EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000005616 (Gene tree)
Gene ID: 103146838
Gene Symbol: -
Alias: -
Full Name: transcriptional repressor scratch 1-like
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 8572 bases
Position: chrKI519779.1:858285-866856
Accession: 103146838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000005500	zf-C2H2	PF00096.26	2.4e-25	1	4
ENSPFOP00000005500	zf-C2H2	PF00096.26	2.4e-25	2	4
ENSPFOP00000005500	zf-C2H2	PF00096.26	2.4e-25	3	4
ENSPFOP00000005500	zf-C2H2	PF00096.26	2.4e-25	4	4
ENSPFOP00000021858	zf-C2H2	PF00096.26	3.6e-25	1	4
ENSPFOP00000021858	zf-C2H2	PF00096.26	3.6e-25	2	4
ENSPFOP00000021858	zf-C2H2	PF00096.26	3.6e-25	3	4
ENSPFOP00000021858	zf-C2H2	PF00096.26	3.6e-25	4	4
ENSPFOP00000005500	zf-met	PF12874.7	6.6e-09	1	1
ENSPFOP00000021858	zf-met	PF12874.7	9.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000005509	-	894	-	ENSPFOP00000005500	297 (aa)	XP_007564955	A0A087XI97
ENSPFOT00000022496	-	960	-	ENSPFOP00000021858	319 (aa)	-	A0A096LRR7

Gene Model

Click here to download ENSPFOG00000005616's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000005616's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000005616	-	51	34.677	ENSPFOG00000021869	-	77	34.677
ENSPFOG00000005616	-	51	38.298	ENSPFOG00000005289	-	95	37.879
ENSPFOG00000005616	-	96	32.013	ENSPFOG00000008667	-	98	35.069
ENSPFOG00000005616	-	56	43.836	ENSPFOG00000005592	-	100	43.836
ENSPFOG00000005616	-	99	76.431	ENSPFOG00000017719	scrt1b	99	76.431
ENSPFOG00000005616	-	50	36.134	ENSPFOG00000004826	-	99	36.134
ENSPFOG00000005616	-	96	32.500	ENSPFOG00000024581	-	100	32.500
ENSPFOG00000005616	-	100	58.841	ENSPFOG00000007738	scrt2	99	58.841

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000005616	-	100	62.416	ENSAPOG00000003680	scrt2	99	62.416	Acanthochromis_polyacanthus
ENSPFOG00000005616	-	99	76.768	ENSAPOG00000009279	scrt1b	99	76.768	Acanthochromis_polyacanthus
ENSPFOG00000005616	-	100	88.294	ENSAPOG00000015197	-	100	88.294	Acanthochromis_polyacanthus
ENSPFOG00000005616	-	99	76.094	ENSACIG00000013613	scrt1b	99	76.094	Amphilophus_citrinellus
ENSPFOG00000005616	-	100	94.314	ENSACIG00000006586	-	100	94.314	Amphilophus_citrinellus
ENSPFOG00000005616	-	100	62.290	ENSACIG00000012604	scrt2	99	62.290	Amphilophus_citrinellus
ENSPFOG00000005616	-	97	54.369	ENSACIG00000001296	-	96	53.994	Amphilophus_citrinellus
ENSPFOG00000005616	-	100	94.983	ENSAOCG00000023304	-	100	94.983	Amphiprion_ocellaris
ENSPFOG00000005616	-	100	62.416	ENSAOCG00000021557	scrt2	99	62.416	Amphiprion_ocellaris
ENSPFOG00000005616	-	99	76.768	ENSAOCG00000003910	scrt1b	99	76.768	Amphiprion_ocellaris
ENSPFOG00000005616	-	99	76.431	ENSAPEG00000000869	scrt1b	99	76.431	Amphiprion_percula
ENSPFOG00000005616	-	100	62.416	ENSAPEG00000022558	scrt2	99	62.416	Amphiprion_percula
ENSPFOG00000005616	-	100	94.983	ENSAPEG00000005677	-	100	94.983	Amphiprion_percula
