EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000006077 (Gene tree)
Gene ID: 103135683
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 23974 bases
Position: chrKI519612.1:1108591-1132564
Accession: ZDB-GENE-180313-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000005975	R3H	PF01424.22	8.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000005984	-	4576	-	ENSPFOP00000005975	1063 (aa)	-	A0A087XJM2

Gene Model

Click here to download ENSPFOG00000006077's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000006077's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000006077	r3hdm2	77	57.593	ENSPFOG00000015036	r3hdm1	62	57.925

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000006077	r3hdm2	98	73.158	ENSG00000179912	R3HDM2	94	71.316	Homo_sapiens
ENSPFOG00000006077	r3hdm2	92	91.738	ENSAPOG00000020341	r3hdm2	94	83.255	Acanthochromis_polyacanthus
ENSPFOG00000006077	r3hdm2	99	45.863	ENSAMEG00000004812	R3HDM2	95	45.298	Ailuropoda_melanoleuca
ENSPFOG00000006077	r3hdm2	92	87.480	ENSACIG00000016146	r3hdm2	98	87.322	Amphilophus_citrinellus
ENSPFOG00000006077	r3hdm2	92	96.866	ENSAOCG00000023694	r3hdm2	94	93.011	Amphiprion_ocellaris
ENSPFOG00000006077	r3hdm2	92	91.738	ENSAPEG00000008851	r3hdm2	99	86.040	Amphiprion_percula
ENSPFOG00000006077	r3hdm2	92	91.453	ENSATEG00000025024	r3hdm2	99	66.603	Anabas_testudineus
ENSPFOG00000006077	r3hdm2	99	61.187	ENSAPLG00000004298	R3HDM2	95	60.603	Anas_platyrhynchos
ENSPFOG00000006077	r3hdm2	98	56.498	ENSACAG00000006388	R3HDM2	94	45.430	Anolis_carolinensis
ENSPFOG00000006077	r3hdm2	95	73.421	ENSANAG00000025397	-	94	73.158	Aotus_nancymaae
ENSPFOG00000006077	r3hdm2	95	68.947	ENSANAG00000031310	-	96	67.368	Aotus_nancymaae
ENSPFOG00000006077	r3hdm2	98	82.126	ENSACLG00000019106	r3hdm2	94	82.408	Astatotilapia_calliptera
ENSPFOG00000006077	r3hdm2	92	81.792	ENSAMXG00000017180	r3hdm2	99	81.792	Astyanax_mexicanus
ENSPFOG00000006077	r3hdm2	98	72.632	ENSBTAG00000018361	R3HDM2	94	70.789	Bos_taurus
ENSPFOG00000006077	r3hdm2	98	73.421	ENSCJAG00000007365	R3HDM2	94	72.895	Callithrix_jacchus
ENSPFOG00000006077	r3hdm2	98	73.158	ENSCAFG00000000215	R3HDM2	94	71.316	Canis_familiaris
ENSPFOG00000006077	r3hdm2	94	73.740	ENSCAFG00020023713	R3HDM2	94	81.019	Canis_lupus_dingo
ENSPFOG00000006077	r3hdm2	98	72.632	ENSCHIG00000014022	R3HDM2	94	70.789	Capra_hircus
ENSPFOG00000006077	r3hdm2	98	72.368	ENSTSYG00000001449	R3HDM2	94	72.368	Carlito_syrichta
ENSPFOG00000006077	r3hdm2	94	78.426	ENSCPOG00000009217	R3HDM2	94	75.510	Cavia_porcellus
