EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000005754 (Gene tree)
Gene ID: 103151585
Gene Symbol: sf3b4
Alias: -
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 3263 bases
Position: chrKI519896.1:688458-691720
Accession: 103151585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000005679	RRM_1	PF00076.22	2.6e-39	1	2
ENSPFOP00000005679	RRM_1	PF00076.22	2.6e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000005688	-	1361	XM_007571736	ENSPFOP00000005679	394 (aa)	XP_007571798	A0A087XIS6

Gene Model

Click here to download ENSPFOG00000005754's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000005754's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000005754	sf3b4	65	37.569	ENSPFOG00000013241	pabpc1l	59	36.957
ENSPFOG00000005754	sf3b4	54	38.372	ENSPFOG00000022243	tia1l	78	34.518

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000005754	sf3b4	58	97.368	ENSG00000143368	SF3B4	100	95.263	Homo_sapiens
ENSPFOG00000005754	sf3b4	73	95.848	ENSAPOG00000017647	sf3b4	70	95.730	Acanthochromis_polyacanthus
ENSPFOG00000005754	sf3b4	58	97.368	ENSAMEG00000010073	SF3B4	64	90.476	Ailuropoda_melanoleuca
ENSPFOG00000005754	sf3b4	59	97.835	ENSACIG00000018455	sf3b4	70	97.468	Amphilophus_citrinellus
ENSPFOG00000005754	sf3b4	73	95.502	ENSAOCG00000019801	sf3b4	70	95.374	Amphiprion_ocellaris
ENSPFOG00000005754	sf3b4	73	95.502	ENSAPEG00000010365	sf3b4	70	95.374	Amphiprion_percula
ENSPFOG00000005754	sf3b4	62	99.177	ENSATEG00000012844	sf3b4	66	97.753	Anabas_testudineus
ENSPFOG00000005754	sf3b4	54	100.000	ENSACAG00000010019	SF3B4	65	91.481	Anolis_carolinensis
ENSPFOG00000005754	sf3b4	58	97.368	ENSANAG00000031025	SF3B4	56	95.359	Aotus_nancymaae
ENSPFOG00000005754	sf3b4	71	93.238	ENSACLG00000014260	sf3b4	70	93.238	Astatotilapia_calliptera
ENSPFOG00000005754	sf3b4	62	97.531	ENSAMXG00000008282	sf3b4	66	96.198	Astyanax_mexicanus
ENSPFOG00000005754	sf3b4	58	97.368	ENSBTAG00000012495	SF3B4	64	90.476	Bos_taurus
ENSPFOG00000005754	sf3b4	51	95.545	ENSBTAG00000012793	-	60	89.024	Bos_taurus
ENSPFOG00000005754	sf3b4	67	71.321	WBGene00004723	sap-49	55	81.690	Caenorhabditis_elegans
ENSPFOG00000005754	sf3b4	58	97.368	ENSCAFG00000011617	SF3B4	64	90.476	Canis_familiaris
ENSPFOG00000005754	sf3b4	58	97.368	ENSCAFG00020019775	SF3B4	64	90.476	Canis_lupus_dingo
ENSPFOG00000005754	sf3b4	58	97.368	ENSCHIG00000025663	-	64	90.476	Capra_hircus
ENSPFOG00000005754	sf3b4	74	61.462	ENSCHIG00000006654	-	50	74.627	Capra_hircus
ENSPFOG00000005754	sf3b4	58	97.368	ENSTSYG00000009295	SF3B4	56	95.359	Carlito_syrichta
ENSPFOG00000005754	sf3b4	59	93.548	ENSCAPG00000006451	SF3B4	51	94.475	Cavia_aperea
ENSPFOG00000005754	sf3b4	58	97.368	ENSCPOG00000008267	SF3B4	64	90.476	Cavia_porcellus
ENSPFOG00000005754	sf3b4	74	70.874	ENSCCAG00000019823	-	59	80.000	Cebus_capucinus
