EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000005836 (Gene tree)
Gene ID: 103129820
Gene Symbol: larp1
Alias: -
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 43044 bases
Position: chrKI520191.1:209804-252847
Accession: 103129820
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000005922	La	PF05383.17	4.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000005931	-	7079	-	ENSPFOP00000005922	1094 (aa)	XP_007541083	A0A087XJG9

Gene Model

Click here to download ENSPFOG00000005836's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000005836's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000005836	larp1	64	40.664	ENSPFOG00000022837	-	87	43.987
ENSPFOG00000005836	larp1	100	49.256	ENSPFOG00000019519	larp1b	91	52.294

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000005836	larp1	85	67.712	ENSG00000155506	LARP1	90	81.212	Homo_sapiens
ENSPFOG00000005836	larp1	90	94.118	ENSAPOG00000020685	larp1	98	96.226	Acanthochromis_polyacanthus
ENSPFOG00000005836	larp1	85	67.739	ENSAMEG00000016673	LARP1	96	67.883	Ailuropoda_melanoleuca
ENSPFOG00000005836	larp1	100	74.081	ENSACIG00000012994	larp1	100	73.274	Amphilophus_citrinellus
ENSPFOG00000005836	larp1	77	86.550	ENSAOCG00000007792	larp1	100	86.433	Amphiprion_ocellaris
ENSPFOG00000005836	larp1	100	85.027	ENSAPEG00000022246	larp1	100	84.755	Amphiprion_percula
ENSPFOG00000005836	larp1	97	83.038	ENSATEG00000013523	larp1	100	82.901	Anabas_testudineus
ENSPFOG00000005836	larp1	82	70.334	ENSAPLG00000007559	LARP1	99	70.172	Anas_platyrhynchos
ENSPFOG00000005836	larp1	88	67.333	ENSACAG00000004071	LARP1	97	69.613	Anolis_carolinensis
ENSPFOG00000005836	larp1	85	67.779	ENSANAG00000029949	LARP1	96	65.068	Aotus_nancymaae
ENSPFOG00000005836	larp1	100	83.318	ENSACLG00000015256	larp1	99	85.976	Astatotilapia_calliptera
ENSPFOG00000005836	larp1	97	73.394	ENSAMXG00000000859	larp1	98	73.946	Astyanax_mexicanus
ENSPFOG00000005836	larp1	96	63.219	ENSBTAG00000008443	LARP1	97	62.983	Bos_taurus
ENSPFOG00000005836	larp1	96	62.545	ENSCJAG00000004454	LARP1	97	62.321	Callithrix_jacchus
ENSPFOG00000005836	larp1	85	68.017	ENSCAFG00000017639	LARP1	97	67.850	Canis_familiaris
ENSPFOG00000005836	larp1	77	70.938	ENSCAFG00020023860	LARP1	95	70.771	Canis_lupus_dingo
ENSPFOG00000005836	larp1	96	63.470	ENSCHIG00000014414	LARP1	97	62.135	Capra_hircus
ENSPFOG00000005836	larp1	87	67.748	ENSTSYG00000013732	LARP1	96	65.421	Carlito_syrichta
ENSPFOG00000005836	larp1	74	70.072	ENSCAPG00000013865	LARP1	83	67.668	Cavia_aperea
ENSPFOG00000005836	larp1	85	68.509	ENSCPOG00000003377	LARP1	96	68.344	Cavia_porcellus
