EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000004838 (Gene tree)
Gene ID: 103142376
Gene Symbol: rab42a
Alias: -
Full Name: ras-related protein Rab-39B-like
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 10116 bases
Position: chrKI519706.1:984647-994762
Accession: 103142376
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000004716	MMR_HSR1	PF01926.23	7.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000004725	-	5990	-	ENSPFOP00000004716	265 (aa)	XP_007558472	A0A087XG13

Gene Model

Click here to download ENSPFOG00000004838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000004838's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000004838	rab42a	62	39.881	ENSPFOG00000022477	-	76	39.881
ENSPFOG00000004838	rab42a	64	34.706	ENSPFOG00000008890	rras	75	34.706
ENSPFOG00000004838	rab42a	71	39.153	ENSPFOG00000012594	rab1ba	87	39.153
ENSPFOG00000004838	rab42a	63	31.737	ENSPFOG00000001515	rhebl1	88	31.737
ENSPFOG00000004838	rab42a	59	38.365	ENSPFOG00000015409	si:dkey-13a21.4	77	38.365
ENSPFOG00000004838	rab42a	59	39.490	ENSPFOG00000019509	rab6a	75	39.490
ENSPFOG00000004838	rab42a	72	31.795	ENSPFOG00000008547	rab34a	63	31.795
ENSPFOG00000004838	rab42a	72	60.104	ENSPFOG00000014499	si:dkey-34d22.5	86	60.000
ENSPFOG00000004838	rab42a	70	41.935	ENSPFOG00000006159	rab11ba	84	41.935
ENSPFOG00000004838	rab42a	81	37.383	ENSPFOG00000001167	-	97	37.383
ENSPFOG00000004838	rab42a	57	34.437	ENSPFOG00000002595	hrasb	85	33.537
ENSPFOG00000004838	rab42a	55	44.595	ENSPFOG00000000349	rab33ba	61	44.595
ENSPFOG00000004838	rab42a	66	38.889	ENSPFOG00000004037	rab33a	65	38.798
ENSPFOG00000004838	rab42a	59	38.217	ENSPFOG00000011424	RAB41	73	38.217
ENSPFOG00000004838	rab42a	60	44.025	ENSPFOG00000010632	rab25a	73	44.025
ENSPFOG00000004838	rab42a	65	42.442	ENSPFOG00000006655	rab35b	84	42.442
ENSPFOG00000004838	rab42a	82	39.450	ENSPFOG00000001829	rab1ab	100	39.450
ENSPFOG00000004838	rab42a	76	31.220	ENSPFOG00000011444	rab34b	80	31.220
ENSPFOG00000004838	rab42a	59	35.669	ENSPFOG00000013027	rab22a	95	35.669
ENSPFOG00000004838	rab42a	79	37.143	ENSPFOG00000017775	rab15	96	37.143
ENSPFOG00000004838	rab42a	70	41.398	ENSPFOG00000024114	-	84	41.398
ENSPFOG00000004838	rab42a	62	36.585	ENSPFOG00000011263	rab5aa	75	36.585
ENSPFOG00000004838	rab42a	57	33.775	ENSPFOG00000015499	kras	85	32.927
ENSPFOG00000004838	rab42a	61	34.337	ENSPFOG00000003934	-	79	34.337
ENSPFOG00000004838	rab42a	59	38.509	ENSPFOG00000024704	rab9a	79	38.509
ENSPFOG00000004838	rab42a	62	34.756	ENSPFOG00000012977	rab22a	84	34.756
ENSPFOG00000004838	rab42a	68	41.667	ENSPFOG00000005479	rab30	88	41.667
ENSPFOG00000004838	rab42a	59	38.217	ENSPFOG00000003742	rab6ba	75	38.217
ENSPFOG00000004838	rab42a	62	42.424	ENSPFOG00000013491	rab18b	80	42.424
ENSPFOG00000004838	rab42a	51	37.500	ENSPFOG00000024387	rras2	77	37.500
ENSPFOG00000004838	rab42a	55	43.243	ENSPFOG00000009101	-	63	43.243
ENSPFOG00000004838	rab42a	65	45.349	ENSPFOG00000004746	si:dkey-16l2.16	81	45.349
ENSPFOG00000004838	rab42a	64	35.838	ENSPFOG00000013066	RAB29	83	35.838
ENSPFOG00000004838	rab42a	61	34.337	ENSPFOG00000003465	RAB7A	79	34.337
