EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000005998 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 5856 bases
Position: chrKI519908.1:574576-580431
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000005876	zf-C2H2	PF00096.26	3.3e-17	1	4
ENSPFOP00000005876	zf-C2H2	PF00096.26	3.3e-17	2	4
ENSPFOP00000005876	zf-C2H2	PF00096.26	3.3e-17	3	4
ENSPFOP00000005876	zf-C2H2	PF00096.26	3.3e-17	4	4
ENSPFOP00000021916	zf-C2H2	PF00096.26	5.1e-16	1	4
ENSPFOP00000021916	zf-C2H2	PF00096.26	5.1e-16	2	4
ENSPFOP00000021916	zf-C2H2	PF00096.26	5.1e-16	3	4
ENSPFOP00000021916	zf-C2H2	PF00096.26	5.1e-16	4	4
ENSPFOP00000005876	zf-met	PF12874.7	1.5e-07	1	2
ENSPFOP00000005876	zf-met	PF12874.7	1.5e-07	2	2
ENSPFOP00000021916	zf-met	PF12874.7	6e-07	1	2
ENSPFOP00000021916	zf-met	PF12874.7	6e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000005885	-	951	-	ENSPFOP00000005876	317 (aa)	-	A0A087XJC3
ENSPFOT00000022921	-	4082	-	ENSPFOP00000021916	313 (aa)	-	A0A096LRX5

Gene Model

Click here to download ENSPFOG00000005998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000005998's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000005998	-	54	41.304	ENSPFOG00000015002	-	72	45.794
ENSPFOG00000005998	-	75	39.669	ENSPFOG00000018237	-	100	47.706
ENSPFOG00000005998	-	75	37.255	ENSPFOG00000020109	-	89	45.299
ENSPFOG00000005998	-	82	37.952	ENSPFOG00000004894	-	72	45.872
ENSPFOG00000005998	-	53	37.419	ENSPFOG00000018462	-	74	42.609
ENSPFOG00000005998	-	51	40.351	ENSPFOG00000011766	-	98	42.708
ENSPFOG00000005998	-	63	55.556	ENSPFOG00000023483	-	100	55.556
ENSPFOG00000005998	-	76	44.231	ENSPFOG00000007728	-	59	42.056
ENSPFOG00000005998	-	61	39.759	ENSPFOG00000001760	-	71	46.087
ENSPFOG00000005998	-	66	36.735	ENSPFOG00000021800	-	72	44.954
ENSPFOG00000005998	-	55	42.754	ENSPFOG00000001339	-	93	48.598
ENSPFOG00000005998	-	72	35.762	ENSPFOG00000024512	-	65	36.842
ENSPFOG00000005998	-	51	39.552	ENSPFOG00000003460	gfi1b	54	39.552
ENSPFOG00000005998	-	72	46.789	ENSPFOG00000022026	-	67	46.789
ENSPFOG00000005998	-	50	43.165	ENSPFOG00000024469	-	80	43.165
ENSPFOG00000005998	-	52	35.915	ENSPFOG00000002887	-	78	42.609
ENSPFOG00000005998	-	63	39.726	ENSPFOG00000018245	-	100	44.330
ENSPFOG00000005998	-	58	41.259	ENSPFOG00000024748	-	63	41.259
ENSPFOG00000005998	-	84	40.667	ENSPFOG00000001053	-	100	47.222
ENSPFOG00000005998	-	56	40.541	ENSPFOG00000022913	-	66	52.632
ENSPFOG00000005998	-	60	37.143	ENSPFOG00000023510	-	67	46.296
ENSPFOG00000005998	-	63	42.742	ENSPFOG00000018784	-	63	47.222
ENSPFOG00000005998	-	51	38.415	ENSPFOG00000022634	-	67	44.860
ENSPFOG00000005998	-	55	41.667	ENSPFOG00000023476	-	69	39.310
ENSPFOG00000005998	-	61	44.604	ENSPFOG00000007919	-	100	50.459
ENSPFOG00000005998	-	57	44.706	ENSPFOG00000010682	-	89	44.706
ENSPFOG00000005998	-	70	39.597	ENSPFOG00000000624	-	99	48.598
ENSPFOG00000005998	-	70	44.037	ENSPFOG00000007847	-	100	47.706
ENSPFOG00000005998	-	57	40.000	ENSPFOG00000022162	-	61	40.476
ENSPFOG00000005998	-	63	40.000	ENSPFOG00000002879	-	99	47.458
ENSPFOG00000005998	-	72	37.324	ENSPFOG00000020455	-	89	45.299
ENSPFOG00000005998	-	97	36.538	ENSPFOG00000009806	-	63	43.925