ENSPFOG00000005836	larp1	96	62.186	ENSCCAG00000025201	LARP1	97	63.030	Cebus_capucinus
ENSPFOG00000005836	larp1	96	60.721	ENSCATG00000030675	LARP1	97	61.046	Cercocebus_atys
ENSPFOG00000005836	larp1	88	66.700	ENSCLAG00000012755	LARP1	95	67.495	Chinchilla_lanigera
ENSPFOG00000005836	larp1	77	67.977	ENSCSAG00000010800	LARP1	95	67.861	Chlorocebus_sabaeus
ENSPFOG00000005836	larp1	83	65.447	ENSCHOG00000012716	LARP1	88	65.288	Choloepus_hoffmanni
ENSPFOG00000005836	larp1	91	69.505	ENSCPBG00000002173	LARP1	90	71.429	Chrysemys_picta_bellii
ENSPFOG00000005836	larp1	84	68.416	ENSCANG00000037418	LARP1	90	67.786	Colobus_angolensis_palliatus
ENSPFOG00000005836	larp1	98	63.693	ENSCGRG00001016913	Larp1	97	64.513	Cricetulus_griseus_chok1gshd
ENSPFOG00000005836	larp1	84	65.011	ENSCGRG00000009916	Larp1	99	65.011	Cricetulus_griseus_crigri
ENSPFOG00000005836	larp1	100	82.475	ENSCSEG00000016431	larp1	100	82.597	Cynoglossus_semilaevis
ENSPFOG00000005836	larp1	99	87.879	ENSCVAG00000022687	larp1	100	88.778	Cyprinodon_variegatus
ENSPFOG00000005836	larp1	92	71.076	ENSDARG00000101722	larp1	93	72.393	Danio_rerio
ENSPFOG00000005836	larp1	99	61.713	ENSDNOG00000012073	LARP1	97	62.646	Dasypus_novemcinctus
ENSPFOG00000005836	larp1	87	63.110	ENSDORG00000002897	Larp1	95	65.550	Dipodomys_ordii
ENSPFOG00000005836	larp1	81	68.668	ENSETEG00000020251	LARP1	100	66.558	Echinops_telfairi
ENSPFOG00000005836	larp1	96	62.759	ENSEASG00005001070	LARP1	97	62.983	Equus_asinus_asinus
ENSPFOG00000005836	larp1	96	62.759	ENSECAG00000017002	LARP1	78	63.333	Equus_caballus
ENSPFOG00000005836	larp1	83	65.236	ENSEEUG00000001065	LARP1	96	65.236	Erinaceus_europaeus
ENSPFOG00000005836	larp1	99	74.127	ENSELUG00000019403	larp1	98	75.945	Esox_lucius
ENSPFOG00000005836	larp1	96	62.478	ENSFCAG00000000592	LARP1	97	62.757	Felis_catus
ENSPFOG00000005836	larp1	76	72.038	ENSFALG00000008335	LARP1	95	72.311	Ficedula_albicollis
ENSPFOG00000005836	larp1	84	68.625	ENSFDAG00000021125	LARP1	96	68.206	Fukomys_damarensis
ENSPFOG00000005836	larp1	64	77.966	ENSFHEG00000020307	larp1	97	78.955	Fundulus_heteroclitus
ENSPFOG00000005836	larp1	99	65.162	ENSGALG00000040109	LARP1	97	66.451	Gallus_gallus
ENSPFOG00000005836	larp1	99	66.012	ENSGAGG00000025113	LARP1	93	73.933	Gopherus_agassizii
ENSPFOG00000005836	larp1	87	66.940	ENSGGOG00000006048	LARP1	91	66.976	Gorilla_gorilla
ENSPFOG00000005836	larp1	100	83.871	ENSHBUG00000020762	larp1	99	86.517	Haplochromis_burtoni
ENSPFOG00000005836	larp1	99	62.356	ENSHGLG00000006267	LARP1	97	63.148	Heterocephalus_glaber_female
