EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000006033 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 16880 bases
Position: chrKI520131.1:262254-279133
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000006029	Ago_hook	PF10427.9	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000006039	-	5094	-	ENSPFOP00000006029	1697 (aa)	-	A0A087XJS6
ENSPFOT00000024302	-	2148	-	ENSPFOP00000022070	453 (aa)	-	A0A096LSC9

Gene Model

Click here to download ENSPFOG00000006033's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000006033's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000006033	-	61	38.400	ENSPFOG00000012560	tnrc6c1	85	30.939

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000006033	-	96	43.891	ENSG00000100354	TNRC6B	92	56.667	Homo_sapiens
ENSPFOG00000006033	-	95	44.096	ENSAMEG00000011025	TNRC6B	91	42.644	Ailuropoda_melanoleuca
ENSPFOG00000006033	-	98	38.474	ENSAPLG00000009347	TNRC6B	54	49.325	Anas_platyrhynchos
ENSPFOG00000006033	-	80	44.096	ENSANAG00000035042	TNRC6B	92	56.667	Aotus_nancymaae
ENSPFOG00000006033	-	69	61.050	ENSAMXG00000008707	tnrc6b	90	60.638	Astyanax_mexicanus
ENSPFOG00000006033	-	54	50.733	ENSBTAG00000021076	TNRC6B	69	49.701	Bos_taurus
ENSPFOG00000006033	-	58	54.639	ENSCJAG00000002732	TNRC6B	94	56.180	Callithrix_jacchus
ENSPFOG00000006033	-	95	44.005	ENSCAFG00000001255	TNRC6B	91	42.336	Canis_familiaris
ENSPFOG00000006033	-	94	42.466	ENSCAFG00020002189	TNRC6B	88	41.667	Canis_lupus_dingo
ENSPFOG00000006033	-	97	42.368	ENSCHIG00000003491	TNRC6B	70	49.625	Capra_hircus
ENSPFOG00000006033	-	59	54.639	ENSTSYG00000011836	TNRC6B	93	56.667	Carlito_syrichta
ENSPFOG00000006033	-	96	42.435	ENSCPOG00000005705	TNRC6B	99	39.117	Cavia_porcellus
ENSPFOG00000006033	-	96	42.760	ENSCCAG00000019912	TNRC6B	92	56.667	Cebus_capucinus
ENSPFOG00000006033	-	96	43.306	ENSCATG00000029291	TNRC6B	92	56.667	Cercocebus_atys
ENSPFOG00000006033	-	95	42.877	ENSCLAG00000016942	TNRC6B	93	38.967	Chinchilla_lanigera
ENSPFOG00000006033	-	96	39.521	ENSCSAG00000006021	TNRC6B	92	41.910	Chlorocebus_sabaeus
ENSPFOG00000006033	-	91	39.475	ENSCPBG00000022932	TNRC6B	93	47.202	Chrysemys_picta_bellii
ENSPFOG00000006033	-	96	43.784	ENSCANG00000030776	TNRC6B	92	56.667	Colobus_angolensis_palliatus
ENSPFOG00000006033	-	91	41.769	ENSCGRG00001020166	Tnrc6b	67	46.225	Cricetulus_griseus_chok1gshd
ENSPFOG00000006033	-	95	42.112	ENSCGRG00000016696	Tnrc6b	69	45.927	Cricetulus_griseus_crigri
ENSPFOG00000006033	-	98	42.330	ENSDNOG00000012744	TNRC6B	98	42.159	Dasypus_novemcinctus
ENSPFOG00000006033	-	91	48.534	ENSDORG00000003386	Tnrc6b	67	46.365	Dipodomys_ordii
ENSPFOG00000006033	-	80	35.724	ENSETEG00000006570	TNRC6B	80	39.941	Echinops_telfairi
ENSPFOG00000006033	-	99	39.789	ENSEASG00005005306	TNRC6B	95	39.206	Equus_asinus_asinus