ENSPFOG00000005754	sf3b4	58	97.368	ENSCATG00000033114	SF3B4	56	95.359	Cercocebus_atys
ENSPFOG00000005754	sf3b4	58	97.368	ENSCLAG00000015851	SF3B4	64	90.476	Chinchilla_lanigera
ENSPFOG00000005754	sf3b4	58	97.368	ENSCSAG00000018129	SF3B4	56	95.359	Chlorocebus_sabaeus
ENSPFOG00000005754	sf3b4	54	100.000	ENSCPBG00000008041	SF3B4	65	89.706	Chrysemys_picta_bellii
ENSPFOG00000005754	sf3b4	57	88.393	ENSCING00000002337	-	57	90.610	Ciona_intestinalis
ENSPFOG00000005754	sf3b4	53	91.429	ENSCSAVG00000007809	-	89	89.820	Ciona_savignyi
ENSPFOG00000005754	sf3b4	58	97.368	ENSCANG00000035579	SF3B4	56	95.359	Colobus_angolensis_palliatus
ENSPFOG00000005754	sf3b4	58	97.368	ENSCGRG00001003590	Sf3b4	64	90.476	Cricetulus_griseus_chok1gshd
ENSPFOG00000005754	sf3b4	58	97.368	ENSCGRG00000016914	Sf3b4	64	90.476	Cricetulus_griseus_crigri
ENSPFOG00000005754	sf3b4	76	90.365	ENSCSEG00000015258	sf3b4	57	95.203	Cynoglossus_semilaevis
ENSPFOG00000005754	sf3b4	100	94.937	ENSCVAG00000005536	sf3b4	68	96.241	Cyprinodon_variegatus
ENSPFOG00000005754	sf3b4	62	97.531	ENSDARG00000018574	sf3b4	67	95.880	Danio_rerio
ENSPFOG00000005754	sf3b4	95	66.146	ENSDNOG00000037231	-	63	77.043	Dasypus_novemcinctus
ENSPFOG00000005754	sf3b4	56	91.818	ENSDNOG00000048908	-	63	85.660	Dasypus_novemcinctus
ENSPFOG00000005754	sf3b4	58	97.368	ENSDORG00000016366	Sf3b4	64	90.476	Dipodomys_ordii
ENSPFOG00000005754	sf3b4	76	68.667	FBgn0015818	Spx	61	88.263	Drosophila_melanogaster
ENSPFOG00000005754	sf3b4	58	87.281	ENSETEG00000008963	SF3B4	64	82.721	Echinops_telfairi
ENSPFOG00000005754	sf3b4	58	97.368	ENSEASG00005001477	SF3B4	64	90.476	Equus_asinus_asinus
ENSPFOG00000005754	sf3b4	58	97.368	ENSECAG00000024737	SF3B4	64	90.476	Equus_caballus
ENSPFOG00000005754	sf3b4	88	83.429	ENSELUG00000012876	sf3b4	66	95.506	Esox_lucius
ENSPFOG00000005754	sf3b4	58	97.368	ENSFCAG00000010106	SF3B4	64	90.476	Felis_catus
ENSPFOG00000005754	sf3b4	58	97.368	ENSFDAG00000009286	SF3B4	64	90.476	Fukomys_damarensis
ENSPFOG00000005754	sf3b4	58	98.253	ENSGMOG00000002519	sf3b4	70	95.781	Gadus_morhua
ENSPFOG00000005754	sf3b4	54	100.000	ENSGALG00000013352	SF3B4	65	92.222	Gallus_gallus
ENSPFOG00000005754	sf3b4	100	98.477	ENSGAFG00000010181	sf3b4	100	98.477	Gambusia_affinis
ENSPFOG00000005754	sf3b4	58	99.559	ENSGACG00000003819	sf3b4	66	95.038	Gasterosteus_aculeatus
ENSPFOG00000005754	sf3b4	54	100.000	ENSGAGG00000025055	SF3B4	57	89.706	Gopherus_agassizii
ENSPFOG00000005754	sf3b4	58	97.368	ENSGGOG00000004761	SF3B4	56	95.359	Gorilla_gorilla
ENSPFOG00000005754	sf3b4	91	63.228	ENSGGOG00000038845	-	54	89.151	Gorilla_gorilla
ENSPFOG00000005754	sf3b4	71	93.238	ENSHBUG00000002028	sf3b4	70	93.238	Haplochromis_burtoni
ENSPFOG00000005754	sf3b4	58	97.368	ENSHGLG00000012360	SF3B4	64	90.476	Heterocephalus_glaber_female
