EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000005704 (Gene tree)
Gene ID: 103145628
Gene Symbol: srrt
Alias: -
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 8737 bases
Position: chrKI519755.1:357760-366496
Accession: 103145628
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000005702	ARS2	PF04959.13	7.5e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000005711	-	2951	XM_007563139	ENSPFOP00000005702	878 (aa)	XP_007563201	A0A087XIU9

Gene Model

Click here to download ENSPFOG00000005704's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000005704's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000005704	srrt	93	52.682	ENSPFOG00000016554	-	54	65.293

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000005704	srrt	51	75.817	ENSG00000087087	SRRT	98	85.484	Homo_sapiens
ENSPFOG00000005704	srrt	95	90.261	ENSAPOG00000002304	srrt	95	89.549	Acanthochromis_polyacanthus
ENSPFOG00000005704	srrt	96	65.212	ENSAMEG00000014506	SRRT	51	76.096	Ailuropoda_melanoleuca
ENSPFOG00000005704	srrt	86	91.405	ENSACIG00000015795	srrt	94	91.703	Amphilophus_citrinellus
ENSPFOG00000005704	srrt	93	56.599	ENSAOCG00000009189	-	52	67.974	Amphiprion_ocellaris
ENSPFOG00000005704	srrt	95	90.119	ENSAOCG00000009693	srrt	95	89.405	Amphiprion_ocellaris
ENSPFOG00000005704	srrt	95	89.643	ENSAPEG00000003646	srrt	95	88.929	Amphiprion_percula
ENSPFOG00000005704	srrt	93	56.599	ENSAPEG00000020016	-	52	67.974	Amphiprion_percula
ENSPFOG00000005704	srrt	52	66.098	ENSATEG00000003652	-	85	67.457	Anabas_testudineus
ENSPFOG00000005704	srrt	95	87.232	ENSATEG00000014425	srrt	95	87.232	Anabas_testudineus
ENSPFOG00000005704	srrt	95	65.566	ENSACAG00000001014	SRRT	95	65.083	Anolis_carolinensis
ENSPFOG00000005704	srrt	51	74.678	ENSANAG00000031718	SRRT	53	74.678	Aotus_nancymaae
ENSPFOG00000005704	srrt	95	87.008	ENSACLG00000013156	srrt	92	87.723	Astatotilapia_calliptera
ENSPFOG00000005704	srrt	93	57.297	ENSACLG00000009423	-	52	66.739	Astatotilapia_calliptera
ENSPFOG00000005704	srrt	96	63.761	ENSBTAG00000001134	SRRT	53	74.249	Bos_taurus
ENSPFOG00000005704	srrt	61	45.833	WBGene00017085	E01A2.2	85	42.405	Caenorhabditis_elegans
ENSPFOG00000005704	srrt	51	74.034	ENSCJAG00000014917	SRRT	53	74.464	Callithrix_jacchus
ENSPFOG00000005704	srrt	96	63.353	ENSCAFG00000023538	SRRT	53	74.249	Canis_familiaris
ENSPFOG00000005704	srrt	98	63.110	ENSCAFG00020013358	SRRT	52	76.106	Canis_lupus_dingo
ENSPFOG00000005704	srrt	88	74.569	ENSCHIG00000010495	SRRT	87	74.569	Capra_hircus
ENSPFOG00000005704	srrt	96	62.153	ENSTSYG00000036426	SRRT	56	74.730	Carlito_syrichta
ENSPFOG00000005704	srrt	51	75.658	ENSCAPG00000013586	SRRT	89	70.526	Cavia_aperea
ENSPFOG00000005704	srrt	96	63.963	ENSCPOG00000001739	SRRT	53	74.090	Cavia_porcellus
ENSPFOG00000005704	srrt	51	74.678	ENSCCAG00000015877	SRRT	53	74.678	Cebus_capucinus
ENSPFOG00000005704	srrt	51	74.730	ENSCATG00000036306	SRRT	53	74.730	Cercocebus_atys