ENSPFOG00000004838	rab42a	62	30.539	ENSPFOG00000008678	si:cabz01085950.1	82	30.539
ENSPFOG00000004838	rab42a	67	43.258	ENSPFOG00000000498	-	85	43.258
ENSPFOG00000004838	rab42a	69	41.530	ENSPFOG00000011316	rab11al	84	41.530
ENSPFOG00000004838	rab42a	68	41.111	ENSPFOG00000011310	rab25b	85	41.111
ENSPFOG00000004838	rab42a	65	43.023	ENSPFOG00000014418	-	85	43.023
ENSPFOG00000004838	rab42a	62	40.606	ENSPFOG00000013182	RAB15	78	40.606
ENSPFOG00000004838	rab42a	69	32.967	ENSPFOG00000004921	rheb	93	32.967
ENSPFOG00000004838	rab42a	82	54.128	ENSPFOG00000004684	-	100	54.128
ENSPFOG00000004838	rab42a	72	37.824	ENSPFOG00000019144	-	71	37.824
ENSPFOG00000004838	rab42a	62	31.928	ENSPFOG00000017960	rabl2	73	31.928
ENSPFOG00000004838	rab42a	70	40.860	ENSPFOG00000009284	rab11a	86	40.860
ENSPFOG00000004838	rab42a	72	35.938	ENSPFOG00000014630	rab4a	91	35.897
ENSPFOG00000004838	rab42a	81	38.140	ENSPFOG00000019821	RAB14	97	38.140
ENSPFOG00000004838	rab42a	82	55.046	ENSPFOG00000004492	RAB39B	100	55.046
ENSPFOG00000004838	rab42a	71	46.277	ENSPFOG00000004786	rab2a	88	46.277
ENSPFOG00000004838	rab42a	62	38.415	ENSPFOG00000012082	rab5c	74	38.415
ENSPFOG00000004838	rab42a	61	38.788	ENSPFOG00000020060	rab9b	81	38.788
ENSPFOG00000004838	rab42a	59	34.615	ENSPFOG00000011493	rab23	70	33.929
ENSPFOG00000004838	rab42a	57	37.500	ENSPFOG00000000601	si:ch73-116o1.2	78	37.195
ENSPFOG00000004838	rab42a	72	37.824	ENSPFOG00000006314	-	71	37.824
ENSPFOG00000004838	rab42a	63	44.910	ENSPFOG00000013810	zgc:171927	76	44.910
ENSPFOG00000004838	rab42a	65	40.698	ENSPFOG00000001579	rab12	70	40.698
ENSPFOG00000004838	rab42a	70	41.398	ENSPFOG00000006224	-	84	41.398
ENSPFOG00000004838	rab42a	62	37.195	ENSPFOG00000005901	-	73	37.195
ENSPFOG00000004838	rab42a	62	38.415	ENSPFOG00000023458	rab5c	74	38.415
ENSPFOG00000004838	rab42a	62	42.614	ENSPFOG00000022360	-	73	42.614
ENSPFOG00000004838	rab42a	62	41.212	ENSPFOG00000007571	rab18a	80	41.212

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000004838	rab42a	82	94.495	ENSAPOG00000009188	rab42a	100	94.495	Acanthochromis_polyacanthus
ENSPFOG00000004838	rab42a	82	94.037	ENSACIG00000003102	rab42a	100	94.037	Amphilophus_citrinellus
ENSPFOG00000004838	rab42a	84	95.495	ENSAOCG00000012921	rab42a	97	86.770	Amphiprion_ocellaris
ENSPFOG00000004838	rab42a	84	95.495	ENSAPEG00000007713	rab42a	97	86.770	Amphiprion_percula
ENSPFOG00000004838	rab42a	82	92.661	ENSATEG00000009052	rab42a	100	92.661	Anabas_testudineus
ENSPFOG00000004838	rab42a	82	93.578	ENSACLG00000007514	rab42a	100	93.578	Astatotilapia_calliptera
ENSPFOG00000004838	rab42a	82	88.532	ENSAMXG00000032729	rab42a	100	88.532	Astyanax_mexicanus
ENSPFOG00000004838	rab42a	82	91.743	ENSCSEG00000010582	rab42a	100	91.743	Cynoglossus_semilaevis
ENSPFOG00000004838	rab42a	74	49.239	ENSDARG00000102580	CU571310.1	93	49.239	Danio_rerio
ENSPFOG00000004838	rab42a	82	89.908	ENSDARG00000034215	rab42a	100	89.908	Danio_rerio
ENSPFOG00000004838	rab42a	82	88.991	ENSELUG00000010345	rab42a	100	88.991	Esox_lucius
ENSPFOG00000004838	rab42a	82	97.706	ENSFHEG00000013106	rab42a	100	97.706	Fundulus_heteroclitus