ENSPFOG00000006077	r3hdm2	83	73.421	ENSCCAG00000026083	R3HDM2	93	71.579	Cebus_capucinus
ENSPFOG00000006077	r3hdm2	95	73.158	ENSCATG00000036929	R3HDM2	94	71.316	Cercocebus_atys
ENSPFOG00000006077	r3hdm2	95	77.810	ENSCLAG00000011997	R3HDM2	94	75.216	Chinchilla_lanigera
ENSPFOG00000006077	r3hdm2	99	60.374	ENSCSAG00000004911	R3HDM2	94	71.316	Chlorocebus_sabaeus
ENSPFOG00000006077	r3hdm2	63	71.579	ENSCHOG00000005636	R3HDM2	76	71.579	Choloepus_hoffmanni
ENSPFOG00000006077	r3hdm2	99	56.947	ENSCPBG00000013922	R3HDM2	94	54.128	Chrysemys_picta_bellii
ENSPFOG00000006077	r3hdm2	95	73.158	ENSCANG00000043807	R3HDM2	94	71.316	Colobus_angolensis_palliatus
ENSPFOG00000006077	r3hdm2	98	71.088	ENSCGRG00001017324	R3hdm2	94	69.231	Cricetulus_griseus_chok1gshd
ENSPFOG00000006077	r3hdm2	98	66.578	ENSCGRG00000003862	R3hdm2	94	66.578	Cricetulus_griseus_crigri
ENSPFOG00000006077	r3hdm2	92	93.220	ENSCSEG00000010925	r3hdm2	94	93.220	Cynoglossus_semilaevis
ENSPFOG00000006077	r3hdm2	92	96.056	ENSCVAG00000009058	r3hdm2	100	90.967	Cyprinodon_variegatus
ENSPFOG00000006077	r3hdm2	91	89.676	ENSDARG00000102610	r3hdm2	99	86.431	Danio_rerio
ENSPFOG00000006077	r3hdm2	90	75.251	ENSDNOG00000015033	R3HDM2	100	72.910	Dasypus_novemcinctus
ENSPFOG00000006077	r3hdm2	95	72.334	ENSDORG00000011462	R3hdm2	99	72.334	Dipodomys_ordii
ENSPFOG00000006077	r3hdm2	98	73.158	ENSEASG00005007091	R3HDM2	94	71.316	Equus_asinus_asinus
ENSPFOG00000006077	r3hdm2	98	73.158	ENSECAG00000003157	R3HDM2	94	71.316	Equus_caballus
ENSPFOG00000006077	r3hdm2	81	86.592	ENSELUG00000015969	r3hdm2	97	76.355	Esox_lucius
ENSPFOG00000006077	r3hdm2	96	76.579	ENSFCAG00000000192	R3HDM2	90	71.316	Felis_catus
ENSPFOG00000006077	r3hdm2	84	57.563	ENSFALG00000000255	R3HDM2	93	54.466	Ficedula_albicollis
ENSPFOG00000006077	r3hdm2	94	78.134	ENSFDAG00000019385	R3HDM2	94	75.802	Fukomys_damarensis
ENSPFOG00000006077	r3hdm2	98	85.005	ENSFHEG00000016484	r3hdm2	94	87.274	Fundulus_heteroclitus
ENSPFOG00000006077	r3hdm2	98	60.589	ENSGMOG00000007961	r3hdm2	99	70.860	Gadus_morhua
ENSPFOG00000006077	r3hdm2	92	75.499	ENSGALG00000043736	R3HDM2	81	73.219	Gallus_gallus
ENSPFOG00000006077	r3hdm2	98	85.000	ENSGAFG00000013887	r3hdm2	99	83.126	Gambusia_affinis
ENSPFOG00000006077	r3hdm2	98	80.875	ENSGACG00000006442	r3hdm2	99	81.043	Gasterosteus_aculeatus
ENSPFOG00000006077	r3hdm2	99	56.450	ENSGAGG00000017797	R3HDM2	92	73.352	Gopherus_agassizii
ENSPFOG00000006077	r3hdm2	98	73.158	ENSGGOG00000015007	R3HDM2	94	71.316	Gorilla_gorilla
ENSPFOG00000006077	r3hdm2	94	72.886	ENSHGLG00000010434	-	94	75.802	Heterocephalus_glaber_female
