EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000005750 (Gene tree)
Gene ID: 103143484
Gene Symbol: -
Alias: -
Full Name: probable ATP-dependent RNA helicase ddx6
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 11417 bases
Position: chrKI519722.1:1641740-1653156
Accession: 103143484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000005716	DEAD	PF00270.29	2.9e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000005725	-	5040	XM_007560045	ENSPFOP00000005716	481 (aa)	XP_007560107	A0A087XIW3

Gene Model

Click here to download ENSPFOG00000005750's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000005750's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000005750	-	77	31.000	ENSPFOG00000009850	-	56	31.000
ENSPFOG00000005750	-	74	30.623	ENSPFOG00000012217	ddx27	50	30.623
ENSPFOG00000005750	-	70	40.678	ENSPFOG00000011921	ddx1	53	40.678
ENSPFOG00000005750	-	76	36.649	ENSPFOG00000008754	zgc:193690	77	36.649
ENSPFOG00000005750	-	73	33.799	ENSPFOG00000000870	ddx49	75	33.799
ENSPFOG00000005750	-	96	82.563	ENSPFOG00000010555	ddx6	98	82.563
ENSPFOG00000005750	-	74	31.165	ENSPFOG00000024441	DDX41	59	31.622
ENSPFOG00000005750	-	67	31.722	ENSPFOG00000000969	ddx18	53	31.722
ENSPFOG00000005750	-	76	36.649	ENSPFOG00000007233	zgc:193690	77	36.649
ENSPFOG00000005750	-	82	35.088	ENSPFOG00000000914	ddx39aa	93	35.088
ENSPFOG00000005750	-	82	35.338	ENSPFOG00000010070	DDX39A	93	35.338
ENSPFOG00000005750	-	77	30.695	ENSPFOG00000004599	-	56	30.695
ENSPFOG00000005750	-	68	32.153	ENSPFOG00000011861	-	71	30.537
ENSPFOG00000005750	-	80	31.954	ENSPFOG00000012159	ddx23	54	31.963
ENSPFOG00000005750	-	77	39.247	ENSPFOG00000012406	eif4a1b	92	39.247
ENSPFOG00000005750	-	78	37.566	ENSPFOG00000009300	eif4a3	90	37.566
ENSPFOG00000005750	-	80	32.663	ENSPFOG00000010540	ddx20	51	32.663
ENSPFOG00000005750	-	72	36.212	ENSPFOG00000015490	ddx19	72	36.212
ENSPFOG00000005750	-	72	31.148	ENSPFOG00000018842	ddx4	56	31.148
ENSPFOG00000005750	-	77	40.323	ENSPFOG00000004507	eif4a2	90	40.323

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000005750	-	78	96.000	ENSAPOG00000023627	-	95	96.000	Acanthochromis_polyacanthus
ENSPFOG00000005750	-	98	86.542	ENSAPOG00000014829	ddx61	99	86.542	Acanthochromis_polyacanthus
ENSPFOG00000005750	-	100	85.685	ENSACIG00000018355	-	100	85.685	Amphilophus_citrinellus
ENSPFOG00000005750	-	100	92.245	ENSAOCG00000006269	-	100	92.843	Amphiprion_ocellaris
ENSPFOG00000005750	-	98	87.344	ENSAOCG00000007627	ddx61	99	87.344	Amphiprion_ocellaris
ENSPFOG00000005750	-	98	87.344	ENSAPEG00000007293	ddx61	99	87.344	Amphiprion_percula
ENSPFOG00000005750	-	100	92.245	ENSAPEG00000020642	-	100	92.843	Amphiprion_percula
ENSPFOG00000005750	-	100	92.245	ENSAPEG00000021368	-	100	92.843	Amphiprion_percula