ENSPFOG00000005704	srrt	96	63.615	ENSCLAG00000007568	SRRT	89	70.940	Chinchilla_lanigera
ENSPFOG00000005704	srrt	51	74.678	ENSCSAG00000017996	SRRT	53	74.678	Chlorocebus_sabaeus
ENSPFOG00000005704	srrt	51	74.074	ENSCHOG00000007815	SRRT	62	73.529	Choloepus_hoffmanni
ENSPFOG00000005704	srrt	73	67.925	ENSCPBG00000011553	SRRT	84	63.345	Chrysemys_picta_bellii
ENSPFOG00000005704	srrt	100	41.858	ENSCING00000003506	-	54	50.830	Ciona_intestinalis
ENSPFOG00000005704	srrt	100	42.699	ENSCSAVG00000008394	-	81	56.734	Ciona_savignyi
ENSPFOG00000005704	srrt	51	74.946	ENSCANG00000034556	SRRT	53	74.946	Colobus_angolensis_palliatus
ENSPFOG00000005704	srrt	96	64.277	ENSCGRG00001001594	Srrt	53	74.893	Cricetulus_griseus_chok1gshd
ENSPFOG00000005704	srrt	96	59.862	ENSCGRG00000007292	Srrt	87	74.359	Cricetulus_griseus_crigri
ENSPFOG00000005704	srrt	74	65.171	ENSCSEG00000005233	-	78	65.795	Cynoglossus_semilaevis
ENSPFOG00000005704	srrt	98	77.356	ENSCSEG00000017878	srrt	95	77.503	Cynoglossus_semilaevis
ENSPFOG00000005704	srrt	95	92.491	ENSCVAG00000019848	srrt	95	92.491	Cyprinodon_variegatus
ENSPFOG00000005704	srrt	90	54.512	ENSCVAG00000017344	-	52	65.517	Cyprinodon_variegatus
ENSPFOG00000005704	srrt	96	77.257	ENSDARG00000017762	srrt	95	77.438	Danio_rerio
ENSPFOG00000005704	srrt	51	74.678	ENSDNOG00000003851	SRRT	53	74.678	Dasypus_novemcinctus
ENSPFOG00000005704	srrt	96	64.849	ENSDORG00000005584	Srrt	89	71.983	Dipodomys_ordii
ENSPFOG00000005704	srrt	100	47.069	FBgn0033062	Ars2	69	52.979	Drosophila_melanogaster
ENSPFOG00000005704	srrt	74	71.941	ENSETEG00000016175	SRRT	71	72.078	Echinops_telfairi
ENSPFOG00000005704	srrt	60	62.907	ENSEBUG00000008517	-	76	62.907	Eptatretus_burgeri
ENSPFOG00000005704	srrt	96	63.899	ENSEASG00005016956	SRRT	53	74.678	Equus_asinus_asinus
ENSPFOG00000005704	srrt	96	63.899	ENSECAG00000012292	SRRT	53	74.678	Equus_caballus
ENSPFOG00000005704	srrt	81	77.083	ENSEEUG00000009117	SRRT	57	82.432	Erinaceus_europaeus
ENSPFOG00000005704	srrt	93	58.649	ENSELUG00000021216	-	53	68.803	Esox_lucius
ENSPFOG00000005704	srrt	96	63.668	ENSFCAG00000006855	SRRT	53	74.678	Felis_catus
ENSPFOG00000005704	srrt	51	71.965	ENSFDAG00000021347	SRRT	88	69.316	Fukomys_damarensis
ENSPFOG00000005704	srrt	53	57.764	ENSFHEG00000004105	-	93	57.749	Fundulus_heteroclitus
ENSPFOG00000005704	srrt	76	96.032	ENSFHEG00000002756	srrt	90	96.032	Fundulus_heteroclitus
ENSPFOG00000005704	srrt	70	64.336	ENSGMOG00000018694	-	84	60.521	Gadus_morhua
ENSPFOG00000005704	srrt	96	74.763	ENSGMOG00000018619	srrt	51	79.386	Gadus_morhua
ENSPFOG00000005704	srrt	100	97.950	ENSGAFG00000005423	srrt	100	97.950	Gambusia_affinis
ENSPFOG00000005704	srrt	93	52.248	ENSGAFG00000020383	-	54	64.348	Gambusia_affinis
ENSPFOG00000005704	srrt	93	55.489	ENSGACG00000001100	-	52	64.410	Gasterosteus_aculeatus
ENSPFOG00000005704	srrt	96	84.670	ENSGACG00000020387	srrt	95	84.379	Gasterosteus_aculeatus