ENSPFOG00000005616	-	97	53.823	ENSATEG00000003195	-	97	53.823	Anabas_testudineus
ENSPFOG00000005616	-	99	75.338	ENSATEG00000002302	scrt1b	99	76.431	Anabas_testudineus
ENSPFOG00000005616	-	100	60.182	ENSATEG00000023998	scrt2	99	59.878	Anabas_testudineus
ENSPFOG00000005616	-	100	85.619	ENSATEG00000011660	-	100	85.619	Anabas_testudineus
ENSPFOG00000005616	-	69	78.922	ENSACAG00000016109	SCRT2	91	78.922	Anolis_carolinensis
ENSPFOG00000005616	-	100	90.759	ENSACLG00000012046	-	100	90.759	Astatotilapia_calliptera
ENSPFOG00000005616	-	99	76.431	ENSACLG00000007162	scrt1b	99	76.431	Astatotilapia_calliptera
ENSPFOG00000005616	-	99	79.054	ENSAMXG00000038085	scrt1a	99	79.054	Astyanax_mexicanus
ENSPFOG00000005616	-	84	68.000	ENSAMXG00000034158	scrt2	93	64.419	Astyanax_mexicanus
ENSPFOG00000005616	-	99	72.819	ENSAMXG00000042624	SCRT1	100	72.819	Astyanax_mexicanus
ENSPFOG00000005616	-	55	59.509	WBGene00000468	ces-1	79	47.368	Caenorhabditis_elegans
ENSPFOG00000005616	-	87	58.052	ENSCPBG00000027613	SCRT2	100	58.052	Chrysemys_picta_bellii
ENSPFOG00000005616	-	99	76.094	ENSCPBG00000018899	SCRT1	99	76.094	Chrysemys_picta_bellii
ENSPFOG00000005616	-	100	60.991	ENSCSEG00000021542	scrt2	99	60.991	Cynoglossus_semilaevis
ENSPFOG00000005616	-	99	75.338	ENSCSEG00000008596	scrt1b	99	76.094	Cynoglossus_semilaevis
ENSPFOG00000005616	-	100	91.973	ENSCSEG00000014892	-	100	91.973	Cynoglossus_semilaevis
ENSPFOG00000005616	-	100	58.537	ENSCVAG00000021038	scrt2	99	58.537	Cyprinodon_variegatus
ENSPFOG00000005616	-	99	75.758	ENSCVAG00000009561	scrt1b	99	75.758	Cyprinodon_variegatus
ENSPFOG00000005616	-	100	95.652	ENSCVAG00000003190	-	100	95.652	Cyprinodon_variegatus
ENSPFOG00000005616	-	99	78.114	ENSDARG00000100821	scrt1a	99	78.114	Danio_rerio
ENSPFOG00000005616	-	99	76.094	ENSDARG00000040214	scrt1b	99	76.094	Danio_rerio
ENSPFOG00000005616	-	99	77.966	ENSELUG00000005435	scrt1b	98	77.966	Esox_lucius
ENSPFOG00000005616	-	96	61.688	ENSELUG00000023883	scrt2	95	60.714	Esox_lucius
ENSPFOG00000005616	-	100	77.258	ENSELUG00000022228	scrt1a	100	77.258	Esox_lucius
ENSPFOG00000005616	-	67	78.500	ENSFALG00000005718	SCRT2	83	79.000	Ficedula_albicollis
ENSPFOG00000005616	-	97	57.785	ENSFDAG00000008733	SCRT1	97	57.785	Fukomys_damarensis
ENSPFOG00000005616	-	100	63.880	ENSFHEG00000005732	scrt2	99	63.880	Fundulus_heteroclitus
ENSPFOG00000005616	-	100	96.321	ENSFHEG00000009794	-	100	96.321	Fundulus_heteroclitus
ENSPFOG00000005616	-	99	76.094	ENSFHEG00000014820	scrt1b	99	76.094	Fundulus_heteroclitus
ENSPFOG00000005616	-	97	56.604	ENSGMOG00000019519	scrt2	96	56.604	Gadus_morhua
ENSPFOG00000005616	-	56	96.825	ENSGMOG00000013833	-	56	96.825	Gadus_morhua
ENSPFOG00000005616	-	99	76.014	ENSGMOG00000000629	scrt1b	99	76.014	Gadus_morhua
ENSPFOG00000005616	-	97	61.379	ENSGALG00000028912	SCRT2	97	62.759	Gallus_gallus