ENSPFOG00000005836	larp1	88	57.259	ENSHGLG00100003395	-	88	55.816	Heterocephalus_glaber_male
ENSPFOG00000005836	larp1	87	66.870	ENSHGLG00100014230	-	96	67.820	Heterocephalus_glaber_male
ENSPFOG00000005836	larp1	87	92.982	ENSHCOG00000010786	larp1	96	94.373	Hippocampus_comes
ENSPFOG00000005836	larp1	89	72.979	ENSIPUG00000019105	Larp1	95	73.797	Ictalurus_punctatus
ENSPFOG00000005836	larp1	84	66.212	ENSSTOG00000005678	LARP1	95	65.792	Ictidomys_tridecemlineatus
ENSPFOG00000005836	larp1	96	60.148	ENSJJAG00000016950	Larp1	97	60.074	Jaculus_jaculus
ENSPFOG00000005836	larp1	100	85.209	ENSKMAG00000018468	larp1	99	88.012	Kryptolebias_marmoratus
ENSPFOG00000005836	larp1	99	81.017	ENSLBEG00000027172	larp1	100	80.501	Labrus_bergylta
ENSPFOG00000005836	larp1	93	74.441	ENSLOCG00000012457	larp1	99	74.441	Lepisosteus_oculatus
ENSPFOG00000005836	larp1	98	61.939	ENSLAFG00000008991	LARP1	97	62.888	Loxodonta_africana
ENSPFOG00000005836	larp1	84	67.996	ENSMFAG00000031651	LARP1	90	67.681	Macaca_fascicularis
ENSPFOG00000005836	larp1	84	65.368	ENSMMUG00000009411	LARP1	96	65.263	Macaca_mulatta
ENSPFOG00000005836	larp1	77	70.670	ENSMNEG00000039294	LARP1	95	70.323	Macaca_nemestrina
ENSPFOG00000005836	larp1	84	68.101	ENSMLEG00000035142	LARP1	90	67.786	Mandrillus_leucophaeus
ENSPFOG00000005836	larp1	100	82.491	ENSMAMG00000021788	larp1	100	82.671	Mastacembelus_armatus
ENSPFOG00000005836	larp1	100	83.318	ENSMZEG00005009345	larp1	99	85.976	Maylandia_zebra
ENSPFOG00000005836	larp1	88	69.089	ENSMGAG00000005696	LARP1	96	68.526	Meleagris_gallopavo
ENSPFOG00000005836	larp1	99	63.009	ENSMAUG00000001385	Larp1	97	64.240	Mesocricetus_auratus
ENSPFOG00000005836	larp1	85	67.430	ENSMICG00000000837	LARP1	95	70.468	Microcebus_murinus
ENSPFOG00000005836	larp1	98	63.857	ENSMOCG00000008920	Larp1	97	64.240	Microtus_ochrogaster
ENSPFOG00000005836	larp1	94	60.914	ENSMMOG00000013364	larp1	99	62.407	Mola_mola
ENSPFOG00000005836	larp1	88	67.308	ENSMODG00000008663	LARP1	96	68.295	Monodelphis_domestica
ENSPFOG00000005836	larp1	100	84.273	ENSMALG00000017180	larp1	100	83.818	Monopterus_albus
ENSPFOG00000005836	larp1	98	64.195	MGP_CAROLIEiJ_G0016383	Larp1	97	64.513	Mus_caroli
ENSPFOG00000005836	larp1	98	64.286	ENSMUSG00000037331	Larp1	97	64.604	Mus_musculus
ENSPFOG00000005836	larp1	98	64.137	MGP_PahariEiJ_G0017518	Larp1	97	64.273	Mus_pahari
ENSPFOG00000005836	larp1	98	64.286	MGP_SPRETEiJ_G0017225	Larp1	97	64.604	Mus_spretus
ENSPFOG00000005836	larp1	82	60.042	ENSMPUG00000013564	LARP1	99	59.621	Mustela_putorius_furo
ENSPFOG00000005836	larp1	87	63.821	ENSMLUG00000002608	LARP1	97	64.657	Myotis_lucifugus
