EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000005059 (Gene tree)
Gene ID: 103147843
Gene Symbol: blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 9530 bases
Position: chrKI519801.1:277527-287056
Accession: 103147843
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000005199	HRDC	PF00570.23	2.1e-13	1	1
ENSPFOP00000022202	HRDC	PF00570.23	2.2e-13	1	1
ENSPFOP00000005199	BDHCT	PF08072.11	1.2e-19	1	1
ENSPFOP00000022202	BDHCT	PF08072.11	7.5e-18	1	1
ENSPFOP00000022202	DEAD	PF00270.29	9.8e-18	1	1
ENSPFOP00000005199	DEAD	PF00270.29	1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000005208	-	4433	XM_007566386	ENSPFOP00000005199	1366 (aa)	XP_007566448	A0A087XHE6
ENSPFOT00000022482	-	4547	-	ENSPFOP00000022202	1407 (aa)	-	A0A096LSR1

Gene Model

Click here to download ENSPFOG00000005059's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000005059's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000005059	blm	59	65.301	ENSG00000197299	BLM	54	73.770	Homo_sapiens
ENSPFOG00000005059	blm	100	69.528	ENSAPOG00000017966	blm	100	70.158	Acanthochromis_polyacanthus
ENSPFOG00000005059	blm	64	65.128	ENSAMEG00000013843	BLM	63	64.615	Ailuropoda_melanoleuca
ENSPFOG00000005059	blm	100	70.651	ENSACIG00000023762	blm	100	70.389	Amphilophus_citrinellus
ENSPFOG00000005059	blm	100	69.807	ENSAOCG00000003318	blm	100	70.580	Amphiprion_ocellaris
ENSPFOG00000005059	blm	100	69.587	ENSAPEG00000018105	blm	100	69.236	Amphiprion_percula
ENSPFOG00000005059	blm	99	69.478	ENSATEG00000006421	blm	100	69.049	Anabas_testudineus
ENSPFOG00000005059	blm	80	51.583	ENSAPLG00000006878	BLM	82	60.161	Anas_platyrhynchos
ENSPFOG00000005059	blm	60	65.806	ENSACAG00000014275	BLM	84	65.508	Anolis_carolinensis
ENSPFOG00000005059	blm	59	63.248	ENSANAG00000038415	BLM	51	73.077	Aotus_nancymaae
ENSPFOG00000005059	blm	100	69.712	ENSACLG00000020354	blm	100	69.712	Astatotilapia_calliptera
ENSPFOG00000005059	blm	89	71.948	ENSAMXG00000016970	blm	87	72.052	Astyanax_mexicanus
ENSPFOG00000005059	blm	58	36.457	WBGene00001865	him-6	77	37.927	Caenorhabditis_elegans
ENSPFOG00000005059	blm	75	53.585	ENSCJAG00000009803	BLM	54	73.975	Callithrix_jacchus
ENSPFOG00000005059	blm	60	64.834	ENSCAFG00000012385	BLM	60	65.228	Canis_familiaris
ENSPFOG00000005059	blm	60	64.834	ENSCAFG00020016111	BLM	95	67.164	Canis_lupus_dingo
ENSPFOG00000005059	blm	56	65.217	ENSCHIG00000010329	BLM	52	75.897	Capra_hircus
ENSPFOG00000005059	blm	59	64.789	ENSTSYG00000012368	BLM	54	72.746	Carlito_syrichta
ENSPFOG00000005059	blm	62	71.014	ENSCAPG00000017976	BLM	75	71.014	Cavia_aperea
ENSPFOG00000005059	blm	83	49.551	ENSCPOG00000001761	BLM	59	61.198	Cavia_porcellus
ENSPFOG00000005059	blm	60	65.140	ENSCCAG00000023069	BLM	57	73.279	Cebus_capucinus
ENSPFOG00000005059	blm	83	51.399	ENSCATG00000040609	BLM	75	75.738	Cercocebus_atys
ENSPFOG00000005059	blm	99	46.847	ENSCLAG00000012111	BLM	59	62.156	Chinchilla_lanigera
ENSPFOG00000005059	blm	78	51.486	ENSCSAG00000017040	BLM	61	65.429	Chlorocebus_sabaeus
ENSPFOG00000005059	blm	50	60.185	ENSCHOG00000006255	BLM	50	60.185	Choloepus_hoffmanni