ENSPFOG00000005616	-	99	76.431	ENSGAFG00000007636	scrt1b	99	76.431	Gambusia_affinis
ENSPFOG00000005616	-	100	60.759	ENSGAFG00000003093	scrt2	99	60.759	Gambusia_affinis
ENSPFOG00000005616	-	100	89.899	ENSGAFG00000009650	-	100	89.899	Gambusia_affinis
ENSPFOG00000005616	-	99	74.576	ENSGACG00000008982	scrt1b	99	74.576	Gasterosteus_aculeatus
ENSPFOG00000005616	-	100	88.294	ENSGACG00000004072	-	100	88.294	Gasterosteus_aculeatus
ENSPFOG00000005616	-	60	81.356	ENSGAGG00000020760	-	68	81.921	Gopherus_agassizii
ENSPFOG00000005616	-	96	62.500	ENSGAGG00000020761	SCRT2	96	62.847	Gopherus_agassizii
ENSPFOG00000005616	-	99	76.610	ENSGAGG00000011736	SCRT1	99	76.610	Gopherus_agassizii
ENSPFOG00000005616	-	97	63.322	ENSHBUG00000012492	scrt2	96	63.322	Haplochromis_burtoni
ENSPFOG00000005616	-	100	93.645	ENSHBUG00000019101	-	100	93.645	Haplochromis_burtoni
ENSPFOG00000005616	-	99	76.431	ENSHBUG00000016621	scrt1b	99	76.431	Haplochromis_burtoni
ENSPFOG00000005616	-	100	73.115	ENSHCOG00000016179	-	100	73.115	Hippocampus_comes
ENSPFOG00000005616	-	97	60.714	ENSHCOG00000008116	scrt2	97	60.714	Hippocampus_comes
ENSPFOG00000005616	-	99	76.094	ENSHCOG00000016704	scrt1b	99	76.094	Hippocampus_comes
ENSPFOG00000005616	-	99	71.088	ENSIPUG00000005547	-	100	71.088	Ictalurus_punctatus
ENSPFOG00000005616	-	98	78.912	ENSIPUG00000004551	scrt1a	99	78.912	Ictalurus_punctatus
ENSPFOG00000005616	-	99	76.094	ENSKMAG00000005484	scrt1b	99	76.094	Kryptolebias_marmoratus
ENSPFOG00000005616	-	100	59.649	ENSKMAG00000018087	scrt2	99	59.649	Kryptolebias_marmoratus
ENSPFOG00000005616	-	100	94.983	ENSKMAG00000009489	-	100	94.983	Kryptolebias_marmoratus
ENSPFOG00000005616	-	100	92.929	ENSLBEG00000023388	-	100	92.929	Labrus_bergylta
ENSPFOG00000005616	-	100	59.697	ENSLBEG00000015419	scrt2	99	59.394	Labrus_bergylta
ENSPFOG00000005616	-	99	75.084	ENSLACG00000003588	SCRT1	99	75.084	Latimeria_chalumnae
ENSPFOG00000005616	-	97	52.632	ENSLOCG00000002246	scrt2	97	53.750	Lepisosteus_oculatus
ENSPFOG00000005616	-	99	77.104	ENSLOCG00000007573	scrt1b	99	77.104	Lepisosteus_oculatus
ENSPFOG00000005616	-	96	91.852	ENSMFAG00000035496	SCRT1	89	85.621	Macaca_fascicularis
ENSPFOG00000005616	-	99	75.338	ENSMAMG00000011698	scrt1b	99	76.431	Mastacembelus_armatus
ENSPFOG00000005616	-	100	59.878	ENSMAMG00000001291	scrt2	99	59.878	Mastacembelus_armatus
ENSPFOG00000005616	-	99	76.431	ENSMZEG00005005627	scrt1b	99	76.431	Maylandia_zebra
ENSPFOG00000005616	-	100	93.645	ENSMZEG00005026702	-	100	93.645	Maylandia_zebra
ENSPFOG00000005616	-	97	63.322	ENSMZEG00005026445	scrt2	96	63.322	Maylandia_zebra
ENSPFOG00000005616	-	65	80.829	ENSMGAG00000016579	SCRT2	80	80.829	Meleagris_gallopavo
ENSPFOG00000005616	-	100	92.000	ENSMMOG00000018345	-	100	92.000	Mola_mola
ENSPFOG00000005616	-	100	59.509	ENSMMOG00000009272	scrt2	99	59.816	Mola_mola
ENSPFOG00000005616	-	99	74.747	ENSMMOG00000003327	scrt1b	99	74.747	Mola_mola