ENSPFOG00000005754	sf3b4	58	97.368	ENSHGLG00100008533	SF3B4	64	91.418	Heterocephalus_glaber_male
ENSPFOG00000005754	sf3b4	58	97.357	ENSHCOG00000003014	sf3b4	66	90.494	Hippocampus_comes
ENSPFOG00000005754	sf3b4	62	97.942	ENSIPUG00000012242	Sf3b4	67	95.506	Ictalurus_punctatus
ENSPFOG00000005754	sf3b4	58	97.368	ENSSTOG00000000684	-	64	90.476	Ictidomys_tridecemlineatus
ENSPFOG00000005754	sf3b4	96	57.692	ENSSTOG00000029627	-	60	70.342	Ictidomys_tridecemlineatus
ENSPFOG00000005754	sf3b4	57	70.370	ENSJJAG00000022500	Sf3b4	73	66.667	Jaculus_jaculus
ENSPFOG00000005754	sf3b4	96	88.127	ENSKMAG00000008154	sf3b4	68	97.026	Kryptolebias_marmoratus
ENSPFOG00000005754	sf3b4	59	97.854	ENSLBEG00000026818	sf3b4	67	94.382	Labrus_bergylta
ENSPFOG00000005754	sf3b4	61	94.167	ENSLACG00000004436	SF3B4	73	91.321	Latimeria_chalumnae
ENSPFOG00000005754	sf3b4	61	96.667	ENSLOCG00000009048	sf3b4	57	96.667	Lepisosteus_oculatus
ENSPFOG00000005754	sf3b4	58	97.368	ENSLAFG00000008531	SF3B4	64	90.476	Loxodonta_africana
ENSPFOG00000005754	sf3b4	89	60.000	ENSMFAG00000039067	-	60	77.232	Macaca_fascicularis
ENSPFOG00000005754	sf3b4	58	97.368	ENSMFAG00000042395	SF3B4	56	95.359	Macaca_fascicularis
ENSPFOG00000005754	sf3b4	58	97.368	ENSMMUG00000007256	SF3B4	56	95.359	Macaca_mulatta
ENSPFOG00000005754	sf3b4	58	97.368	ENSMNEG00000031839	SF3B4	56	95.359	Macaca_nemestrina
ENSPFOG00000005754	sf3b4	58	97.368	ENSMLEG00000038667	SF3B4	56	95.359	Mandrillus_leucophaeus
ENSPFOG00000005754	sf3b4	62	97.942	ENSMAMG00000014692	sf3b4	67	95.880	Mastacembelus_armatus
ENSPFOG00000005754	sf3b4	71	93.238	ENSMZEG00005026741	sf3b4	70	93.238	Maylandia_zebra
ENSPFOG00000005754	sf3b4	54	100.000	ENSMGAG00000000653	SF3B4	65	92.222	Meleagris_gallopavo
ENSPFOG00000005754	sf3b4	58	97.368	ENSMAUG00000015266	Sf3b4	64	90.476	Mesocricetus_auratus
ENSPFOG00000005754	sf3b4	58	97.368	ENSMICG00000044961	SF3B4	64	90.476	Microcebus_murinus
ENSPFOG00000005754	sf3b4	52	98.049	ENSMOCG00000014155	-	65	88.593	Microtus_ochrogaster
ENSPFOG00000005754	sf3b4	58	97.368	ENSMOCG00000013658	-	64	90.476	Microtus_ochrogaster
ENSPFOG00000005754	sf3b4	76	88.963	ENSMMOG00000018032	sf3b4	68	95.131	Mola_mola
ENSPFOG00000005754	sf3b4	58	97.368	ENSMODG00000018767	SF3B4	56	95.359	Monodelphis_domestica
ENSPFOG00000005754	sf3b4	68	96.255	ENSMALG00000006174	sf3b4	66	96.255	Monopterus_albus
ENSPFOG00000005754	sf3b4	58	97.368	MGP_CAROLIEiJ_G0025365	Sf3b4	64	90.110	Mus_caroli
ENSPFOG00000005754	sf3b4	58	97.368	ENSMUSG00000068856	Sf3b4	64	90.476	Mus_musculus
ENSPFOG00000005754	sf3b4	58	97.368	MGP_PahariEiJ_G0026809	Sf3b4	64	90.476	Mus_pahari
ENSPFOG00000005754	sf3b4	58	97.368	MGP_SPRETEiJ_G0026309	Sf3b4	64	90.476	Mus_spretus
ENSPFOG00000005754	sf3b4	58	97.368	ENSMPUG00000005563	SF3B4	64	90.476	Mustela_putorius_furo