ENSPFOG00000005750	-	98	86.639	ENSATEG00000011302	ddx61	99	86.639	Anabas_testudineus
ENSPFOG00000005750	-	100	91.616	ENSATEG00000005424	-	100	91.616	Anabas_testudineus
ENSPFOG00000005750	-	100	92.886	ENSACLG00000003260	-	100	92.886	Astatotilapia_calliptera
ENSPFOG00000005750	-	98	86.875	ENSACLG00000027620	ddx61	99	86.875	Astatotilapia_calliptera
ENSPFOG00000005750	-	98	89.441	ENSAMXG00000033980	-	98	89.441	Astyanax_mexicanus
ENSPFOG00000005750	-	96	88.034	ENSAMXG00000032542	ddx61	99	85.979	Astyanax_mexicanus
ENSPFOG00000005750	-	100	90.650	ENSCSEG00000009893	-	100	90.650	Cynoglossus_semilaevis
ENSPFOG00000005750	-	100	96.266	ENSCVAG00000011006	-	100	96.266	Cyprinodon_variegatus
ENSPFOG00000005750	-	98	86.279	ENSDARG00000018425	ddx61	99	86.279	Danio_rerio
ENSPFOG00000005750	-	99	88.548	ENSELUG00000022538	-	99	88.548	Esox_lucius
ENSPFOG00000005750	-	96	89.574	ENSELUG00000020545	ddx61	96	89.574	Esox_lucius
ENSPFOG00000005750	-	100	96.473	ENSFHEG00000015487	-	100	96.473	Fundulus_heteroclitus
ENSPFOG00000005750	-	96	87.686	ENSGMOG00000013762	ddx61	100	86.486	Gadus_morhua
ENSPFOG00000005750	-	66	85.410	ENSGMOG00000003561	-	100	86.850	Gadus_morhua
ENSPFOG00000005750	-	100	99.172	ENSGAFG00000015865	-	100	99.172	Gambusia_affinis
ENSPFOG00000005750	-	99	91.097	ENSGACG00000002413	-	100	91.097	Gasterosteus_aculeatus
ENSPFOG00000005750	-	96	86.920	ENSGACG00000003401	ddx61	98	86.920	Gasterosteus_aculeatus
ENSPFOG00000005750	-	100	92.886	ENSHBUG00000017033	-	100	92.886	Haplochromis_burtoni
ENSPFOG00000005750	-	98	87.083	ENSHBUG00000017832	ddx61	99	87.083	Haplochromis_burtoni
ENSPFOG00000005750	-	100	86.503	ENSHCOG00000012238	-	100	86.503	Hippocampus_comes
ENSPFOG00000005750	-	97	84.926	ENSHCOG00000008184	ddx61	98	84.926	Hippocampus_comes
ENSPFOG00000005750	-	96	85.961	ENSIPUG00000012823	DDX6	99	84.632	Ictalurus_punctatus
ENSPFOG00000005750	-	96	88.699	ENSIPUG00000008367	-	99	87.708	Ictalurus_punctatus
ENSPFOG00000005750	-	100	93.456	ENSKMAG00000007213	-	100	93.456	Kryptolebias_marmoratus
ENSPFOG00000005750	-	100	89.718	ENSLBEG00000016890	-	100	90.323	Labrus_bergylta
ENSPFOG00000005750	-	96	88.085	ENSLBEG00000001740	ddx61	97	88.085	Labrus_bergylta
ENSPFOG00000005750	-	96	85.865	ENSLACG00000015214	ddx61	98	85.865	Latimeria_chalumnae
ENSPFOG00000005750	-	96	50.106	ENSLOCG00000004352	ddx61	95	50.844	Lepisosteus_oculatus
ENSPFOG00000005750	-	100	92.449	ENSMAMG00000005559	-	100	92.449	Mastacembelus_armatus
ENSPFOG00000005750	-	96	89.126	ENSMAMG00000005321	ddx61	96	89.126	Mastacembelus_armatus
ENSPFOG00000005750	-	100	92.886	ENSMZEG00005026268	-	100	92.886	Maylandia_zebra
ENSPFOG00000005750	-	98	87.083	ENSMZEG00005003556	ddx61	99	87.083	Maylandia_zebra
ENSPFOG00000005750	-	100	82.209	ENSMMOG00000013694	-	100	82.209	Mola_mola