ENSPFOG00000005616	-	100	61.204	ENSMALG00000013656	scrt2	99	61.204	Monopterus_albus
ENSPFOG00000005616	-	99	76.014	ENSMALG00000012704	scrt1b	99	77.104	Monopterus_albus
ENSPFOG00000005616	-	61	68.108	ENSNGAG00000020815	Scrt2	91	67.368	Nannospalax_galili
ENSPFOG00000005616	-	100	62.081	ENSNBRG00000007221	scrt2	99	62.081	Neolamprologus_brichardi
ENSPFOG00000005616	-	100	93.980	ENSNBRG00000014882	-	100	93.980	Neolamprologus_brichardi
ENSPFOG00000005616	-	99	73.179	ENSNBRG00000013983	scrt1b	99	73.179	Neolamprologus_brichardi
ENSPFOG00000005616	-	97	57.639	ENSONIG00000003152	-	96	57.639	Oreochromis_niloticus
ENSPFOG00000005616	-	100	60.366	ENSONIG00000016758	scrt2	99	60.366	Oreochromis_niloticus
ENSPFOG00000005616	-	97	89.836	ENSONIG00000019809	-	100	89.836	Oreochromis_niloticus
ENSPFOG00000005616	-	99	76.094	ENSONIG00000006007	scrt1b	99	76.094	Oreochromis_niloticus
ENSPFOG00000005616	-	100	59.357	ENSORLG00000024051	scrt2	99	59.357	Oryzias_latipes
ENSPFOG00000005616	-	99	75.000	ENSORLG00000025651	scrt1b	99	75.758	Oryzias_latipes
ENSPFOG00000005616	-	100	90.365	ENSORLG00000022825	-	100	90.365	Oryzias_latipes
ENSPFOG00000005616	-	99	75.000	ENSORLG00020012967	scrt1b	99	75.758	Oryzias_latipes_hni
ENSPFOG00000005616	-	100	59.357	ENSORLG00020011478	scrt2	99	59.357	Oryzias_latipes_hni
ENSPFOG00000005616	-	99	75.000	ENSORLG00015019165	scrt1b	99	75.758	Oryzias_latipes_hsok
ENSPFOG00000005616	-	100	59.357	ENSORLG00015005524	scrt2	99	59.357	Oryzias_latipes_hsok
ENSPFOG00000005616	-	100	90.033	ENSORLG00015010104	-	100	90.033	Oryzias_latipes_hsok
ENSPFOG00000005616	-	99	75.000	ENSOMEG00000003925	scrt1b	99	75.758	Oryzias_melastigma
ENSPFOG00000005616	-	100	59.756	ENSOMEG00000002661	scrt2	99	59.756	Oryzias_melastigma
ENSPFOG00000005616	-	100	91.919	ENSOMEG00000000286	-	100	91.919	Oryzias_melastigma
ENSPFOG00000005616	-	99	77.778	ENSPKIG00000020085	scrt1a	99	77.778	Paramormyrops_kingsleyae
ENSPFOG00000005616	-	99	77.104	ENSPKIG00000022303	SCRT1	99	77.104	Paramormyrops_kingsleyae
ENSPFOG00000005616	-	100	87.625	ENSPMGG00000021402	-	100	87.625	Periophthalmus_magnuspinnatus
ENSPFOG00000005616	-	100	63.758	ENSPMGG00000016561	scrt2	99	63.758	Periophthalmus_magnuspinnatus
ENSPFOG00000005616	-	99	73.401	ENSPMGG00000002260	scrt1b	99	73.401	Periophthalmus_magnuspinnatus
ENSPFOG00000005616	-	100	100.000	ENSPLAG00000011718	-	100	100.000	Poecilia_latipinna
ENSPFOG00000005616	-	99	76.431	ENSPLAG00000009876	scrt1b	99	76.431	Poecilia_latipinna
ENSPFOG00000005616	-	100	63.423	ENSPLAG00000005765	scrt2	99	63.423	Poecilia_latipinna
ENSPFOG00000005616	-	100	100.000	ENSPMEG00000011706	-	100	100.000	Poecilia_mexicana
ENSPFOG00000005616	-	100	63.423	ENSPMEG00000001538	scrt2	99	63.423	Poecilia_mexicana
ENSPFOG00000005616	-	99	76.431	ENSPMEG00000013274	scrt1b	99	76.431	Poecilia_mexicana
ENSPFOG00000005616	-	99	76.431	ENSPREG00000018985	scrt1b	99	76.431	Poecilia_reticulata