ENSPFOG00000005998	-	50	38.926	ENSPFOG00000019832	-	50	38.926
ENSPFOG00000005998	-	54	38.776	ENSPFOG00000023590	-	54	46.789
ENSPFOG00000005998	-	72	43.243	ENSPFOG00000018771	-	69	48.750
ENSPFOG00000005998	-	56	42.177	ENSPFOG00000007708	-	96	42.177
ENSPFOG00000005998	-	56	42.254	ENSPFOG00000024204	-	70	47.664
ENSPFOG00000005998	-	73	39.437	ENSPFOG00000024635	-	80	45.946
ENSPFOG00000005998	-	58	38.406	ENSPFOG00000023187	-	64	43.925
ENSPFOG00000005998	-	62	42.593	ENSPFOG00000007333	-	87	42.593
ENSPFOG00000005998	-	55	42.683	ENSPFOG00000018583	-	99	46.988
ENSPFOG00000005998	-	58	50.649	ENSPFOG00000004126	-	61	42.063
ENSPFOG00000005998	-	97	40.523	ENSPFOG00000024642	-	99	50.000
ENSPFOG00000005998	-	72	44.068	ENSPFOG00000020449	-	66	43.796
ENSPFOG00000005998	-	66	44.318	ENSPFOG00000019617	-	58	44.318
ENSPFOG00000005998	-	78	41.781	ENSPFOG00000015553	-	99	49.533
ENSPFOG00000005998	-	52	43.925	ENSPFOG00000024305	-	75	43.925
ENSPFOG00000005998	-	63	40.972	ENSPFOG00000003366	-	68	40.972
ENSPFOG00000005998	-	68	43.902	ENSPFOG00000000774	-	62	47.664
ENSPFOG00000005998	-	73	42.424	ENSPFOG00000022423	-	89	44.444
ENSPFOG00000005998	-	62	50.633	ENSPFOG00000009473	-	100	48.624
ENSPFOG00000005998	-	73	43.802	ENSPFOG00000001310	-	84	51.402
ENSPFOG00000005998	-	91	42.759	ENSPFOG00000018776	-	82	44.954
ENSPFOG00000005998	-	58	49.367	ENSPFOG00000005592	-	100	45.946
ENSPFOG00000005998	-	57	37.931	ENSPFOG00000003377	-	62	41.441
ENSPFOG00000005998	-	66	44.318	ENSPFOG00000008638	-	65	44.860
ENSPFOG00000005998	-	55	40.741	ENSPFOG00000007465	-	89	40.741
ENSPFOG00000005998	-	72	42.029	ENSPFOG00000022426	-	100	49.438
ENSPFOG00000005998	-	70	40.141	ENSPFOG00000010018	-	76	40.141
ENSPFOG00000005998	-	83	47.436	ENSPFOG00000001375	-	65	41.284
ENSPFOG00000005998	-	57	41.104	ENSPFOG00000024183	-	60	48.598
ENSPFOG00000005998	-	76	37.158	ENSPFOG00000022933	-	63	44.882
ENSPFOG00000005998	-	51	38.298	ENSPFOG00000024470	-	73	44.068
ENSPFOG00000005998	-	52	34.932	ENSPFOG00000024692	-	56	41.964
ENSPFOG00000005998	-	58	55.128	ENSPFOG00000001144	-	95	33.136
ENSPFOG00000005998	-	50	53.333	ENSPFOG00000017913	-	52	42.991
ENSPFOG00000005998	-	58	42.029	ENSPFOG00000024133	-	68	44.444
ENSPFOG00000005998	-	92	36.424	ENSPFOG00000023671	-	64	42.742
ENSPFOG00000005998	-	59	43.137	ENSPFOG00000024787	-	74	35.088
ENSPFOG00000005998	-	67	41.212	ENSPFOG00000020393	-	81	41.346

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000005998	-	81	77.528	ENSATEG00000023773	-	61	77.528	Anabas_testudineus
ENSPFOG00000005998	-	89	54.610	ENSCSEG00000011817	-	73	53.901	Cynoglossus_semilaevis
ENSPFOG00000005998	-	78	38.406	ENSDARG00000103244	CABZ01081752.3	79	44.860	Danio_rerio
ENSPFOG00000005998	-	63	40.146	ENSDARG00000098986	znf1040	85	45.946	Danio_rerio
ENSPFOG00000005998	-	54	41.304	ENSDARG00000112725	si:dkey-22h13.2	76	46.000	Danio_rerio
ENSPFOG00000005998	-	52	37.349	ENSDARG00000113808	si:dkeyp-82b4.6	68	45.977	Danio_rerio
ENSPFOG00000005998	-	50	37.037	ENSDARG00000113971	LO018181.1	67	37.037	Danio_rerio
ENSPFOG00000005998	-	63	40.876	ENSDARG00000091994	znf1048	85	45.946	Danio_rerio
ENSPFOG00000005998	-	62	44.954	ENSDARG00000102561	AL645691.1	97	44.954	Danio_rerio