ENSPFOG00000005836	larp1	87	65.088	ENSNGAG00000001098	Larp1	95	65.618	Nannospalax_galili
ENSPFOG00000005836	larp1	90	83.483	ENSNBRG00000008963	larp1	98	83.684	Neolamprologus_brichardi
ENSPFOG00000005836	larp1	85	66.632	ENSNLEG00000016588	LARP1	96	65.598	Nomascus_leucogenys
ENSPFOG00000005836	larp1	87	63.495	ENSMEUG00000002957	LARP1	96	64.059	Notamacropus_eugenii
ENSPFOG00000005836	larp1	85	68.300	ENSOPRG00000013014	LARP1	96	68.239	Ochotona_princeps
ENSPFOG00000005836	larp1	85	67.987	ENSODEG00000010824	LARP1	96	67.925	Octodon_degus
ENSPFOG00000005836	larp1	99	80.610	ENSONIG00000017308	larp1	97	82.597	Oreochromis_niloticus
ENSPFOG00000005836	larp1	89	68.236	ENSOANG00000005096	LARP1	95	70.755	Ornithorhynchus_anatinus
ENSPFOG00000005836	larp1	99	62.811	ENSOCUG00000013066	LARP1	97	63.836	Oryctolagus_cuniculus
ENSPFOG00000005836	larp1	100	81.176	ENSORLG00000000824	larp1	100	81.267	Oryzias_latipes
ENSPFOG00000005836	larp1	100	81.505	ENSORLG00020022241	larp1	100	81.505	Oryzias_latipes_hni
ENSPFOG00000005836	larp1	100	80.291	ENSORLG00015007538	larp1	100	81.562	Oryzias_latipes_hsok
ENSPFOG00000005836	larp1	100	80.581	ENSOMEG00000003134	larp1	100	81.596	Oryzias_melastigma
ENSPFOG00000005836	larp1	87	67.005	ENSOGAG00000016750	LARP1	96	67.809	Otolemur_garnettii
ENSPFOG00000005836	larp1	85	66.806	ENSOARG00000009893	LARP1	97	66.423	Ovis_aries
ENSPFOG00000005836	larp1	85	67.712	ENSPPAG00000042993	LARP1	90	67.752	Pan_paniscus
ENSPFOG00000005836	larp1	85	66.736	ENSPPRG00000009780	LARP1	91	66.006	Panthera_pardus
ENSPFOG00000005836	larp1	85	66.944	ENSPTIG00000007013	LARP1	91	66.528	Panthera_tigris_altaica
ENSPFOG00000005836	larp1	96	60.198	ENSPTRG00000017447	LARP1	97	61.167	Pan_troglodytes
ENSPFOG00000005836	larp1	96	60.721	ENSPANG00000008080	LARP1	97	61.046	Papio_anubis
ENSPFOG00000005836	larp1	97	65.434	ENSPKIG00000017153	-	99	65.802	Paramormyrops_kingsleyae
ENSPFOG00000005836	larp1	100	73.153	ENSPKIG00000010096	larp1	96	74.464	Paramormyrops_kingsleyae
ENSPFOG00000005836	larp1	94	75.895	ENSPMGG00000011599	larp1	97	76.573	Periophthalmus_magnuspinnatus
ENSPFOG00000005836	larp1	87	65.693	ENSPEMG00000022523	Larp1	96	65.864	Peromyscus_maniculatus_bairdii
ENSPFOG00000005836	larp1	97	64.247	ENSPCIG00000019242	LARP1	89	64.351	Phascolarctos_cinereus
ENSPFOG00000005836	larp1	100	99.726	ENSPLAG00000008936	larp1	100	99.726	Poecilia_latipinna
ENSPFOG00000005836	larp1	100	99.269	ENSPMEG00000013656	larp1	100	99.269	Poecilia_mexicana
ENSPFOG00000005836	larp1	89	97.835	ENSPREG00000005726	larp1	99	97.835	Poecilia_reticulata