ENSPFOG00000005704	srrt	51	74.946	ENSGGOG00000001508	SRRT	63	66.492	Gorilla_gorilla
ENSPFOG00000005704	srrt	95	87.128	ENSHBUG00000002942	srrt	92	87.843	Haplochromis_burtoni
ENSPFOG00000005704	srrt	96	63.668	ENSHGLG00000008344	Srrt	89	70.726	Heterocephalus_glaber_female
ENSPFOG00000005704	srrt	96	64.037	ENSHGLG00100018857	Srrt	89	71.490	Heterocephalus_glaber_male
ENSPFOG00000005704	srrt	98	82.072	ENSHCOG00000005403	srrt	95	81.243	Hippocampus_comes
ENSPFOG00000005704	srrt	93	54.823	ENSHCOG00000008904	-	89	63.877	Hippocampus_comes
ENSPFOG00000005704	srrt	93	74.427	ENSIPUG00000021150	srrt	95	74.178	Ictalurus_punctatus
ENSPFOG00000005704	srrt	96	64.212	ENSSTOG00000013776	SRRT	53	74.946	Ictidomys_tridecemlineatus
ENSPFOG00000005704	srrt	96	64.720	ENSJJAG00000010446	Srrt	89	71.922	Jaculus_jaculus
ENSPFOG00000005704	srrt	95	86.714	ENSKMAG00000013599	srrt	95	86.833	Kryptolebias_marmoratus
ENSPFOG00000005704	srrt	52	64.990	ENSKMAG00000008468	-	53	65.328	Kryptolebias_marmoratus
ENSPFOG00000005704	srrt	98	81.293	ENSLBEG00000016308	srrt	54	89.440	Labrus_bergylta
ENSPFOG00000005704	srrt	95	55.751	ENSLACG00000001089	SRRT	53	58.009	Latimeria_chalumnae
ENSPFOG00000005704	srrt	91	55.825	ENSLOCG00000013658	srrt	76	83.281	Lepisosteus_oculatus
ENSPFOG00000005704	srrt	51	74.893	ENSLAFG00000007725	SRRT	53	74.893	Loxodonta_africana
ENSPFOG00000005704	srrt	51	74.946	ENSMFAG00000033745	SRRT	56	73.207	Macaca_fascicularis
ENSPFOG00000005704	srrt	96	62.887	ENSMMUG00000021255	SRRT	53	74.678	Macaca_mulatta
ENSPFOG00000005704	srrt	51	74.678	ENSMNEG00000041864	SRRT	53	74.678	Macaca_nemestrina
ENSPFOG00000005704	srrt	51	74.946	ENSMLEG00000029479	SRRT	55	73.207	Mandrillus_leucophaeus
ENSPFOG00000005704	srrt	93	57.473	ENSMAMG00000010681	-	52	68.764	Mastacembelus_armatus
ENSPFOG00000005704	srrt	95	87.828	ENSMAMG00000014311	srrt	95	87.232	Mastacembelus_armatus
ENSPFOG00000005704	srrt	93	57.416	ENSMZEG00005028002	-	52	66.957	Maylandia_zebra
ENSPFOG00000005704	srrt	95	87.128	ENSMZEG00005016135	srrt	92	87.843	Maylandia_zebra
ENSPFOG00000005704	srrt	51	74.249	ENSMAUG00000011386	Srrt	89	70.913	Mesocricetus_auratus
ENSPFOG00000005704	srrt	51	74.678	ENSMICG00000009471	SRRT	55	73.207	Microcebus_murinus
ENSPFOG00000005704	srrt	96	64.550	ENSMOCG00000001971	Srrt	89	70.526	Microtus_ochrogaster
ENSPFOG00000005704	srrt	83	56.971	ENSMMOG00000011137	-	55	67.462	Mola_mola
ENSPFOG00000005704	srrt	51	71.429	ENSMODG00000004862	SRRT	89	71.642	Monodelphis_domestica
ENSPFOG00000005704	srrt	90	80.774	ENSMALG00000018604	srrt	99	77.725	Monopterus_albus
ENSPFOG00000005704	srrt	56	51.000	ENSMALG00000005567	-	84	54.626	Monopterus_albus
ENSPFOG00000005704	srrt	96	65.380	MGP_CAROLIEiJ_G0027870	Srrt	99	72.119	Mus_caroli
ENSPFOG00000005704	srrt	96	65.380	ENSMUSG00000037364	Srrt	99	72.119	Mus_musculus
ENSPFOG00000005704	srrt	96	65.687	MGP_PahariEiJ_G0024456	Srrt	99	72.119	Mus_pahari