ENSPFOG00000005754	sf3b4	58	97.368	ENSMLUG00000010789	SF3B4	64	90.842	Myotis_lucifugus
ENSPFOG00000005754	sf3b4	58	97.368	ENSNGAG00000016337	Sf3b4	64	90.476	Nannospalax_galili
ENSPFOG00000005754	sf3b4	71	93.238	ENSNBRG00000013865	sf3b4	70	93.238	Neolamprologus_brichardi
ENSPFOG00000005754	sf3b4	98	50.000	ENSNLEG00000009693	-	95	50.000	Nomascus_leucogenys
ENSPFOG00000005754	sf3b4	58	92.982	ENSOPRG00000010808	SF3B4	64	86.813	Ochotona_princeps
ENSPFOG00000005754	sf3b4	91	56.764	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSPFOG00000005754	sf3b4	77	69.401	ENSODEG00000003597	-	68	76.923	Octodon_degus
ENSPFOG00000005754	sf3b4	68	95.865	ENSONIG00000002730	sf3b4	66	95.865	Oreochromis_niloticus
ENSPFOG00000005754	sf3b4	66	71.269	ENSOANG00000004768	-	50	81.944	Ornithorhynchus_anatinus
ENSPFOG00000005754	sf3b4	58	97.368	ENSOCUG00000004614	SF3B4	64	90.476	Oryctolagus_cuniculus
ENSPFOG00000005754	sf3b4	76	89.369	ENSORLG00000003062	sf3b4	70	89.706	Oryzias_latipes
ENSPFOG00000005754	sf3b4	76	89.369	ENSORLG00020000687	sf3b4	68	89.706	Oryzias_latipes_hni
ENSPFOG00000005754	sf3b4	76	89.369	ENSORLG00015010989	sf3b4	68	89.706	Oryzias_latipes_hsok
ENSPFOG00000005754	sf3b4	59	96.983	ENSOMEG00000013694	sf3b4	68	94.815	Oryzias_melastigma
ENSPFOG00000005754	sf3b4	58	97.368	ENSOGAG00000006265	SF3B4	64	90.476	Otolemur_garnettii
ENSPFOG00000005754	sf3b4	58	97.368	ENSOARG00000020718	-	64	90.476	Ovis_aries
ENSPFOG00000005754	sf3b4	73	72.391	ENSOARG00000007368	-	57	78.970	Ovis_aries
ENSPFOG00000005754	sf3b4	78	71.875	ENSPPAG00000030024	-	58	85.232	Pan_paniscus
ENSPFOG00000005754	sf3b4	58	97.368	ENSPPAG00000040904	SF3B4	56	95.359	Pan_paniscus
ENSPFOG00000005754	sf3b4	58	97.368	ENSPPRG00000007384	SF3B4	64	90.476	Panthera_pardus
ENSPFOG00000005754	sf3b4	58	97.368	ENSPTIG00000014530	SF3B4	64	90.476	Panthera_tigris_altaica
ENSPFOG00000005754	sf3b4	78	74.351	ENSPTRG00000049727	-	59	85.654	Pan_troglodytes
ENSPFOG00000005754	sf3b4	58	97.368	ENSPTRG00000001243	SF3B4	56	95.359	Pan_troglodytes
ENSPFOG00000005754	sf3b4	58	97.368	ENSPANG00000005126	SF3B4	56	95.359	Papio_anubis
ENSPFOG00000005754	sf3b4	62	97.119	ENSPKIG00000020669	sf3b4	71	95.131	Paramormyrops_kingsleyae
ENSPFOG00000005754	sf3b4	58	97.368	ENSPEMG00000017568	Sf3b4	64	90.476	Peromyscus_maniculatus_bairdii
ENSPFOG00000005754	sf3b4	54	95.305	ENSPMAG00000007842	-	55	90.717	Petromyzon_marinus
ENSPFOG00000005754	sf3b4	58	97.368	ENSPCIG00000008765	SF3B4	56	95.359	Phascolarctos_cinereus
ENSPFOG00000005754	sf3b4	87	100.000	ENSPLAG00000001401	sf3b4	94	100.000	Poecilia_latipinna
ENSPFOG00000005754	sf3b4	100	99.492	ENSPMEG00000014452	sf3b4	57	99.492	Poecilia_mexicana
ENSPFOG00000005754	sf3b4	87	95.480	ENSPREG00000011076	sf3b4	88	95.480	Poecilia_reticulata
ENSPFOG00000005754	sf3b4	53	96.635	ENSPCAG00000000392	SF3B4	50	96.635	Procavia_capensis
