EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000006104 (Gene tree)
Gene ID: 103141984
Gene Symbol: -
Alias: -
Full Name: RNA exonuclease 1 homolog
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 13514 bases
Position: chrKI519702.1:663960-677473
Accession: 103141984
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000025144	RNase_T	PF00929.24	1.2e-06	1	1
ENSPFOP00000006035	RNase_T	PF00929.24	1.3e-06	1	1
ENSPFOP00000026539	RNase_T	PF00929.24	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000031388	-	4530	-	ENSPFOP00000026539	994 (aa)	-	A0A096M548
ENSPFOT00000006045	-	4929	-	ENSPFOP00000006035	1127 (aa)	XP_016529705	A0A087XJT2
ENSPFOT00000029168	-	4692	-	ENSPFOP00000025144	1048 (aa)	-	A0A096M153

Gene Model

Click here to download ENSPFOG00000006104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000006104's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000006104	-	71	75.122	ENSAPOG00000005095	zgc:152968	87	73.735	Acanthochromis_polyacanthus
ENSPFOG00000006104	-	87	77.831	ENSACIG00000002527	zgc:152968	99	77.831	Amphilophus_citrinellus
ENSPFOG00000006104	-	100	54.431	ENSAOCG00000018049	-	98	71.084	Amphiprion_ocellaris
ENSPFOG00000006104	-	95	50.567	ENSAPEG00000012559	zgc:152968	99	50.653	Amphiprion_percula
ENSPFOG00000006104	-	90	79.805	ENSACLG00000020524	-	97	79.902	Astatotilapia_calliptera
ENSPFOG00000006104	-	85	87.129	ENSCVAG00000015400	zgc:152968	99	87.129	Cyprinodon_variegatus
ENSPFOG00000006104	-	83	50.872	ENSDARG00000037002	zgc:152968	72	49.284	Danio_rerio
ENSPFOG00000006104	-	81	65.101	ENSELUG00000014272	zgc:152968	68	65.101	Esox_lucius
ENSPFOG00000006104	-	100	67.577	ENSFHEG00000003641	-	100	75.000	Fundulus_heteroclitus
ENSPFOG00000006104	-	99	93.622	ENSGAFG00000016810	-	94	96.729	Gambusia_affinis
ENSPFOG00000006104	-	97	55.046	ENSHBUG00000007524	-	98	54.303	Haplochromis_burtoni
ENSPFOG00000006104	-	68	64.390	ENSIPUG00000004633	zgc:152968	79	63.835	Ictalurus_punctatus
ENSPFOG00000006104	-	85	68.008	ENSLBEG00000026485	zgc:152968	73	68.008	Labrus_bergylta
ENSPFOG00000006104	-	88	64.780	ENSMAMG00000005920	-	100	47.233	Mastacembelus_armatus
ENSPFOG00000006104	-	90	78.832	ENSMZEG00005013783	-	100	78.832	Maylandia_zebra
ENSPFOG00000006104	-	85	79.024	ENSMMOG00000018072	zgc:152968	99	79.024	Mola_mola
ENSPFOG00000006104	-	73	76.049	ENSMALG00000003536	-	82	67.692	Monopterus_albus
ENSPFOG00000006104	-	99	76.233	ENSONIG00000016897	-	99	74.781	Oreochromis_niloticus
ENSPFOG00000006104	-	74	78.079	ENSORLG00020012504	-	88	64.000	Oryzias_latipes_hni
ENSPFOG00000006104	-	69	76.355	ENSOMEG00000008840	-	83	76.355	Oryzias_melastigma
ENSPFOG00000006104	-	99	97.722	ENSPLAG00000005034	-	100	96.190	Poecilia_latipinna
ENSPFOG00000006104	-	100	100.000	ENSPMEG00000018012	-	100	98.314	Poecilia_mexicana
ENSPFOG00000006104	-	100	91.038	ENSPREG00000007481	-	100	91.038	Poecilia_reticulata
ENSPFOG00000006104	-	64	47.059	ENSSFOG00015023869	zgc:152968	62	61.408	Scleropages_formosus
ENSPFOG00000006104	-	100	76.364	ENSSMAG00000008149	-	100	53.985	Scophthalmus_maximus
ENSPFOG00000006104	-	84	79.756	ENSSDUG00000022323	-	96	79.756	Seriola_dumerili
ENSPFOG00000006104	-	85	79.707	ENSSLDG00000018799	zgc:152968	95	79.707	Seriola_lalandi_dorsalis
ENSPFOG00000006104	-	85	73.423	ENSSPAG00000007632	-	95	73.423	Stegastes_partitus
ENSPFOG00000006104	-	95	76.399	ENSTRUG00000025441	zgc:152968	91	72.483	Takifugu_rubripes
ENSPFOG00000006104	-	99	93.636	ENSXMAG00000026483	-	100	89.311	Xiphophorus_maculatus