ENSPFOG00000005704	srrt	96	65.380	MGP_SPRETEiJ_G0028875	Srrt	99	72.119	Mus_spretus
ENSPFOG00000005704	srrt	96	64.245	ENSMPUG00000015839	SRRT	53	74.678	Mustela_putorius_furo
ENSPFOG00000005704	srrt	51	74.464	ENSMLUG00000009975	SRRT	53	74.464	Myotis_lucifugus
ENSPFOG00000005704	srrt	96	64.925	ENSNGAG00000023715	Srrt	64	74.678	Nannospalax_galili
ENSPFOG00000005704	srrt	98	85.714	ENSNBRG00000019100	srrt	95	86.038	Neolamprologus_brichardi
ENSPFOG00000005704	srrt	51	65.055	ENSNLEG00000011987	SRRT	54	64.565	Nomascus_leucogenys
ENSPFOG00000005704	srrt	96	54.239	ENSMEUG00000011941	SRRT	52	61.505	Notamacropus_eugenii
ENSPFOG00000005704	srrt	61	73.485	ENSOPRG00000002502	-	67	75.000	Ochotona_princeps
ENSPFOG00000005704	srrt	51	75.877	ENSODEG00000016856	SRRT	89	71.706	Octodon_degus
ENSPFOG00000005704	srrt	95	85.595	ENSONIG00000004242	srrt	95	82.947	Oreochromis_niloticus
ENSPFOG00000005704	srrt	93	57.601	ENSONIG00000016080	-	52	67.888	Oreochromis_niloticus
ENSPFOG00000005704	srrt	98	85.332	ENSORLG00000008120	srrt	95	84.606	Oryzias_latipes
ENSPFOG00000005704	srrt	98	85.099	ENSORLG00020003058	srrt	95	84.368	Oryzias_latipes_hni
ENSPFOG00000005704	srrt	98	84.983	ENSORLG00015008062	srrt	95	84.248	Oryzias_latipes_hsok
ENSPFOG00000005704	srrt	98	86.030	ENSOMEG00000003155	srrt	95	85.203	Oryzias_melastigma
ENSPFOG00000005704	srrt	93	59.466	ENSOMEG00000006963	-	53	67.615	Oryzias_melastigma
ENSPFOG00000005704	srrt	51	74.678	ENSOGAG00000017242	SRRT	53	74.678	Otolemur_garnettii
ENSPFOG00000005704	srrt	51	74.514	ENSOARG00000015645	SRRT	53	74.514	Ovis_aries
ENSPFOG00000005704	srrt	51	74.946	ENSPPAG00000041090	SRRT	53	74.946	Pan_paniscus
ENSPFOG00000005704	srrt	96	63.657	ENSPPRG00000009557	SRRT	53	74.730	Panthera_pardus
ENSPFOG00000005704	srrt	96	63.783	ENSPTIG00000014355	SRRT	53	74.678	Panthera_tigris_altaica
ENSPFOG00000005704	srrt	51	74.946	ENSPTRG00000019511	SRRT	53	74.946	Pan_troglodytes
ENSPFOG00000005704	srrt	51	73.207	ENSPANG00000020763	SRRT	54	73.207	Papio_anubis
ENSPFOG00000005704	srrt	98	73.439	ENSPKIG00000005434	srrt	95	73.450	Paramormyrops_kingsleyae
ENSPFOG00000005704	srrt	94	71.068	ENSPKIG00000022212	-	52	80.659	Paramormyrops_kingsleyae
ENSPFOG00000005704	srrt	51	76.211	ENSPSIG00000016311	SRRT	52	76.211	Pelodiscus_sinensis
ENSPFOG00000005704	srrt	98	76.843	ENSPMGG00000002841	srrt	56	87.097	Periophthalmus_magnuspinnatus
ENSPFOG00000005704	srrt	96	65.029	ENSPEMG00000010834	Srrt	89	71.706	Peromyscus_maniculatus_bairdii
ENSPFOG00000005704	srrt	96	54.682	ENSPMAG00000009614	-	55	63.291	Petromyzon_marinus
ENSPFOG00000005704	srrt	96	63.837	ENSPCIG00000000816	SRRT	53	72.650	Phascolarctos_cinereus
ENSPFOG00000005704	srrt	52	64.719	ENSPLAG00000004526	-	55	64.935	Poecilia_latipinna
ENSPFOG00000005704	srrt	100	97.858	ENSPLAG00000021992	srrt	100	97.858	Poecilia_latipinna