ENSPFOG00000005754	sf3b4	58	97.368	ENSPCOG00000015399	SF3B4	64	90.476	Propithecus_coquereli
ENSPFOG00000005754	sf3b4	58	97.368	ENSPVAG00000014171	SF3B4	64	90.476	Pteropus_vampyrus
ENSPFOG00000005754	sf3b4	71	93.238	ENSPNYG00000012700	sf3b4	70	93.238	Pundamilia_nyererei
ENSPFOG00000005754	sf3b4	62	97.531	ENSPNAG00000000686	sf3b4	68	95.506	Pygocentrus_nattereri
ENSPFOG00000005754	sf3b4	58	97.368	ENSRNOG00000021181	Sf3b4	64	90.476	Rattus_norvegicus
ENSPFOG00000005754	sf3b4	78	80.564	ENSRBIG00000043392	SF3B4	56	95.359	Rhinopithecus_bieti
ENSPFOG00000005754	sf3b4	58	97.368	ENSRROG00000029366	SF3B4	56	95.359	Rhinopithecus_roxellana
ENSPFOG00000005754	sf3b4	93	60.582	ENSRROG00000028213	-	58	72.489	Rhinopithecus_roxellana
ENSPFOG00000005754	sf3b4	78	64.263	ENSSBOG00000025174	-	51	73.840	Saimiri_boliviensis_boliviensis
ENSPFOG00000005754	sf3b4	58	96.930	ENSSBOG00000012310	-	56	94.937	Saimiri_boliviensis_boliviensis
ENSPFOG00000005754	sf3b4	58	92.544	ENSSHAG00000004043	SF3B4	55	90.717	Sarcophilus_harrisii
ENSPFOG00000005754	sf3b4	62	97.119	ENSSFOG00015008864	sf3b4	66	95.131	Scleropages_formosus
ENSPFOG00000005754	sf3b4	76	93.624	ENSSMAG00000006837	sf3b4	67	96.642	Scophthalmus_maximus
ENSPFOG00000005754	sf3b4	68	96.617	ENSSDUG00000012064	sf3b4	66	96.629	Seriola_dumerili
ENSPFOG00000005754	sf3b4	68	96.617	ENSSLDG00000014226	sf3b4	66	96.629	Seriola_lalandi_dorsalis
ENSPFOG00000005754	sf3b4	62	93.902	ENSSPUG00000001028	SF3B4	59	95.763	Sphenodon_punctatus
ENSPFOG00000005754	sf3b4	62	97.531	ENSSPAG00000019219	sf3b4	66	96.255	Stegastes_partitus
ENSPFOG00000005754	sf3b4	78	79.012	ENSSSCG00000006665	-	64	90.476	Sus_scrofa
ENSPFOG00000005754	sf3b4	80	55.108	ENSSSCG00000039440	-	58	62.025	Sus_scrofa
ENSPFOG00000005754	sf3b4	61	94.215	ENSTGUG00000004470	SF3B4	93	95.359	Taeniopygia_guttata
ENSPFOG00000005754	sf3b4	81	90.566	ENSTRUG00000004516	sf3b4	67	95.131	Takifugu_rubripes
ENSPFOG00000005754	sf3b4	68	92.857	ENSTNIG00000009156	sf3b4	68	90.406	Tetraodon_nigroviridis
ENSPFOG00000005754	sf3b4	58	97.368	ENSTTRG00000005217	SF3B4	64	90.476	Tursiops_truncatus
ENSPFOG00000005754	sf3b4	58	97.368	ENSUAMG00000022468	SF3B4	64	90.476	Ursus_americanus
ENSPFOG00000005754	sf3b4	58	97.368	ENSUMAG00000003802	SF3B4	64	90.476	Ursus_maritimus
ENSPFOG00000005754	sf3b4	55	97.222	ENSVPAG00000008152	SF3B4	63	90.038	Vicugna_pacos
ENSPFOG00000005754	sf3b4	58	97.368	ENSVVUG00000007732	-	70	91.176	Vulpes_vulpes
ENSPFOG00000005754	sf3b4	57	94.170	ENSVVUG00000022697	-	56	88.390	Vulpes_vulpes
ENSPFOG00000005754	sf3b4	77	77.961	ENSXETG00000011038	sf3b4	58	94.118	Xenopus_tropicalis
ENSPFOG00000005754	sf3b4	100	97.970	ENSXCOG00000019895	sf3b4	100	97.970	Xiphophorus_couchianus
ENSPFOG00000005754	sf3b4	100	98.223	ENSXMAG00000003772	sf3b4	100	98.223	Xiphophorus_maculatus