ENSPFOG00000005998	-	50	49.000	ENSDARG00000096189	si:dkey-54j5.2	75	49.000	Danio_rerio
ENSPFOG00000005998	-	58	51.389	ENSDARG00000091477	znf1066	81	51.389	Danio_rerio
ENSPFOG00000005998	-	57	42.268	ENSDARG00000098901	CABZ01002768.1	82	43.243	Danio_rerio
ENSPFOG00000005998	-	50	49.000	ENSDARG00000109381	CU457778.2	75	49.000	Danio_rerio
ENSPFOG00000005998	-	50	50.000	ENSDARG00000098087	si:dkey-30f3.2	79	48.684	Danio_rerio
ENSPFOG00000005998	-	50	52.564	ENSDARG00000105137	zgc:173705	70	44.545	Danio_rerio
ENSPFOG00000005998	-	58	41.304	ENSDARG00000115450	CABZ01012382.1	76	48.000	Danio_rerio
ENSPFOG00000005998	-	64	38.129	ENSDARG00000101327	znf1076	77	43.750	Danio_rerio
ENSPFOG00000005998	-	55	42.446	ENSDARG00000110658	zgc:174696	75	44.144	Danio_rerio
ENSPFOG00000005998	-	63	40.146	ENSDARG00000092938	znf1047	80	45.946	Danio_rerio
ENSPFOG00000005998	-	51	37.589	ENSDARG00000114437	zgc:173705	75	46.364	Danio_rerio
ENSPFOG00000005998	-	61	38.037	ENSDARG00000104407	BX649453.1	91	48.598	Danio_rerio
ENSPFOG00000005998	-	67	58.491	ENSDARG00000099245	CABZ01081752.1	69	59.615	Danio_rerio
ENSPFOG00000005998	-	62	38.172	ENSDARG00000116177	znf1127	72	45.794	Danio_rerio
ENSPFOG00000005998	-	71	41.429	ENSDARG00000100001	znf1096	76	49.000	Danio_rerio
ENSPFOG00000005998	-	55	46.392	ENSDARG00000102008	si:dkey-72l17.6	74	44.037	Danio_rerio
ENSPFOG00000005998	-	51	45.882	ENSDARG00000103721	si:dkey-122c11.7	78	45.882	Danio_rerio
ENSPFOG00000005998	-	57	51.250	ENSDARG00000110229	zgc:173702	77	46.078	Danio_rerio
ENSPFOG00000005998	-	57	39.855	ENSDARG00000102600	CABZ01003344.1	85	45.946	Danio_rerio
ENSPFOG00000005998	-	72	44.286	ENSFHEG00000021020	-	64	53.659	Fundulus_heteroclitus
ENSPFOG00000005998	-	99	74.038	ENSFHEG00000015400	-	66	72.436	Fundulus_heteroclitus
ENSPFOG00000005998	-	96	88.487	ENSGAFG00000013839	-	82	87.171	Gambusia_affinis
ENSPFOG00000005998	-	66	35.971	ENSKMAG00000011441	-	81	37.705	Kryptolebias_marmoratus
ENSPFOG00000005998	-	82	76.087	ENSMAMG00000020468	-	64	76.087	Mastacembelus_armatus
ENSPFOG00000005998	-	84	61.132	ENSNBRG00000019881	-	98	50.459	Neolamprologus_brichardi
ENSPFOG00000005998	-	87	49.265	ENSORLG00015013828	-	85	48.897	Oryzias_latipes_hsok
ENSPFOG00000005998	-	97	51.475	ENSOMEG00000005928	-	97	41.050	Oryzias_melastigma
ENSPFOG00000005998	-	100	99.045	ENSPLAG00000001674	-	67	99.045	Poecilia_latipinna
ENSPFOG00000005998	-	50	47.436	ENSPLAG00000009861	-	52	42.991	Poecilia_latipinna
ENSPFOG00000005998	-	100	98.403	ENSPMEG00000013200	-	67	98.403	Poecilia_mexicana
ENSPFOG00000005998	-	65	35.577	ENSPREG00000005015	-	91	50.459	Poecilia_reticulata
ENSPFOG00000005998	-	89	63.732	ENSSMAG00000002598	-	64	66.304	Scophthalmus_maximus
ENSPFOG00000005998	-	94	61.564	ENSSDUG00000015456	-	60	72.826	Seriola_dumerili
ENSPFOG00000005998	-	93	65.188	ENSSPAG00000017203	-	85	64.505	Stegastes_partitus
ENSPFOG00000005998	-	76	38.356	ENSXETG00000031310	-	53	41.606	Xenopus_tropicalis
ENSPFOG00000005998	-	66	33.766	ENSXCOG00000003499	-	64	47.674	Xiphophorus_couchianus
ENSPFOG00000005998	-	100	89.375	ENSXMAG00000021195	-	62	95.789	Xiphophorus_maculatus