ENSPFOG00000005750	-	73	76.487	ENSMMOG00000008825	-	92	76.487	Mola_mola
ENSPFOG00000005750	-	97	87.131	ENSMMOG00000007415	ddx61	98	87.131	Mola_mola
ENSPFOG00000005750	-	100	91.616	ENSMALG00000013817	-	100	91.616	Monopterus_albus
ENSPFOG00000005750	-	97	76.091	ENSMALG00000013776	ddx61	96	76.091	Monopterus_albus
ENSPFOG00000005750	-	98	80.208	ENSNBRG00000015800	ddx61	99	80.208	Neolamprologus_brichardi
ENSPFOG00000005750	-	100	86.382	ENSNBRG00000015075	-	100	86.382	Neolamprologus_brichardi
ENSPFOG00000005750	-	100	93.089	ENSONIG00000013748	-	100	93.089	Oreochromis_niloticus
ENSPFOG00000005750	-	98	87.083	ENSONIG00000011418	ddx61	99	87.083	Oreochromis_niloticus
ENSPFOG00000005750	-	100	91.393	ENSORLG00000009178	-	100	91.393	Oryzias_latipes
ENSPFOG00000005750	-	100	91.803	ENSORLG00020015515	-	100	91.803	Oryzias_latipes_hni
ENSPFOG00000005750	-	100	91.598	ENSORLG00015006764	-	100	91.598	Oryzias_latipes_hsok
ENSPFOG00000005750	-	98	83.403	ENSOMEG00000022326	-	99	83.403	Oryzias_melastigma
ENSPFOG00000005750	-	96	90.063	ENSPKIG00000024264	ddx61	98	89.004	Paramormyrops_kingsleyae
ENSPFOG00000005750	-	100	81.856	ENSPMGG00000013355	-	100	81.856	Periophthalmus_magnuspinnatus
ENSPFOG00000005750	-	100	100.000	ENSPLAG00000000403	-	100	100.000	Poecilia_latipinna
ENSPFOG00000005750	-	100	99.376	ENSPMEG00000023737	-	100	99.376	Poecilia_mexicana
ENSPFOG00000005750	-	98	80.851	ENSPNYG00000015045	ddx61	99	80.851	Pundamilia_nyererei
ENSPFOG00000005750	-	100	92.886	ENSPNYG00000003986	-	100	92.886	Pundamilia_nyererei
ENSPFOG00000005750	-	98	86.875	ENSPNAG00000024072	ddx61	99	86.875	Pygocentrus_nattereri
ENSPFOG00000005750	-	98	89.027	ENSPNAG00000008742	-	98	89.027	Pygocentrus_nattereri
ENSPFOG00000005750	-	96	89.831	ENSSFOG00015021404	ddx61	99	87.551	Scleropages_formosus
ENSPFOG00000005750	-	96	86.966	ENSSMAG00000006591	ddx61	97	86.105	Scophthalmus_maximus
ENSPFOG00000005750	-	100	90.798	ENSSMAG00000001793	-	100	90.798	Scophthalmus_maximus
ENSPFOG00000005750	-	100	92.449	ENSSDUG00000007530	-	100	92.449	Seriola_dumerili
ENSPFOG00000005750	-	96	88.889	ENSSDUG00000009713	ddx61	99	87.526	Seriola_dumerili
ENSPFOG00000005750	-	96	88.699	ENSSLDG00000000132	ddx61	99	87.344	Seriola_lalandi_dorsalis
ENSPFOG00000005750	-	100	92.449	ENSSLDG00000007608	-	100	92.449	Seriola_lalandi_dorsalis
ENSPFOG00000005750	-	100	93.661	ENSSPAG00000013878	-	100	93.661	Stegastes_partitus
ENSPFOG00000005750	-	96	88.248	ENSSPAG00000001578	ddx61	99	87.110	Stegastes_partitus
ENSPFOG00000005750	-	99	86.885	ENSTRUG00000012432	-	99	87.398	Takifugu_rubripes
ENSPFOG00000005750	-	98	89.353	ENSTNIG00000003560	-	100	89.353	Tetraodon_nigroviridis
ENSPFOG00000005750	-	100	89.441	ENSXCOG00000001406	-	100	89.441	Xiphophorus_couchianus
ENSPFOG00000005750	-	100	99.586	ENSXMAG00000016090	-	100	99.586	Xiphophorus_maculatus