71.390	Mesocricetus_auratus
ENSPFOG00000004824	rtca	84	73.463	ENSMICG00000008643	RTCA	100	73.463	Microcebus_murinus
ENSPFOG00000004824	rtca	100	70.300	ENSMOCG00000016660	Rtca	100	70.300	Microtus_ochrogaster
ENSPFOG00000004824	rtca	84	89.902	ENSMMOG00000007750	rtca	100	89.902	Mola_mola
ENSPFOG00000004824	rtca	100	71.935	ENSMODG00000003557	RTCA	100	71.935	Monodelphis_domestica
ENSPFOG00000004824	rtca	100	91.781	ENSMALG00000020844	rtca	100	91.781	Monopterus_albus
ENSPFOG00000004824	rtca	100	70.027	MGP_CAROLIEiJ_G0025565	Rtca	100	70.027	Mus_caroli
ENSPFOG00000004824	rtca	100	69.755	ENSMUSG00000000339	Rtca	100	69.755	Mus_musculus
ENSPFOG00000004824	rtca	100	70.027	MGP_PahariEiJ_G0027011	Rtca	100	70.027	Mus_pahari
ENSPFOG00000004824	rtca	100	70.027	MGP_SPRETEiJ_G0026515	Rtca	100	70.027	Mus_spretus
ENSPFOG00000004824	rtca	100	71.935	ENSMPUG00000012119	RTCA	100	71.935	Mustela_putorius_furo
ENSPFOG00000004824	rtca	100	67.935	ENSMLUG00000009922	RTCA	100	67.935	Myotis_lucifugus
ENSPFOG00000004824	rtca	100	70.845	ENSNGAG00000011540	Rtca	99	70.845	Nannospalax_galili
ENSPFOG00000004824	rtca	100	92.055	ENSNBRG00000003062	rtca	99	92.055	Neolamprologus_brichardi
ENSPFOG00000004824	rtca	100	71.662	ENSNLEG00000031426	RTCA	100	71.662	Nomascus_leucogenys
ENSPFOG00000004824	rtca	73	69.888	ENSOPRG00000012092	RTCA	71	69.888	Ochotona_princeps
ENSPFOG00000004824	rtca	95	72.206	ENSODEG00000006990	RTCA	96	72.443	Octodon_degus
ENSPFOG00000004824	rtca	100	92.329	ENSONIG00000007753	rtca	99	92.329	Oreochromis_niloticus
ENSPFOG00000004824	rtca	86	72.871	ENSOANG00000012055	RTCA	98	72.871	Ornithorhynchus_anatinus
ENSPFOG00000004824	rtca	100	71.935	ENSOCUG00000014247	RTCA	100	71.935	Oryctolagus_cuniculus
ENSPFOG00000004824	rtca	100	90.137	ENSORLG00000013605	rtca	100	90.137	Oryzias_latipes
ENSPFOG00000004824	rtca	100	90.411	ENSORLG00020001904	rtca	100	90.411	Oryzias_latipes_hni
ENSPFOG00000004824	rtca	100	90.137	ENSORLG00015021064	rtca	100	90.137	Oryzias_latipes_hsok
ENSPFOG00000004824	rtca	100	90.685	ENSOMEG00000000756	rtca	100	90.685	Oryzias_melastigma
ENSPFOG00000004824	rtca	100	66.848	ENSOGAG00000005627	RTCA	100	66.848	Otolemur_garnettii
ENSPFOG00000004824	rtca	87	72.956	ENSOARG00000018122	RTCA	100	72.956	Ovis_aries
ENSPFOG00000004824	rtca	100	69.129	ENSPPAG00000035119	RTCA	100	71.521	Pan_paniscus
ENSPFOG00000004824	rtca	100	71.935	ENSPPRG00000000350	RTCA	100	71.935	Panthera_pardus
ENSPFOG00000004824	rtca	100	71.662	ENSPTIG00000012816	RTCA	100	71.662	Panthera_tigris_altaica
ENSPFOG00000004824	rtca	100	69.129	ENSPTRG00000001004	RTCA	100	71.521	Pan_troglodytes
ENSPFOG00000004824	rtca	100	71.935	ENSPANG00000000346	RTCA	100	71.935	Papio_anubis
ENSPFOG00000004824	rtca	100	79.726	ENSPKIG00000001653	rtca	100	79.726	Paramormyrops_kingsleyae
ENSPFOG00000004824	rtca	100	68.033	ENSPSIG00000011408	RTCA	100	68.033	Pelodiscus_sinensis
ENSPFOG00000004824	rtca	100	70.572	ENSPEMG00000018582	Rtca	100	70.572	Peromyscus_maniculatus_bairdii