ENSPFOG00000006077	r3hdm2	88	74.315	ENSHGLG00000010421	-	97	71.959	Heterocephalus_glaber_female
ENSPFOG00000006077	r3hdm2	91	72.595	ENSHGLG00100018871	-	95	71.720	Heterocephalus_glaber_male
ENSPFOG00000006077	r3hdm2	94	78.134	ENSHGLG00100004183	-	94	75.802	Heterocephalus_glaber_male
ENSPFOG00000006077	r3hdm2	88	91.014	ENSHCOG00000001142	r3hdm2	91	78.612	Hippocampus_comes
ENSPFOG00000006077	r3hdm2	93	85.042	ENSIPUG00000023873	r3hdm2	94	82.271	Ictalurus_punctatus
ENSPFOG00000006077	r3hdm2	95	70.605	ENSSTOG00000013424	R3HDM2	94	70.605	Ictidomys_tridecemlineatus
ENSPFOG00000006077	r3hdm2	95	71.758	ENSJJAG00000010001	R3hdm2	94	71.758	Jaculus_jaculus
ENSPFOG00000006077	r3hdm2	93	94.247	ENSKMAG00000012695	r3hdm2	92	94.247	Kryptolebias_marmoratus
ENSPFOG00000006077	r3hdm2	88	90.625	ENSLBEG00000013115	r3hdm2	90	90.196	Labrus_bergylta
ENSPFOG00000006077	r3hdm2	93	83.425	ENSLOCG00000005976	r3hdm2	94	66.383	Lepisosteus_oculatus
ENSPFOG00000006077	r3hdm2	99	46.522	ENSLAFG00000006510	R3HDM2	95	46.035	Loxodonta_africana
ENSPFOG00000006077	r3hdm2	95	73.158	ENSMFAG00000036385	R3HDM2	94	71.316	Macaca_fascicularis
ENSPFOG00000006077	r3hdm2	95	73.158	ENSMMUG00000021789	R3HDM2	95	76.579	Macaca_mulatta
ENSPFOG00000006077	r3hdm2	95	73.158	ENSMNEG00000025314	R3HDM2	94	71.316	Macaca_nemestrina
ENSPFOG00000006077	r3hdm2	95	73.158	ENSMLEG00000028915	R3HDM2	94	71.316	Mandrillus_leucophaeus
ENSPFOG00000006077	r3hdm2	92	95.493	ENSMAMG00000009793	r3hdm2	94	95.493	Mastacembelus_armatus
ENSPFOG00000006077	r3hdm2	98	82.126	ENSMZEG00005007319	r3hdm2	94	82.408	Maylandia_zebra
ENSPFOG00000006077	r3hdm2	98	73.158	ENSMICG00000012389	R3HDM2	94	71.316	Microcebus_murinus
ENSPFOG00000006077	r3hdm2	98	71.088	ENSMOCG00000014425	R3hdm2	94	69.231	Microtus_ochrogaster
ENSPFOG00000006077	r3hdm2	94	84.494	ENSMMOG00000007448	r3hdm2	100	83.379	Mola_mola
ENSPFOG00000006077	r3hdm2	87	81.411	ENSMALG00000010211	r3hdm2	97	83.932	Monopterus_albus
ENSPFOG00000006077	r3hdm2	95	76.081	MGP_CAROLIEiJ_G0015896	R3hdm2	94	74.063	Mus_caroli
ENSPFOG00000006077	r3hdm2	95	76.369	ENSMUSG00000025404	R3hdm2	95	80.115	Mus_musculus
ENSPFOG00000006077	r3hdm2	95	76.369	MGP_PahariEiJ_G0031189	R3hdm2	94	74.352	Mus_pahari
ENSPFOG00000006077	r3hdm2	95	76.369	MGP_SPRETEiJ_G0016722	R3hdm2	95	75.263	Mus_spretus
ENSPFOG00000006077	r3hdm2	97	45.354	ENSMPUG00000001818	R3HDM2	91	44.547	Mustela_putorius_furo
ENSPFOG00000006077	r3hdm2	99	61.798	ENSMLUG00000004980	R3HDM2	95	60.354	Myotis_lucifugus