ENSPFOG00000004838	rab42a	82	99.083	ENSGAFG00000002141	rab42a	100	99.083	Gambusia_affinis
ENSPFOG00000004838	rab42a	96	85.156	ENSHBUG00000015126	rab42a	95	85.156	Haplochromis_burtoni
ENSPFOG00000004838	rab42a	82	85.321	ENSIPUG00000011376	rab42a	100	85.321	Ictalurus_punctatus
ENSPFOG00000004838	rab42a	82	95.872	ENSKMAG00000007267	rab42a	100	95.872	Kryptolebias_marmoratus
ENSPFOG00000004838	rab42a	82	94.495	ENSLBEG00000001193	rab42a	100	94.954	Labrus_bergylta
ENSPFOG00000004838	rab42a	82	64.679	ENSLACG00000012755	-	100	64.679	Latimeria_chalumnae
ENSPFOG00000004838	rab42a	82	80.734	ENSLOCG00000003453	rab42a	100	80.734	Lepisosteus_oculatus
ENSPFOG00000004838	rab42a	82	49.772	ENSLOCG00000015825	-	99	49.772	Lepisosteus_oculatus
ENSPFOG00000004838	rab42a	82	94.954	ENSMAMG00000002296	rab42a	100	94.954	Mastacembelus_armatus
ENSPFOG00000004838	rab42a	96	85.156	ENSMZEG00005012460	rab42a	95	85.156	Maylandia_zebra
ENSPFOG00000004838	rab42a	82	90.826	ENSMMOG00000014358	rab42a	100	90.826	Mola_mola
ENSPFOG00000004838	rab42a	96	84.766	ENSNBRG00000021487	rab42a	95	84.766	Neolamprologus_brichardi
ENSPFOG00000004838	rab42a	82	94.495	ENSORLG00000022335	rab42a	100	94.495	Oryzias_latipes
ENSPFOG00000004838	rab42a	82	94.495	ENSORLG00020013895	rab42a	100	94.495	Oryzias_latipes_hni
ENSPFOG00000004838	rab42a	82	94.495	ENSORLG00015004273	rab42a	100	94.495	Oryzias_latipes_hsok
ENSPFOG00000004838	rab42a	82	94.495	ENSOMEG00000020418	rab42a	100	94.495	Oryzias_melastigma
ENSPFOG00000004838	rab42a	73	47.938	ENSPKIG00000015234	-	93	47.938	Paramormyrops_kingsleyae
ENSPFOG00000004838	rab42a	82	76.256	ENSPKIG00000021215	-	100	76.256	Paramormyrops_kingsleyae
ENSPFOG00000004838	rab42a	74	95.939	ENSPMGG00000024112	rab42a	90	95.939	Periophthalmus_magnuspinnatus
ENSPFOG00000004838	rab42a	82	99.541	ENSPLAG00000005628	rab42a	100	99.541	Poecilia_latipinna
ENSPFOG00000004838	rab42a	82	100.000	ENSPMEG00000019497	rab42a	100	100.000	Poecilia_mexicana
ENSPFOG00000004838	rab42a	82	99.083	ENSPREG00000013962	rab42a	100	99.083	Poecilia_reticulata
ENSPFOG00000004838	rab42a	96	85.156	ENSPNYG00000010325	rab42a	95	85.156	Pundamilia_nyererei
ENSPFOG00000004838	rab42a	82	88.073	ENSPNAG00000016567	rab42a	100	88.073	Pygocentrus_nattereri
ENSPFOG00000004838	rab42a	82	83.486	ENSSFOG00015020732	rab42a	100	83.486	Scleropages_formosus
ENSPFOG00000004838	rab42a	82	45.662	ENSSFOG00015016000	-	97	45.662	Scleropages_formosus
ENSPFOG00000004838	rab42a	82	93.119	ENSSMAG00000020311	rab42a	100	93.119	Scophthalmus_maximus
ENSPFOG00000004838	rab42a	82	95.413	ENSSDUG00000011851	rab42a	100	95.413	Seriola_dumerili
ENSPFOG00000004838	rab42a	82	95.413	ENSSLDG00000020354	rab42a	100	95.413	Seriola_lalandi_dorsalis
ENSPFOG00000004838	rab42a	82	94.954	ENSSPAG00000016167	rab42a	100	94.954	Stegastes_partitus
ENSPFOG00000004838	rab42a	82	94.037	ENSTRUG00000010224	rab42a	100	94.037	Takifugu_rubripes
ENSPFOG00000004838	rab42a	82	98.624	ENSXCOG00000003428	rab42a	100	98.624	Xiphophorus_couchianus
ENSPFOG00000004838	rab42a	82	98.624	ENSXMAG00000028376	rab42a	100	98.624	Xiphophorus_maculatus