ENSPFOG00000004824	rtca	99	55.249	ENSPMAG00000009110	rtca	98	55.249	Petromyzon_marinus
ENSPFOG00000004824	rtca	100	71.662	ENSPCIG00000007684	RTCA	100	71.662	Phascolarctos_cinereus
ENSPFOG00000004824	rtca	100	99.452	ENSPLAG00000011753	rtca	99	99.452	Poecilia_latipinna
ENSPFOG00000004824	rtca	100	99.452	ENSPMEG00000020469	rtca	99	99.452	Poecilia_mexicana
ENSPFOG00000004824	rtca	100	98.356	ENSPREG00000001365	rtca	99	98.356	Poecilia_reticulata
ENSPFOG00000004824	rtca	100	71.935	ENSPPYG00000001115	RTCA	100	71.935	Pongo_abelii
ENSPFOG00000004824	rtca	100	68.937	ENSPCAG00000005076	RTCA	100	68.937	Procavia_capensis
ENSPFOG00000004824	rtca	100	72.480	ENSPCOG00000005603	RTCA	100	72.480	Propithecus_coquereli
ENSPFOG00000004824	rtca	100	68.074	ENSPVAG00000009478	RTCA	100	68.074	Pteropus_vampyrus
ENSPFOG00000004824	rtca	100	91.781	ENSPNYG00000004722	rtca	99	91.781	Pundamilia_nyererei
ENSPFOG00000004824	rtca	100	78.082	ENSPNAG00000022270	rtca	100	78.082	Pygocentrus_nattereri
ENSPFOG00000004824	rtca	100	70.027	ENSRNOG00000014575	Rtca	100	70.027	Rattus_norvegicus
ENSPFOG00000004824	rtca	100	69.393	ENSRBIG00000041180	RTCA	100	71.845	Rhinopithecus_bieti
ENSPFOG00000004824	rtca	100	71.390	ENSRROG00000024929	RTCA	100	71.390	Rhinopithecus_roxellana
ENSPFOG00000004824	rtca	100	70.845	ENSSBOG00000028626	RTCA	100	70.845	Saimiri_boliviensis_boliviensis
ENSPFOG00000004824	rtca	100	71.662	ENSSHAG00000001758	RTCA	100	71.662	Sarcophilus_harrisii
ENSPFOG00000004824	rtca	99	86.188	ENSSMAG00000014680	rtca	98	86.188	Scophthalmus_maximus
ENSPFOG00000004824	rtca	98	91.643	ENSSDUG00000015585	rtca	98	91.185	Seriola_dumerili
ENSPFOG00000004824	rtca	96	91.714	ENSSLDG00000018985	rtca	95	91.714	Seriola_lalandi_dorsalis
ENSPFOG00000004824	rtca	86	67.823	ENSSARG00000013993	RTCA	100	67.823	Sorex_araneus
ENSPFOG00000004824	rtca	100	91.781	ENSSPAG00000011938	rtca	99	91.781	Stegastes_partitus
ENSPFOG00000004824	rtca	100	72.207	ENSSSCG00000006865	RTCA	100	72.207	Sus_scrofa
ENSPFOG00000004824	rtca	100	69.126	ENSTGUG00000005154	RTCA	100	69.126	Taeniopygia_guttata
ENSPFOG00000004824	rtca	100	89.315	ENSTRUG00000008799	rtca	100	89.315	Takifugu_rubripes
ENSPFOG00000004824	rtca	100	87.397	ENSTNIG00000004725	rtca	100	87.397	Tetraodon_nigroviridis
ENSPFOG00000004824	rtca	58	58.095	ENSTBEG00000000943	RTCA	80	53.782	Tupaia_belangeri
ENSPFOG00000004824	rtca	100	70.185	ENSTTRG00000015327	RTCA	100	70.185	Tursiops_truncatus
ENSPFOG00000004824	rtca	95	70.115	ENSUAMG00000017265	RTCA	97	70.115	Ursus_americanus
ENSPFOG00000004824	rtca	100	71.390	ENSUMAG00000007881	RTCA	100	71.390	Ursus_maritimus
ENSPFOG00000004824	rtca	87	64.375	ENSVPAG00000001039	RTCA	84	64.375	Vicugna_pacos
ENSPFOG00000004824	rtca	100	71.390	ENSVVUG00000022041	RTCA	68	71.390	Vulpes_vulpes
ENSPFOG00000004824	rtca	99	57.065	ENSXETG00000031661	RTCA	99	57.065	Xenopus_tropicalis
ENSPFOG00000004824	rtca	100	86.301	ENSXCOG00000008002	rtca	100	86.301	Xiphophorus_couchianus
ENSPFOG00000004824	rtca	100	97.808	ENSXMAG00000005482	rtca	99	97.808	Xiphophorus_maculatus