ENSPFOG00000005704	srrt	100	99.544	ENSPMEG00000001182	srrt	100	99.544	Poecilia_mexicana
ENSPFOG00000005704	srrt	100	98.975	ENSPREG00000022308	srrt	100	98.975	Poecilia_reticulata
ENSPFOG00000005704	srrt	51	72.785	ENSPCAG00000001621	SRRT	53	72.785	Procavia_capensis
ENSPFOG00000005704	srrt	51	74.946	ENSPCOG00000025751	SRRT	53	74.946	Propithecus_coquereli
ENSPFOG00000005704	srrt	68	66.524	ENSPVAG00000000834	SRRT	90	66.524	Pteropus_vampyrus
ENSPFOG00000005704	srrt	95	87.008	ENSPNYG00000018710	srrt	95	87.723	Pundamilia_nyererei
ENSPFOG00000005704	srrt	84	64.240	ENSPNAG00000010629	srrt	94	61.208	Pygocentrus_nattereri
ENSPFOG00000005704	srrt	51	65.142	ENSRNOG00000048277	AABR07035787.1	92	65.142	Rattus_norvegicus
ENSPFOG00000005704	srrt	51	74.678	ENSRBIG00000035718	SRRT	67	67.742	Rhinopithecus_bieti
ENSPFOG00000005704	srrt	51	74.678	ENSRROG00000030622	SRRT	67	67.742	Rhinopithecus_roxellana
ENSPFOG00000005704	srrt	51	74.946	ENSSBOG00000033570	SRRT	53	74.946	Saimiri_boliviensis_boliviensis
ENSPFOG00000005704	srrt	72	60.555	ENSSHAG00000007349	-	74	72.128	Sarcophilus_harrisii
ENSPFOG00000005704	srrt	94	76.576	ENSSFOG00015017293	srrt	95	76.706	Scleropages_formosus
ENSPFOG00000005704	srrt	95	88.186	ENSSMAG00000015342	srrt	95	91.685	Scophthalmus_maximus
ENSPFOG00000005704	srrt	51	65.227	ENSSMAG00000018195	-	57	65.227	Scophthalmus_maximus
ENSPFOG00000005704	srrt	52	56.476	ENSSDUG00000002051	-	93	57.296	Seriola_dumerili
ENSPFOG00000005704	srrt	95	90.573	ENSSDUG00000012049	srrt	91	90.573	Seriola_dumerili
ENSPFOG00000005704	srrt	83	91.912	ENSSLDG00000017477	srrt	87	91.912	Seriola_lalandi_dorsalis
ENSPFOG00000005704	srrt	51	59.002	ENSSPAG00000018943	-	93	58.568	Stegastes_partitus
ENSPFOG00000005704	srrt	95	89.087	ENSSPAG00000005665	srrt	94	88.375	Stegastes_partitus
ENSPFOG00000005704	srrt	89	54.156	ENSTRUG00000000023	-	51	62.615	Takifugu_rubripes
ENSPFOG00000005704	srrt	98	82.102	ENSTRUG00000016075	srrt	95	82.130	Takifugu_rubripes
ENSPFOG00000005704	srrt	74	76.347	ENSTNIG00000011779	srrt	73	85.319	Tetraodon_nigroviridis
ENSPFOG00000005704	srrt	93	54.303	ENSTNIG00000003111	-	53	64.035	Tetraodon_nigroviridis
ENSPFOG00000005704	srrt	59	77.401	ENSTBEG00000005212	SRRT	57	77.401	Tupaia_belangeri
ENSPFOG00000005704	srrt	51	74.464	ENSTTRG00000011104	SRRT	53	74.464	Tursiops_truncatus
ENSPFOG00000005704	srrt	96	63.542	ENSUAMG00000027997	SRRT	55	74.678	Ursus_americanus
ENSPFOG00000005704	srrt	96	63.668	ENSUMAG00000011295	SRRT	53	74.678	Ursus_maritimus
ENSPFOG00000005704	srrt	96	63.353	ENSVVUG00000023572	SRRT	53	74.249	Vulpes_vulpes
ENSPFOG00000005704	srrt	72	76.404	ENSXETG00000025124	srrt	93	67.872	Xenopus_tropicalis
ENSPFOG00000005704	srrt	53	52.854	ENSXCOG00000013105	-	91	53.879	Xiphophorus_couchianus
ENSPFOG00000005704	srrt	93	52.555	ENSXMAG00000002090	-	54	65.870	Xiphophorus_maculatus
ENSPFOG00000005704	srrt	100	97.950	ENSXMAG00000007627	srrt	100	97.950	Xiphophorus_maculatus