ENSPFOG00000006077	r3hdm2	95	77.522	ENSNGAG00000018800	R3hdm2	94	75.504	Nannospalax_galili
ENSPFOG00000006077	r3hdm2	79	93.925	ENSNBRG00000004483	r3hdm2	99	88.748	Neolamprologus_brichardi
ENSPFOG00000006077	r3hdm2	98	73.158	ENSNLEG00000017351	R3HDM2	94	71.316	Nomascus_leucogenys
ENSPFOG00000006077	r3hdm2	97	63.852	ENSMEUG00000008588	R3HDM2	94	63.325	Notamacropus_eugenii
ENSPFOG00000006077	r3hdm2	92	71.182	ENSOPRG00000013670	R3HDM2	93	71.182	Ochotona_princeps
ENSPFOG00000006077	r3hdm2	99	45.871	ENSOCUG00000013258	R3HDM2	95	45.290	Oryctolagus_cuniculus
ENSPFOG00000006077	r3hdm2	92	90.704	ENSORLG00000005502	r3hdm2	91	87.606	Oryzias_latipes
ENSPFOG00000006077	r3hdm2	92	95.211	ENSORLG00020017069	r3hdm2	94	95.211	Oryzias_latipes_hni
ENSPFOG00000006077	r3hdm2	92	95.211	ENSORLG00015012735	r3hdm2	94	95.211	Oryzias_latipes_hsok
ENSPFOG00000006077	r3hdm2	94	83.994	ENSOMEG00000018079	r3hdm2	93	83.677	Oryzias_melastigma
ENSPFOG00000006077	r3hdm2	95	53.016	ENSOGAG00000027966	-	94	50.536	Otolemur_garnettii
ENSPFOG00000006077	r3hdm2	99	58.912	ENSOGAG00000012055	R3HDM2	94	57.746	Otolemur_garnettii
ENSPFOG00000006077	r3hdm2	98	72.632	ENSOARG00000006929	R3HDM2	94	70.789	Ovis_aries
ENSPFOG00000006077	r3hdm2	98	73.158	ENSPPAG00000034395	R3HDM2	94	71.316	Pan_paniscus
ENSPFOG00000006077	r3hdm2	98	73.158	ENSPPRG00000009240	R3HDM2	94	71.316	Panthera_pardus
ENSPFOG00000006077	r3hdm2	98	73.158	ENSPTIG00000008752	R3HDM2	94	71.316	Panthera_tigris_altaica
ENSPFOG00000006077	r3hdm2	98	73.158	ENSPTRG00000046457	R3HDM2	94	71.316	Pan_troglodytes
ENSPFOG00000006077	r3hdm2	95	73.158	ENSPANG00000024002	R3HDM2	97	71.316	Papio_anubis
ENSPFOG00000006077	r3hdm2	93	86.389	ENSPKIG00000003171	r3hdm2	96	78.063	Paramormyrops_kingsleyae
ENSPFOG00000006077	r3hdm2	92	90.517	ENSPMGG00000007061	r3hdm2	99	81.775	Periophthalmus_magnuspinnatus
ENSPFOG00000006077	r3hdm2	93	74.586	ENSPEMG00000015964	R3hdm2	94	71.823	Peromyscus_maniculatus_bairdii
ENSPFOG00000006077	r3hdm2	92	76.385	ENSPCIG00000023841	R3HDM2	94	69.657	Phascolarctos_cinereus
ENSPFOG00000006077	r3hdm2	98	86.819	ENSPLAG00000002971	r3hdm2	99	83.988	Poecilia_latipinna
ENSPFOG00000006077	r3hdm2	98	86.819	ENSPMEG00000005330	r3hdm2	99	83.988	Poecilia_mexicana
ENSPFOG00000006077	r3hdm2	92	94.295	ENSPREG00000008424	r3hdm2	99	94.006	Poecilia_reticulata
ENSPFOG00000006077	r3hdm2	97	54.677	ENSPPYG00000004685	R3HDM2	76	68.421	Pongo_abelii
ENSPFOG00000006077	r3hdm2	86	79.643	ENSPCAG00000014642	R3HDM2	92	79.643	Procavia_capensis
ENSPFOG00000006077	r3hdm2	98	73.158	ENSPCOG00000013201	R3HDM2	94	72.632	Propithecus_coquereli