ENSPFOG00000006033	-	53	50.954	ENSECAG00000009759	TNRC6B	90	59.574	Equus_caballus
ENSPFOG00000006033	-	56	70.909	ENSEEUG00000008690	-	53	82.927	Erinaceus_europaeus
ENSPFOG00000006033	-	53	50.511	ENSFCAG00000004791	TNRC6B	70	48.783	Felis_catus
ENSPFOG00000006033	-	97	39.664	ENSFALG00000012195	TNRC6B	99	39.572	Ficedula_albicollis
ENSPFOG00000006033	-	54	50.223	ENSFDAG00000021368	TNRC6B	97	39.208	Fukomys_damarensis
ENSPFOG00000006033	-	93	49.763	ENSGALG00000012050	TNRC6B	97	49.919	Gallus_gallus
ENSPFOG00000006033	-	99	40.255	ENSGAGG00000025188	TNRC6B	75	49.474	Gopherus_agassizii
ENSPFOG00000006033	-	96	43.891	ENSGGOG00000008444	TNRC6B	92	56.667	Gorilla_gorilla
ENSPFOG00000006033	-	96	43.549	ENSHGLG00000009306	TNRC6B	99	39.358	Heterocephalus_glaber_female
ENSPFOG00000006033	-	96	42.700	ENSHGLG00100018108	TNRC6B	97	38.686	Heterocephalus_glaber_male
ENSPFOG00000006033	-	96	54.695	ENSIPUG00000001515	tnrc6b	89	54.773	Ictalurus_punctatus
ENSPFOG00000006033	-	95	42.593	ENSSTOG00000008927	TNRC6B	90	46.139	Ictidomys_tridecemlineatus
ENSPFOG00000006033	-	80	42.326	ENSJJAG00000015779	Tnrc6b	68	49.700	Jaculus_jaculus
ENSPFOG00000006033	-	54	40.643	ENSLACG00000000628	-	50	41.509	Latimeria_chalumnae
ENSPFOG00000006033	-	58	49.808	ENSLAFG00000014473	TNRC6B	99	44.913	Loxodonta_africana
ENSPFOG00000006033	-	96	43.238	ENSMFAG00000003862	TNRC6B	92	56.667	Macaca_fascicularis
ENSPFOG00000006033	-	98	40.937	ENSMMUG00000021345	TNRC6B	92	56.667	Macaca_mulatta
ENSPFOG00000006033	-	96	42.192	ENSMNEG00000042745	TNRC6B	91	45.712	Macaca_nemestrina
ENSPFOG00000006033	-	96	43.784	ENSMLEG00000041780	TNRC6B	92	56.667	Mandrillus_leucophaeus
ENSPFOG00000006033	-	99	41.249	ENSMGAG00000012333	TNRC6B	99	38.477	Meleagris_gallopavo
ENSPFOG00000006033	-	80	42.445	ENSMAUG00000016123	Tnrc6b	68	49.551	Mesocricetus_auratus
ENSPFOG00000006033	-	96	40.289	ENSMICG00000014056	TNRC6B	93	56.667	Microcebus_murinus
ENSPFOG00000006033	-	93	58.257	ENSMOCG00000020334	Tnrc6b	68	58.511	Microtus_ochrogaster
ENSPFOG00000006033	-	65	93.548	ENSMMOG00000002799	si:dkey-217f16.6	92	94.286	Mola_mola
ENSPFOG00000006033	-	95	41.684	MGP_CAROLIEiJ_G0020043	Tnrc6b	67	45.472	Mus_caroli
ENSPFOG00000006033	-	95	42.102	ENSMUSG00000047888	Tnrc6b	89	43.830	Mus_musculus
ENSPFOG00000006033	-	95	41.964	MGP_PahariEiJ_G0020045	Tnrc6b	67	45.597	Mus_pahari
ENSPFOG00000006033	-	95	43.759	MGP_SPRETEiJ_G0020941	Tnrc6b	68	48.970	Mus_spretus
ENSPFOG00000006033	-	92	51.812	ENSMPUG00000016442	TNRC6B	91	40.275	Mustela_putorius_furo
ENSPFOG00000006033	-	95	43.806	ENSMLUG00000008765	TNRC6B	70	48.577	Myotis_lucifugus
ENSPFOG00000006033	-	96	43.132	ENSNGAG00000021294	Tnrc6b	69	46.327	Nannospalax_galili
ENSPFOG00000006033	-	58	54.639	ENSNLEG00000015311	TNRC6B	92	56.667	Nomascus_leucogenys