ENSPFOG00000005059	blm	82	50.998	ENSCPBG00000025000	BLM	77	64.118	Chrysemys_picta_bellii
ENSPFOG00000005059	blm	99	47.230	ENSCGRG00001024897	Blm	59	62.892	Cricetulus_griseus_chok1gshd
ENSPFOG00000005059	blm	95	65.266	ENSCSEG00000013483	blm	99	65.714	Cynoglossus_semilaevis
ENSPFOG00000005059	blm	76	78.448	ENSCVAG00000017583	blm	97	75.127	Cyprinodon_variegatus
ENSPFOG00000005059	blm	99	56.966	ENSDARG00000077089	blm	88	71.875	Danio_rerio
ENSPFOG00000005059	blm	59	64.450	ENSDNOG00000010159	BLM	57	64.450	Dasypus_novemcinctus
ENSPFOG00000005059	blm	59	62.349	ENSDORG00000011033	Blm	79	62.470	Dipodomys_ordii
ENSPFOG00000005059	blm	55	41.087	FBgn0002906	Blm	55	40.072	Drosophila_melanogaster
ENSPFOG00000005059	blm	55	55.556	ENSETEG00000015019	BLM	50	56.818	Echinops_telfairi
ENSPFOG00000005059	blm	83	49.867	ENSEASG00005006727	BLM	63	61.032	Equus_asinus_asinus
ENSPFOG00000005059	blm	63	62.335	ENSECAG00000011405	BLM	63	62.094	Equus_caballus
ENSPFOG00000005059	blm	60	63.939	ENSEEUG00000001434	BLM	59	63.555	Erinaceus_europaeus
ENSPFOG00000005059	blm	99	55.780	ENSELUG00000019098	blm	99	53.795	Esox_lucius
ENSPFOG00000005059	blm	64	64.962	ENSFCAG00000006087	BLM	63	73.006	Felis_catus
ENSPFOG00000005059	blm	79	52.205	ENSFALG00000010981	BLM	68	61.234	Ficedula_albicollis
ENSPFOG00000005059	blm	53	67.593	ENSFDAG00000012658	BLM	55	67.593	Fukomys_damarensis
ENSPFOG00000005059	blm	100	79.598	ENSFHEG00000002553	blm	100	79.035	Fundulus_heteroclitus
ENSPFOG00000005059	blm	99	59.617	ENSGMOG00000016431	blm	98	70.302	Gadus_morhua
ENSPFOG00000005059	blm	82	51.419	ENSGALG00000008256	BLM	83	64.070	Gallus_gallus
ENSPFOG00000005059	blm	100	94.234	ENSGAFG00000001117	blm	100	94.234	Gambusia_affinis
ENSPFOG00000005059	blm	99	64.579	ENSGACG00000010863	blm	100	88.068	Gasterosteus_aculeatus
ENSPFOG00000005059	blm	51	70.962	ENSGAGG00000005383	BLM	80	68.266	Gopherus_agassizii
ENSPFOG00000005059	blm	74	53.302	ENSGGOG00000007710	BLM	75	75.738	Gorilla_gorilla
ENSPFOG00000005059	blm	100	71.213	ENSHBUG00000015943	blm	100	71.285	Haplochromis_burtoni
ENSPFOG00000005059	blm	88	63.717	ENSHGLG00000013231	BLM	83	63.717	Heterocephalus_glaber_female
ENSPFOG00000005059	blm	74	68.451	ENSHCOG00000011455	blm	100	67.433	Hippocampus_comes
ENSPFOG00000005059	blm	75	63.521	ENSIPUG00000000529	blm	86	61.605	Ictalurus_punctatus
ENSPFOG00000005059	blm	75	54.229	ENSSTOG00000005000	BLM	61	60.162	Ictidomys_tridecemlineatus
ENSPFOG00000005059	blm	73	46.483	ENSJJAG00000016322	Blm	80	50.885	Jaculus_jaculus
ENSPFOG00000005059	blm	100	76.352	ENSKMAG00000016608	blm	100	74.694	Kryptolebias_marmoratus
ENSPFOG00000005059	blm	60	78.365	ENSLBEG00000018729	blm	96	78.277	Labrus_bergylta
ENSPFOG00000005059	blm	57	68.987	ENSLACG00000006490	BLM	60	64.032	Latimeria_chalumnae
ENSPFOG00000005059	blm	99	51.527	ENSLOCG00000014302	blm	85	69.065	Lepisosteus_oculatus
ENSPFOG00000005059	blm	75	53.205	ENSMFAG00000042982	BLM	75	76.066	Macaca_fascicularis
ENSPFOG00000005059	blm	74	53.581	ENSMMUG00000019526	BLM	75	76.066	Macaca_mulatta