ENSPFOG00000006077	r3hdm2	99	61.905	ENSPVAG00000003967	R3HDM2	95	60.845	Pteropus_vampyrus
ENSPFOG00000006077	r3hdm2	93	91.413	ENSPNAG00000017473	r3hdm2	94	91.413	Pygocentrus_nattereri
ENSPFOG00000006077	r3hdm2	95	75.216	ENSRNOG00000007801	R3hdm2	94	73.199	Rattus_norvegicus
ENSPFOG00000006077	r3hdm2	95	73.158	ENSRBIG00000037403	R3HDM2	94	71.316	Rhinopithecus_bieti
ENSPFOG00000006077	r3hdm2	95	73.158	ENSRROG00000022271	R3HDM2	94	71.316	Rhinopithecus_roxellana
ENSPFOG00000006077	r3hdm2	95	73.421	ENSSBOG00000023547	R3HDM2	94	71.579	Saimiri_boliviensis_boliviensis
ENSPFOG00000006077	r3hdm2	98	60.432	ENSSHAG00000003511	R3HDM2	93	69.792	Sarcophilus_harrisii
ENSPFOG00000006077	r3hdm2	92	85.057	ENSSFOG00015011219	r3hdm2	99	83.621	Scleropages_formosus
ENSPFOG00000006077	r3hdm2	92	87.520	ENSSMAG00000012073	r3hdm2	99	87.184	Scophthalmus_maximus
ENSPFOG00000006077	r3hdm2	92	91.453	ENSSDUG00000019269	r3hdm2	100	88.661	Seriola_dumerili
ENSPFOG00000006077	r3hdm2	92	96.296	ENSSLDG00000005252	r3hdm2	99	88.626	Seriola_lalandi_dorsalis
ENSPFOG00000006077	r3hdm2	88	59.520	ENSSARG00000003958	R3HDM2	89	56.923	Sorex_araneus
ENSPFOG00000006077	r3hdm2	99	55.912	ENSSPUG00000014132	R3HDM2	94	68.325	Sphenodon_punctatus
ENSPFOG00000006077	r3hdm2	92	91.738	ENSSPAG00000022594	r3hdm2	99	85.624	Stegastes_partitus
ENSPFOG00000006077	r3hdm2	98	73.158	ENSSSCG00000026498	R3HDM2	94	71.316	Sus_scrofa
ENSPFOG00000006077	r3hdm2	71	60.700	ENSTGUG00000015881	R3HDM2	82	79.202	Taeniopygia_guttata
ENSPFOG00000006077	r3hdm2	94	86.234	ENSTRUG00000015075	r3hdm2	99	85.601	Takifugu_rubripes
ENSPFOG00000006077	r3hdm2	100	78.368	ENSTNIG00000007057	r3hdm2	100	77.932	Tetraodon_nigroviridis
ENSPFOG00000006077	r3hdm2	77	64.626	ENSTBEG00000015967	R3HDM2	74	64.286	Tupaia_belangeri
ENSPFOG00000006077	r3hdm2	86	75.462	ENSTTRG00000013082	R3HDM2	76	75.462	Tursiops_truncatus
ENSPFOG00000006077	r3hdm2	92	77.522	ENSUAMG00000020913	R3HDM2	94	75.504	Ursus_americanus
ENSPFOG00000006077	r3hdm2	91	78.947	ENSUMAG00000019179	R3HDM2	92	84.971	Ursus_maritimus
ENSPFOG00000006077	r3hdm2	87	80.333	ENSVPAG00000008656	R3HDM2	87	81.139	Vicugna_pacos
ENSPFOG00000006077	r3hdm2	86	73.158	ENSVVUG00000018014	R3HDM2	91	71.316	Vulpes_vulpes
ENSPFOG00000006077	r3hdm2	99	56.468	ENSXETG00000017153	r3hdm2	94	76.012	Xenopus_tropicalis
ENSPFOG00000006077	r3hdm2	91	82.286	ENSXCOG00000013882	r3hdm2	100	82.286	Xiphophorus_couchianus
ENSPFOG00000006077	r3hdm2	98	87.870	ENSXMAG00000017978	r3hdm2	100	82.286	Xiphophorus_maculatus