ENSPFOG00000006033	-	65	51.449	ENSOPRG00000012054	TNRC6B	78	53.226	Ochotona_princeps
ENSPFOG00000006033	-	96	42.641	ENSODEG00000013146	TNRC6B	97	39.289	Octodon_degus
ENSPFOG00000006033	-	99	61.070	ENSONIG00000019679	-	99	63.534	Oreochromis_niloticus
ENSPFOG00000006033	-	53	50.808	ENSOCUG00000016128	TNRC6B	89	40.903	Oryctolagus_cuniculus
ENSPFOG00000006033	-	96	43.549	ENSOGAG00000011096	TNRC6B	92	48.299	Otolemur_garnettii
ENSPFOG00000006033	-	97	42.059	ENSOARG00000017238	TNRC6B	69	49.183	Ovis_aries
ENSPFOG00000006033	-	96	43.959	ENSPPAG00000028514	TNRC6B	93	56.667	Pan_paniscus
ENSPFOG00000006033	-	58	53.333	ENSPPRG00000017741	TNRC6B	95	52.555	Panthera_pardus
ENSPFOG00000006033	-	96	41.160	ENSPTIG00000022064	TNRC6B	88	65.517	Panthera_tigris_altaica
ENSPFOG00000006033	-	96	43.823	ENSPTRG00000047826	TNRC6B	92	56.667	Pan_troglodytes
ENSPFOG00000006033	-	92	44.575	ENSPANG00000009271	TNRC6B	77	82.927	Papio_anubis
ENSPFOG00000006033	-	99	36.006	ENSPSIG00000005318	TNRC6B	76	48.054	Pelodiscus_sinensis
ENSPFOG00000006033	-	95	42.416	ENSPEMG00000011403	Tnrc6b	69	46.244	Peromyscus_maniculatus_bairdii
ENSPFOG00000006033	-	53	49.706	ENSPCIG00000020347	TNRC6B	69	47.652	Phascolarctos_cinereus
ENSPFOG00000006033	-	67	90.074	ENSPLAG00000001418	-	97	80.705	Poecilia_latipinna
ENSPFOG00000006033	-	85	89.000	ENSPMEG00000006371	-	93	89.000	Poecilia_mexicana
ENSPFOG00000006033	-	96	41.116	ENSPPYG00000011849	TNRC6B	79	50.075	Pongo_abelii
ENSPFOG00000006033	-	66	40.549	ENSPCAG00000008739	TNRC6B	61	40.942	Procavia_capensis
ENSPFOG00000006033	-	96	40.358	ENSPCOG00000020790	TNRC6B	93	56.667	Propithecus_coquereli
ENSPFOG00000006033	-	81	44.591	ENSPVAG00000004975	TNRC6B	83	42.721	Pteropus_vampyrus
ENSPFOG00000006033	-	95	41.814	ENSRNOG00000024907	Tnrc6b	50	45.005	Rattus_norvegicus
ENSPFOG00000006033	-	58	54.639	ENSRBIG00000035576	TNRC6B	93	56.667	Rhinopithecus_bieti
ENSPFOG00000006033	-	58	54.639	ENSRROG00000031135	TNRC6B	92	56.667	Rhinopithecus_roxellana
ENSPFOG00000006033	-	95	43.754	ENSSBOG00000029743	TNRC6B	87	82.927	Saimiri_boliviensis_boliviensis
ENSPFOG00000006033	-	54	70.909	ENSSARG00000007971	-	52	82.927	Sorex_araneus
ENSPFOG00000006033	-	53	50.808	ENSSSCG00000000078	TNRC6B	90	48.826	Sus_scrofa
ENSPFOG00000006033	-	81	45.721	ENSTGUG00000010138	-	95	37.939	Taeniopygia_guttata
ENSPFOG00000006033	-	50	50.949	ENSTTRG00000011465	TNRC6B	50	50.927	Tursiops_truncatus
ENSPFOG00000006033	-	96	42.486	ENSUAMG00000007174	TNRC6B	94	39.291	Ursus_americanus
ENSPFOG00000006033	-	95	42.486	ENSUMAG00000014336	TNRC6B	91	41.564	Ursus_maritimus
ENSPFOG00000006033	-	62	40.284	ENSVPAG00000001467	TNRC6B	59	39.929	Vicugna_pacos
ENSPFOG00000006033	-	89	51.181	ENSVVUG00000007064	TNRC6B	97	42.336	Vulpes_vulpes
ENSPFOG00000006033	-	59	90.248	ENSXCOG00000003042	-	98	79.536	Xiphophorus_couchianus