ENSPFOG00000005836	larp1	85	65.938	ENSPCAG00000006407	LARP1	97	65.969	Procavia_capensis
ENSPFOG00000005836	larp1	85	61.105	ENSPCOG00000016949	LARP1	96	63.240	Propithecus_coquereli
ENSPFOG00000005836	larp1	96	62.923	ENSPVAG00000002262	LARP1	97	63.571	Pteropus_vampyrus
ENSPFOG00000005836	larp1	100	83.229	ENSPNYG00000007938	larp1	99	86.077	Pundamilia_nyererei
ENSPFOG00000005836	larp1	98	72.181	ENSPNAG00000021427	larp1	97	74.057	Pygocentrus_nattereri
ENSPFOG00000005836	larp1	87	64.826	ENSRNOG00000031544	Larp1	95	65.690	Rattus_norvegicus
ENSPFOG00000005836	larp1	84	68.101	ENSRBIG00000038005	LARP1	90	67.786	Rhinopithecus_bieti
ENSPFOG00000005836	larp1	85	67.779	ENSRROG00000034073	LARP1	95	70.439	Rhinopithecus_roxellana
ENSPFOG00000005836	larp1	88	66.165	ENSSBOG00000019816	LARP1	96	65.199	Saimiri_boliviensis_boliviensis
ENSPFOG00000005836	larp1	87	68.443	ENSSHAG00000011115	LARP1	96	69.579	Sarcophilus_harrisii
ENSPFOG00000005836	larp1	88	74.346	ENSSFOG00015020304	larp1	95	75.637	Scleropages_formosus
ENSPFOG00000005836	larp1	97	71.535	ENSSFOG00015018058	-	96	71.671	Scleropages_formosus
ENSPFOG00000005836	larp1	93	79.556	ENSSMAG00000007468	larp1	98	81.220	Scophthalmus_maximus
ENSPFOG00000005836	larp1	100	84.512	ENSSDUG00000000268	larp1	100	84.602	Seriola_dumerili
ENSPFOG00000005836	larp1	81	82.063	ENSSLDG00000016505	larp1	99	80.692	Seriola_lalandi_dorsalis
ENSPFOG00000005836	larp1	53	83.534	ENSSARG00000013907	-	83	83.600	Sorex_araneus
ENSPFOG00000005836	larp1	99	63.739	ENSSPUG00000012179	-	99	64.136	Sphenodon_punctatus
ENSPFOG00000005836	larp1	100	83.779	ENSSPAG00000003910	larp1	100	84.300	Stegastes_partitus
ENSPFOG00000005836	larp1	96	62.266	ENSSSCG00000017069	LARP1	96	69.738	Sus_scrofa
ENSPFOG00000005836	larp1	84	69.831	ENSTGUG00000000704	LARP1	100	69.620	Taeniopygia_guttata
ENSPFOG00000005836	larp1	99	80.234	ENSTRUG00000009470	larp1	99	80.323	Takifugu_rubripes
ENSPFOG00000005836	larp1	82	67.538	ENSTBEG00000003381	LARP1	99	66.993	Tupaia_belangeri
ENSPFOG00000005836	larp1	87	66.193	ENSTTRG00000015934	LARP1	97	67.672	Tursiops_truncatus
ENSPFOG00000005836	larp1	96	62.299	ENSUAMG00000019334	LARP1	97	62.400	Ursus_americanus
ENSPFOG00000005836	larp1	85	66.040	ENSUMAG00000002934	LARP1	96	67.774	Ursus_maritimus
ENSPFOG00000005836	larp1	77	70.938	ENSVVUG00000004644	LARP1	95	70.771	Vulpes_vulpes
ENSPFOG00000005836	larp1	96	67.105	ENSXETG00000008413	larp1	99	65.517	Xenopus_tropicalis
ENSPFOG00000005836	larp1	86	93.245	ENSXCOG00000004022	larp1	99	93.245	Xiphophorus_couchianus
ENSPFOG00000005836	larp1	100	97.715	ENSXMAG00000018780	larp1	100	97.715	Xiphophorus_maculatus