ENSPFOG00000005059	blm	74	53.395	ENSMNEG00000031251	BLM	75	75.738	Macaca_nemestrina
ENSPFOG00000005059	blm	83	48.994	ENSMLEG00000032934	BLM	59	61.795	Mandrillus_leucophaeus
ENSPFOG00000005059	blm	99	70.036	ENSMAMG00000008726	blm	99	70.253	Mastacembelus_armatus
ENSPFOG00000005059	blm	100	68.750	ENSMZEG00005022323	blm	100	68.318	Maylandia_zebra
ENSPFOG00000005059	blm	85	65.256	ENSMAUG00000008953	Blm	55	65.641	Mesocricetus_auratus
ENSPFOG00000005059	blm	56	65.429	ENSMICG00000034442	BLM	50	73.566	Microcebus_murinus
ENSPFOG00000005059	blm	56	66.581	ENSMOCG00000016367	Blm	55	66.496	Microtus_ochrogaster
ENSPFOG00000005059	blm	100	67.740	ENSMMOG00000006959	blm	100	67.096	Mola_mola
ENSPFOG00000005059	blm	99	45.087	ENSMODG00000019449	BLM	59	61.503	Monodelphis_domestica
ENSPFOG00000005059	blm	100	70.798	ENSMALG00000007323	blm	100	70.014	Monopterus_albus
ENSPFOG00000005059	blm	99	46.804	MGP_CAROLIEiJ_G0029907	Blm	58	62.424	Mus_caroli
ENSPFOG00000005059	blm	99	47.478	ENSMUSG00000030528	Blm	60	60.864	Mus_musculus
ENSPFOG00000005059	blm	99	47.274	MGP_PahariEiJ_G0013129	Blm	58	62.892	Mus_pahari
ENSPFOG00000005059	blm	99	47.310	MGP_SPRETEiJ_G0031009	Blm	58	62.591	Mus_spretus
ENSPFOG00000005059	blm	50	67.107	ENSMPUG00000015657	BLM	55	71.351	Mustela_putorius_furo
ENSPFOG00000005059	blm	73	55.337	ENSMLUG00000014697	BLM	57	63.054	Myotis_lucifugus
ENSPFOG00000005059	blm	99	45.911	ENSNGAG00000001275	Blm	63	64.987	Nannospalax_galili
ENSPFOG00000005059	blm	100	69.133	ENSNBRG00000019702	blm	100	68.929	Neolamprologus_brichardi
ENSPFOG00000005059	blm	73	50.797	ENSNLEG00000012087	BLM	74	61.470	Nomascus_leucogenys
ENSPFOG00000005059	blm	79	49.369	ENSMEUG00000007253	BLM	84	61.784	Notamacropus_eugenii
ENSPFOG00000005059	blm	52	64.944	ENSOPRG00000011667	BLM	51	64.525	Ochotona_princeps
ENSPFOG00000005059	blm	74	50.812	ENSODEG00000015373	BLM	80	57.024	Octodon_degus
ENSPFOG00000005059	blm	99	68.323	ENSONIG00000015193	blm	100	68.461	Oreochromis_niloticus
ENSPFOG00000005059	blm	55	65.375	ENSOANG00000009316	-	99	65.116	Ornithorhynchus_anatinus
ENSPFOG00000005059	blm	87	64.615	ENSOCUG00000013969	BLM	61	63.928	Oryctolagus_cuniculus
ENSPFOG00000005059	blm	100	73.074	ENSORLG00000008110	blm	100	72.170	Oryzias_latipes
ENSPFOG00000005059	blm	100	73.146	ENSORLG00020004812	blm	100	72.314	Oryzias_latipes_hni
ENSPFOG00000005059	blm	100	72.786	ENSORLG00015018640	blm	100	73.821	Oryzias_latipes_hsok
ENSPFOG00000005059	blm	100	72.026	ENSOMEG00000023545	blm	100	72.026	Oryzias_melastigma
ENSPFOG00000005059	blm	61	63.427	ENSOGAG00000005708	BLM	56	63.359	Otolemur_garnettii
ENSPFOG00000005059	blm	64	64.917	ENSOARG00000012875	BLM	57	64.917	Ovis_aries
ENSPFOG00000005059	blm	74	53.581	ENSPPAG00000032173	BLM	54	73.975	Pan_paniscus
ENSPFOG00000005059	blm	84	64.834	ENSPPRG00000002471	BLM	59	73.006	Panthera_pardus
ENSPFOG00000005059	blm	84	64.322	ENSPTIG00000016168	BLM	59	72.764	Panthera_tigris_altaica
ENSPFOG00000005059	blm	59	65.256	ENSPTRG00000007460	BLM	54	73.922	Pan_troglodytes
ENSPFOG00000005059	blm	78	51.486	ENSPANG00000018572	BLM	75	76.066	Papio_anubis