ENSPFOG00000005616	-	100	58.841	ENSPREG00000001147	scrt2	99	58.841	Poecilia_reticulata
ENSPFOG00000005616	-	100	99.327	ENSPREG00000012166	-	100	99.327	Poecilia_reticulata
ENSPFOG00000005616	-	97	63.322	ENSPNYG00000013109	scrt2	96	63.322	Pundamilia_nyererei
ENSPFOG00000005616	-	99	76.431	ENSPNYG00000017733	scrt1b	99	76.431	Pundamilia_nyererei
ENSPFOG00000005616	-	100	93.311	ENSPNYG00000008865	-	100	93.311	Pundamilia_nyererei
ENSPFOG00000005616	-	99	73.737	ENSPNAG00000027880	-	100	74.074	Pygocentrus_nattereri
ENSPFOG00000005616	-	99	78.378	ENSPNAG00000017415	scrt1a	99	78.378	Pygocentrus_nattereri
ENSPFOG00000005616	-	99	76.768	ENSSFOG00015001195	SCRT1	99	76.768	Scleropages_formosus
ENSPFOG00000005616	-	100	90.397	ENSSMAG00000005122	-	100	90.397	Scophthalmus_maximus
ENSPFOG00000005616	-	100	76.923	ENSSMAG00000019207	scrt1b	100	76.923	Scophthalmus_maximus
ENSPFOG00000005616	-	100	61.270	ENSSDUG00000001637	scrt2	98	61.270	Seriola_dumerili
ENSPFOG00000005616	-	99	76.768	ENSSDUG00000007752	scrt1b	99	76.768	Seriola_dumerili
ENSPFOG00000005616	-	100	95.987	ENSSDUG00000013215	-	100	95.987	Seriola_dumerili
ENSPFOG00000005616	-	100	95.987	ENSSLDG00000016454	-	100	95.987	Seriola_lalandi_dorsalis
ENSPFOG00000005616	-	100	59.878	ENSSLDG00000013565	scrt2	99	59.271	Seriola_lalandi_dorsalis
ENSPFOG00000005616	-	99	76.768	ENSSLDG00000017166	scrt1b	99	76.768	Seriola_lalandi_dorsalis
ENSPFOG00000005616	-	97	62.500	ENSSPUG00000018637	SCRT2	97	62.500	Sphenodon_punctatus
ENSPFOG00000005616	-	99	76.768	ENSSPAG00000002200	scrt1b	99	76.768	Stegastes_partitus
ENSPFOG00000005616	-	100	94.649	ENSSPAG00000006788	-	100	94.649	Stegastes_partitus
ENSPFOG00000005616	-	100	62.752	ENSSPAG00000014018	scrt2	99	62.752	Stegastes_partitus
ENSPFOG00000005616	-	67	78.392	ENSTGUG00000006801	SCRT2	86	78.894	Taeniopygia_guttata
ENSPFOG00000005616	-	87	82.946	ENSTRUG00000019558	-	83	83.142	Takifugu_rubripes
ENSPFOG00000005616	-	99	75.676	ENSTRUG00000011637	scrt1b	100	75.676	Takifugu_rubripes
ENSPFOG00000005616	-	100	90.635	ENSTRUG00000012719	-	100	91.304	Takifugu_rubripes
ENSPFOG00000005616	-	97	61.716	ENSTRUG00000007620	scrt2	97	61.716	Takifugu_rubripes
ENSPFOG00000005616	-	99	75.758	ENSTNIG00000018384	scrt1b	99	75.758	Tetraodon_nigroviridis
ENSPFOG00000005616	-	100	63.000	ENSTNIG00000012473	scrt2	100	63.000	Tetraodon_nigroviridis
ENSPFOG00000005616	-	100	60.063	ENSXCOG00000014367	scrt2	99	60.127	Xiphophorus_couchianus
ENSPFOG00000005616	-	100	89.226	ENSXCOG00000019861	-	100	89.226	Xiphophorus_couchianus
ENSPFOG00000005616	-	99	76.768	ENSXCOG00000019675	scrt1b	99	76.768	Xiphophorus_couchianus
ENSPFOG00000005616	-	99	76.768	ENSXMAG00000027885	scrt1b	99	76.768	Xiphophorus_maculatus
ENSPFOG00000005616	-	100	99.327	ENSXMAG00000015353	-	100	99.327	Xiphophorus_maculatus
ENSPFOG00000005616	-	100	58.232	ENSXMAG00000028567	scrt2	99	58.232	Xiphophorus_maculatus