EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSPFOG00000005901 (Gene tree)
Gene ID: 103155714
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-5C-like
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 6674 bases
Position: chrKI520054.1:158371-165044
Accession: 103155714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000005823	MMR_HSR1	PF01926.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000005832	-	2061	XM_007577493	ENSPFOP00000005823	223 (aa)	XP_007577555	A0A087XJ70

Gene Model

Click here to download ENSPFOG00000005901's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000005901's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000005901	-	74	41.765	ENSPFOG00000003934	-	82	41.765
ENSPFOG00000005901	-	75	38.095	ENSPFOG00000001579	rab12	69	39.286
ENSPFOG00000005901	-	74	36.145	ENSPFOG00000004492	RAB39B	77	36.585
ENSPFOG00000005901	-	78	43.407	ENSPFOG00000007571	rab18a	87	44.134
ENSPFOG00000005901	-	67	38.065	ENSPFOG00000024704	rab9a	77	38.065
ENSPFOG00000005901	-	88	44.670	ENSPFOG00000000498	-	88	44.809
ENSPFOG00000005901	-	75	40.719	ENSPFOG00000006655	rab35b	85	40.698
ENSPFOG00000005901	-	70	32.919	ENSPFOG00000008547	rab34a	52	32.919
ENSPFOG00000005901	-	100	90.135	ENSPFOG00000023458	rab5c	96	91.549
ENSPFOG00000005901	-	88	40.686	ENSPFOG00000009284	rab11a	76	46.626
ENSPFOG00000005901	-	84	38.503	ENSPFOG00000019821	RAB14	86	38.503
ENSPFOG00000005901	-	92	39.806	ENSPFOG00000003742	rab6ba	92	41.361
ENSPFOG00000005901	-	73	37.195	ENSPFOG00000004838	rab42a	62	37.195
ENSPFOG00000005901	-	73	46.626	ENSPFOG00000006224	-	75	46.626
ENSPFOG00000005901	-	76	45.402	ENSPFOG00000011310	rab25b	83	45.402
ENSPFOG00000005901	-	72	43.478	ENSPFOG00000014630	rab4a	76	43.478
ENSPFOG00000005901	-	99	83.182	ENSPFOG00000011263	rab5aa	95	87.440
ENSPFOG00000005901	-	69	31.169	ENSPFOG00000004921	rheb	84	31.818
ENSPFOG00000005901	-	90	40.594	ENSPFOG00000019509	rab6a	80	44.910
ENSPFOG00000005901	-	78	34.078	ENSPFOG00000022360	-	63	36.424
ENSPFOG00000005901	-	77	41.954	ENSPFOG00000014418	-	87	41.954
ENSPFOG00000005901	-	54	30.645	ENSPFOG00000003916	arl8bb	63	30.645
ENSPFOG00000005901	-	82	41.489	ENSPFOG00000006314	-	77	41.489
ENSPFOG00000005901	-	72	30.435	ENSPFOG00000008890	rras	72	30.435
ENSPFOG00000005901	-	70	31.875	ENSPFOG00000011444	rab34b	63	31.875
ENSPFOG00000005901	-	71	33.742	ENSPFOG00000015409	si:dkey-13a21.4	79	33.742
ENSPFOG00000005901	-	74	36.145	ENSPFOG00000004684	-	77	36.585
ENSPFOG00000005901	-	72	33.125	ENSPFOG00000011493	rab23	68	35.625
ENSPFOG00000005901	-	77	43.605	ENSPFOG00000011424	RAB41	82	43.605
ENSPFOG00000005901	-	89	39.899	ENSPFOG00000001167	-	92	39.899
ENSPFOG00000005901	-	72	54.375	ENSPFOG00000013027	rab22a	98	54.375
ENSPFOG00000005901	-	74	38.182	ENSPFOG00000013182	RAB15	79	38.182
ENSPFOG00000005901	-	88	34.146	ENSPFOG00000020060	rab9b	91	34.555
ENSPFOG00000005901	-	72	38.554	ENSPFOG00000004037	rab33a	59	38.554
ENSPFOG00000005901	-	53	30.328	ENSPFOG00000012465	arl8a	61	30.328
ENSPFOG00000005901	-	75	45.238	ENSPFOG00000005479	rab30	83	45.238
ENSPFOG00000005901	-	88	38.350	ENSPFOG00000004786	rab2a	79	41.667
ENSPFOG00000005901	-	88	40.196	ENSPFOG00000024114	-	75	46.626
ENSPFOG00000005901	-	70	38.710	ENSPFOG00000017960	rabl2	69	38.710
ENSPFOG00000005901	-	89	42.233	ENSPFOG00000013491	rab18b	88	44.505
ENSPFOG00000005901	-	88	42.079	ENSPFOG00000011316	rab11al	73	48.408
ENSPFOG00000005901	-	72	47.205	ENSPFOG00000006159	rab11ba	74	47.205
ENSPFOG00000005901	-	83	50.000	ENSPFOG00000012977	rab22a	95	50.000
ENSPFOG00000005901	-	82	41.489	ENSPFOG00000019144	-	77	41.489
ENSPFOG00000005901	-	74	38.012	ENSPFOG00000009101	-	73	38.012
ENSPFOG00000005901	-	78	35.714	ENSPFOG00000022477	-	81	35.714
ENSPFOG00000005901	-	73	31.902	ENSPFOG00000015499	kras	85	31.902
ENSPFOG00000005901	-	100	90.135	ENSPFOG00000012082	rab5c	96	91.549
ENSPFOG00000005901	-	73	36.145	ENSPFOG00000014499	si:dkey-34d22.5	75	36.145
ENSPFOG00000005901	-	78	31.844	ENSPFOG00000002595	hrasb	94	31.844
ENSPFOG00000005901	-	78	43.678	ENSPFOG00000013810	zgc:171927	80	43.678
ENSPFOG00000005901	-	72	39.752	ENSPFOG00000017775	rab15	76	39.752
ENSPFOG00000005901	-	74	41.765	ENSPFOG00000003465	RAB7A	82	41.765
ENSPFOG00000005901	-	88	43.655	ENSPFOG00000001829	rab1ab	86	45.402
ENSPFOG00000005901	-	88	43.655	ENSPFOG00000012594	rab1ba	88	42.408
ENSPFOG00000005901	-	88	37.313	ENSPFOG00000004746	si:dkey-16l2.16	76	41.509
ENSPFOG00000005901	-	78	38.660	ENSPFOG00000000349	rab33ba	79	38.220
ENSPFOG00000005901	-	65	33.562	ENSPFOG00000008678	si:cabz01085950.1	72	33.562
ENSPFOG00000005901	-	91	42.512	ENSPFOG00000010632	rab25a	82	46.629