ENSPFOG00000005059	blm	70	68.560	ENSPMGG00000006629	blm	100	69.200	Periophthalmus_magnuspinnatus
ENSPFOG00000005059	blm	55	65.681	ENSPEMG00000017348	Blm	55	65.553	Peromyscus_maniculatus_bairdii
ENSPFOG00000005059	blm	80	50.508	ENSPCIG00000006609	BLM	87	61.079	Phascolarctos_cinereus
ENSPFOG00000005059	blm	100	99.048	ENSPLAG00000017344	blm	100	99.048	Poecilia_latipinna
ENSPFOG00000005059	blm	100	99.707	ENSPMEG00000000321	blm	100	99.707	Poecilia_mexicana
ENSPFOG00000005059	blm	100	96.350	ENSPREG00000007715	blm	100	96.350	Poecilia_reticulata
ENSPFOG00000005059	blm	56	64.277	ENSPPYG00000006784	BLM	55	64.533	Pongo_abelii
ENSPFOG00000005059	blm	57	63.486	ENSPCAG00000008960	BLM	63	63.415	Procavia_capensis
ENSPFOG00000005059	blm	78	47.028	ENSPCOG00000000439	BLM	56	59.524	Propithecus_coquereli
ENSPFOG00000005059	blm	70	76.412	ENSPVAG00000011642	BLM	59	76.412	Pteropus_vampyrus
ENSPFOG00000005059	blm	100	60.772	ENSPNYG00000010956	blm	100	60.293	Pundamilia_nyererei
ENSPFOG00000005059	blm	100	57.550	ENSPNAG00000011714	blm	100	57.767	Pygocentrus_nattereri
ENSPFOG00000005059	blm	99	47.051	ENSRNOG00000011213	Blm	59	62.757	Rattus_norvegicus
ENSPFOG00000005059	blm	74	53.753	ENSRBIG00000029656	BLM	75	75.738	Rhinopithecus_bieti
ENSPFOG00000005059	blm	78	51.742	ENSRROG00000037871	BLM	75	75.738	Rhinopithecus_roxellana
ENSPFOG00000005059	blm	50	73.156	ENSSBOG00000030957	BLM	54	73.361	Saimiri_boliviensis_boliviensis
ENSPFOG00000005059	blm	88	62.000	ENSSHAG00000007988	BLM	86	61.827	Sarcophilus_harrisii
ENSPFOG00000005059	blm	76	63.749	ENSSFOG00015015462	blm	80	62.702	Scleropages_formosus
ENSPFOG00000005059	blm	100	68.750	ENSSMAG00000001120	blm	100	68.750	Scophthalmus_maximus
ENSPFOG00000005059	blm	100	70.919	ENSSDUG00000010955	blm	100	70.421	Seriola_dumerili
ENSPFOG00000005059	blm	100	70.114	ENSSLDG00000000634	blm	100	69.472	Seriola_lalandi_dorsalis
ENSPFOG00000005059	blm	60	60.281	ENSSARG00000006398	BLM	62	60.435	Sorex_araneus
ENSPFOG00000005059	blm	75	53.421	ENSSPUG00000000013	BLM	97	51.421	Sphenodon_punctatus
ENSPFOG00000005059	blm	99	70.704	ENSSPAG00000013999	blm	99	70.148	Stegastes_partitus
ENSPFOG00000005059	blm	68	65.385	ENSSSCG00000001816	BLM	64	67.729	Sus_scrofa
ENSPFOG00000005059	blm	79	46.749	ENSTGUG00000009959	-	80	57.143	Taeniopygia_guttata
ENSPFOG00000005059	blm	99	65.258	ENSTRUG00000019860	blm	99	64.921	Takifugu_rubripes
ENSPFOG00000005059	blm	93	69.291	ENSTNIG00000019246	blm	100	62.255	Tetraodon_nigroviridis
ENSPFOG00000005059	blm	79	51.826	ENSTTRG00000016386	BLM	63	65.508	Tursiops_truncatus
ENSPFOG00000005059	blm	64	65.296	ENSUMAG00000009105	BLM	96	67.452	Ursus_maritimus
ENSPFOG00000005059	blm	65	61.489	ENSVPAG00000000085	BLM	64	61.489	Vicugna_pacos
ENSPFOG00000005059	blm	52	77.236	ENSVVUG00000006402	BLM	56	77.236	Vulpes_vulpes
ENSPFOG00000005059	blm	99	47.275	ENSXETG00000007847	blm	55	67.136	Xenopus_tropicalis
ENSPFOG00000005059	blm	100	89.857	ENSXCOG00000020227	blm	100	89.857	Xiphophorus_couchianus
ENSPFOG00000005059	blm	100	94.161	ENSXMAG00000002951	blm	100	94.161	Xiphophorus_maculatus